RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C ARA2Q04212 335 aa5.42□□□□□ -1.54
VPS1YKR001C VBA4Q04602 768 aaKnown RBP5.42□□□□□ -1.54
VPS1YKR001C SWF1Q04629 336 aa5.42□□□□□ -1.54
VPS1YKR001C HCR1Q05775 265 aaKnown RBP5.42□□□□□ -1.54
VPS1YKR001C BOP2Q06150 570 aa5.42□□□□□ -1.54
VPS1YKR001C YPR147CQ06522 304 aaKnown RBP5.42□□□□□ -1.54
VPS1YKR001C RIM20Q12033 661 aa5.42□□□□□ -1.54
VPS1YKR001C LEU9Q12166 604 aaKnown RBP5.42□□□□□ -1.54
VPS1YKR001C LEU4P06208 619 aaKnown RBP5.42□□□□□ -1.54
VPS1YKR001C MRPL33P20084 86 aa5.42□□□□□ -1.54
VPS1YKR001C BET2P20133 325 aa5.42□□□□□ -1.54
VPS1YKR001C AMD2P22580 549 aa5.42□□□□□ -1.54
VPS1YKR001C EMC1P25574 760 aa5.42□□□□□ -1.54
VPS1YKR001C ADK2P26364 225 aa5.42□□□□□ -1.54
VPS1YKR001C KIP1P28742 1111 aa5.42□□□□□ -1.54
VPS1YKR001C VAM7P32912 316 aa5.42□□□□□ -1.54
VPS1YKR001C CTF13P35203 478 aa5.42□□□□□ -1.54
VPS1YKR001C ELF1P36053 145 aa5.42□□□□□ -1.54
VPS1YKR001C RFS1P38234 210 aaKnown RBP5.42□□□□□ -1.54
VPS1YKR001C SER3P40054 469 aa5.42□□□□□ -1.54
VPS1YKR001C ERG10P41338 398 aaKnown RBP5.42□□□□□ -1.54
VPS1YKR001C LSM8P47093 109 aaKnown RBP5.42□□□□□ -1.54
VPS1YKR001C PRP24P49960 444 aaKnown RBP5.42□□□□□ -1.54
VPS1YKR001C HFM1P51979 1187 aa5.42□□□□□ -1.54
VPS1YKR001C YGR042WP53227 271 aa5.42□□□□□ -1.54
VPS1YKR001C YMD8Q03697 442 aa5.42□□□□□ -1.54
VPS1YKR001C RUB1Q03919 77 aa5.42□□□□□ -1.54
VPS1YKR001C RCO1Q04779 684 aa5.42□□□□□ -1.54
VPS1YKR001C BCP1Q06338 283 aa5.42□□□□□ -1.54
VPS1YKR001C YLR001CQ07895 862 aa5.42□□□□□ -1.54
VPS1YKR001C GUP2Q08929 609 aa5.42□□□□□ -1.54
VPS1YKR001C OXR1Q08952 273 aa5.42□□□□□ -1.54
VPS1YKR001C NUR1Q12066 484 aa5.42□□□□□ -1.54
VPS1YKR001C NTO1Q12311 748 aa5.42□□□□□ -1.54
VPS1YKR001C MTR10Q99189 972 aa5.42□□□□□ -1.54
VPS1YKR001C YOR111WQ99210 232 aa5.42□□□□□ -1.54
VPS1YKR001C RPL25P04456 142 aaKnown RBP5.41□□□□□ -1.54
VPS1YKR001C CAN1P04817 590 aa5.41□□□□□ -1.54
VPS1YKR001C TUB1P09733 447 aaKnown RBP5.41□□□□□ -1.54
VPS1YKR001C KGD1P20967 1014 aaKnown RBP5.41□□□□□ -1.54
VPS1YKR001C RNR1P21524 888 aaKnown RBP5.41□□□□□ -1.54
VPS1YKR001C BAS1P22035 811 aa5.41□□□□□ -1.54
VPS1YKR001C NPR1P22211 790 aa5.41□□□□□ -1.54
VPS1YKR001C IMG1P25626 169 aa5.41□□□□□ -1.54
VPS1YKR001C GYP6P32806 458 aa5.41□□□□□ -1.54
VPS1YKR001C SUI1P32911 108 aaKnown RBP5.41□□□□□ -1.54
VPS1YKR001C SRP101P32916 621 aa5.41□□□□□ -1.54
VPS1YKR001C IMD2P38697 523 aaKnown RBP5.41□□□□□ -1.54
VPS1YKR001C EGD2P38879 174 aaKnown RBP5.41□□□□□ -1.54
VPS1YKR001C YDR089WP38966 869 aa5.41□□□□□ -1.54
VPS1YKR001C RGI2P40188 164 aa5.41□□□□□ -1.54
VPS1YKR001C YJL068CP40363 299 aa5.41□□□□□ -1.54
VPS1YKR001C YFL034WP43564 1073 aa5.41□□□□□ -1.54
VPS1YKR001C MSE1P48525 536 aa5.41□□□□□ -1.54
VPS1YKR001C ZPR1P53303 486 aaKnown RBP5.41□□□□□ -1.54
VPS1YKR001C YPL107WQ02873 248 aa5.41□□□□□ -1.54
VPS1YKR001C BNA7Q04066 261 aa5.41□□□□□ -1.54
VPS1YKR001C YLR177WQ06251 628 aa5.41□□□□□ -1.54
VPS1YKR001C DIA2Q08496 732 aaPredicted RBP5.41□□□□□ -1.54
VPS1YKR001C HXK2P04807 486 aaKnown RBP5.41□□□□□ -1.54
VPS1YKR001C KIN28P06242 306 aa5.41□□□□□ -1.54
VPS1YKR001C PCK1P10963 549 aa5.41□□□□□ -1.54
VPS1YKR001C UNG1P12887 359 aa5.41□□□□□ -1.54
VPS1YKR001C RPO26P20435 155 aa5.41□□□□□ -1.54
VPS1YKR001C RNR3P21672 869 aaKnown RBP5.41□□□□□ -1.54
VPS1YKR001C CMK2P22517 447 aa5.41□□□□□ -1.54
VPS1YKR001C RRP7P25368 297 aaPredicted RBP5.41□□□□□ -1.54
VPS1YKR001C SUA5P32579 426 aa5.41□□□□□ -1.54
VPS1YKR001C MTH1P35198 433 aa5.41□□□□□ -1.54
VPS1YKR001C EAP1P36041 632 aaKnown RBP5.41□□□□□ -1.54
VPS1YKR001C MUD2P36084 527 aaKnown RBP5.41□□□□□ -1.54
VPS1YKR001C TGL4P36165 910 aa5.41□□□□□ -1.54
VPS1YKR001C MRPL10P36520 322 aa5.41□□□□□ -1.54
VPS1YKR001C YBR071WP38243 211 aa5.41□□□□□ -1.54
VPS1YKR001C SAF1P38352 637 aa5.41□□□□□ -1.54
VPS1YKR001C SEN34P39707 275 aa5.41□□□□□ -1.54
VPS1YKR001C AST2P39945 430 aaKnown RBP5.41□□□□□ -1.54
VPS1YKR001C MOB1P40484 314 aa5.41□□□□□ -1.54
VPS1YKR001C YAP5P40574 245 aa5.41□□□□□ -1.54
VPS1YKR001C IRC6P43615 237 aa5.41□□□□□ -1.54
VPS1YKR001C CCC1P47818 322 aa5.41□□□□□ -1.54
VPS1YKR001C VAC7P53950 1165 aa5.41□□□□□ -1.54
VPS1YKR001C ORC3P54790 616 aa5.41□□□□□ -1.54
VPS1YKR001C NHP10Q03435 203 aa5.41□□□□□ -1.54
VPS1YKR001C ARX1Q03862 593 aaKnown RBP5.41□□□□□ -1.54
VPS1YKR001C SFH1Q06168 426 aa5.41□□□□□ -1.54
VPS1YKR001C CRD1Q07560 283 aa5.41□□□□□ -1.54
VPS1YKR001C SMC5Q08204 1093 aa5.41□□□□□ -1.54
VPS1YKR001C HUA2Q12134 243 aa5.41□□□□□ -1.54
VPS1YKR001C MSL5Q12186 476 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54not detected
VPS1YKR001C SEN1Q00416 2231 aaKnown RBP5.4□□□□□ -1.54
VPS1YKR001C GAL4P04386 881 aa5.4□□□□□ -1.54
VPS1YKR001C RPP1AP05318 106 aaPredicted RBP5.4□□□□□ -1.54
VPS1YKR001C MATALPHA1P0CY06 175 aa5.4□□□□□ -1.54
VPS1YKR001C HMLALPHA1P0CY07 175 aa5.4□□□□□ -1.54
VPS1YKR001C GLN4P13188 809 aaKnown RBP5.4□□□□□ -1.54
VPS1YKR001C CBF1P17106 351 aa5.4□□□□□ -1.54
VPS1YKR001C SIS1P25294 352 aaKnown RBP5.4□□□□□ -1.54
VPS1YKR001C BOS1P25385 244 aa5.4□□□□□ -1.54
VPS1YKR001C SIF2P38262 535 aa5.4□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms