RNA–Protein interactions for RNA: YGR280C

PXR1, Transcript of Essential protein involved in rRNA and snoRNA maturation, yeast

Gene PXR1, Length 816 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PXR1	YGR280C	YNR040W	P53736	256 aa		4.2	□□□□□ -1.74
PXR1	YGR280C	SNZ2	P53824	298 aa		4.2	□□□□□ -1.74
PXR1	YGR280C	ECM9	Q02202	377 aa		4.2	□□□□□ -1.74
PXR1	YGR280C	CCE1	Q03702	353 aa		4.2	□□□□□ -1.74
PXR1	YGR280C	ARP9	Q05123	467 aa		4.2	□□□□□ -1.74
PXR1	YGR280C	LDB18	Q07887	179 aa		4.2	□□□□□ -1.74
PXR1	YGR280C	BUD7	Q08754	746 aa		4.2	□□□□□ -1.74
PXR1	YGR280C	MDM32	Q12171	622 aa		4.2	□□□□□ -1.74
PXR1	YGR280C	YOL107W	Q12239	342 aa		4.2	□□□□□ -1.74
PXR1	YGR280C	FAS1	P07149	2051 aa	Known RBP	4.2	□□□□□ -1.74
PXR1	YGR280C	GAL7	P08431	366 aa		4.19	□□□□□ -1.74
PXR1	YGR280C	CMP2	P14747	604 aa		4.19	□□□□□ -1.74
PXR1	YGR280C	NUP1	P20676	1076 aa		4.19	□□□□□ -1.74
PXR1	YGR280C	VPS34	P22543	875 aa		4.19	□□□□□ -1.74
PXR1	YGR280C	YSR3	P23501	404 aa		4.19	□□□□□ -1.74
PXR1	YGR280C	BUB3	P26449	341 aa		4.19	□□□□□ -1.74
PXR1	YGR280C	MEI5	P32489	222 aa		4.19	□□□□□ -1.74
PXR1	YGR280C	UGP1	P32861	499 aa	Known RBP	4.19	□□□□□ -1.74
PXR1	YGR280C	UBC6	P33296	250 aa	Predicted RBP	4.19	□□□□□ -1.74
PXR1	YGR280C	DEF1	P35732	738 aa	Known RBP	4.19	□□□□□ -1.74
PXR1	YGR280C	RMA1	P36001	430 aa	Known RBP	4.19	□□□□□ -1.74
PXR1	YGR280C	MMS21	P38632	267 aa		4.19	□□□□□ -1.74
PXR1	YGR280C	IST3	P40565	148 aa	Predicted RBP	4.19	□□□□□ -1.74
PXR1	YGR280C	SKP1	P52286	194 aa		4.19	□□□□□ -1.74
PXR1	YGR280C	TIM10	P87108	93 aa		4.19	□□□□□ -1.74
PXR1	YGR280C	RRP15	Q06511	250 aa	Predicted RBP	4.19	□□□□□ -1.74
PXR1	YGR280C	CYK3	Q07533	885 aa		4.19	□□□□□ -1.74
PXR1	YGR280C	YRM1	Q12340	786 aa		4.19	□□□□□ -1.74
PXR1	YGR280C	OCA6	Q12454	224 aa		4.19	□□□□□ -1.74
PXR1	YGR280C	EFG1	Q3E705	233 aa	Known RBP	4.19	□□□□□ -1.74
PXR1	YGR280C	RPL19A	P0CX82	189 aa	Known RBP	4.18	□□□□□ -1.74
PXR1	YGR280C	RPL19B	P0CX83	189 aa	Predicted RBP	4.18	□□□□□ -1.74
PXR1	YGR280C	YPK1	P12688	680 aa	Known RBP	4.18	□□□□□ -1.74
PXR1	YGR280C	PDA1	P16387	420 aa	Known RBP	4.18	□□□□□ -1.74
PXR1	YGR280C	YJU2	P28320	278 aa	Predicted RBP	4.18	□□□□□ -1.74
PXR1	YGR280C	AEP1	P32493	518 aa		4.18	□□□□□ -1.74
PXR1	YGR280C	OM14	P38325	134 aa		4.18	□□□□□ -1.74
PXR1	YGR280C	APE4	P38821	490 aa		4.18	□□□□□ -1.74
PXR1	YGR280C	YHR219W	P38900	624 aa		4.18	□□□□□ -1.74
PXR1	YGR280C	TPA1	P40032	644 aa	Known RBP	4.18	□□□□□ -1.74
PXR1	YGR280C	YIL054W	P40524	105 aa		4.18	□□□□□ -1.74
PXR1	YGR280C	VMA13	P41807	478 aa	Known RBP	4.18	□□□□□ -1.74
PXR1	YGR280C	TES1	P41903	349 aa	Known RBP	4.18	□□□□□ -1.74
PXR1	YGR280C	MDJ2	P42834	146 aa		4.18	□□□□□ -1.74
PXR1	YGR280C	RGD2	P43556	714 aa		4.18	□□□□□ -1.74
PXR1	YGR280C	PHO86	P46956	311 aa		4.18	□□□□□ -1.74
PXR1	YGR280C	LCL3	P53153	274 aa		4.18	□□□□□ -1.74
PXR1	YGR280C	HST1	P53685	503 aa		4.18	□□□□□ -1.74
PXR1	YGR280C	CTK1	Q03957	528 aa	Known RBP	4.18	□□□□□ -1.74
PXR1	YGR280C	TY1A-DR2	Q03964	440 aa	Known RBP	4.18	□□□□□ -1.74
PXR1	YGR280C	YLR352W	Q06479	807 aa		4.18	□□□□□ -1.74
PXR1	YGR280C	YOR376W	Q08900	122 aa		4.18	□□□□□ -1.74
PXR1	YGR280C	HAL9	Q12180	1030 aa		4.18	□□□□□ -1.74
PXR1	YGR280C	HSH49	Q99181	213 aa	Predicted RBP	4.18	□□□□□ -1.74
PXR1	YGR280C	FRT1	Q99332	602 aa		4.18	□□□□□ -1.74
PXR1	YGR280C	BLM10	P43583	2143 aa		4.18	□□□□□ -1.74
PXR1	YGR280C	RPS3	P05750	240 aa	Known RBP	4.17	□□□□□ -1.74
PXR1	YGR280C	MAK32	P23060	363 aa		4.17	□□□□□ -1.74
PXR1	YGR280C	SGV1	P23293	657 aa	Known RBP	4.17	□□□□□ -1.74
PXR1	YGR280C	FAA1	P30624	700 aa	Known RBP	4.17	□□□□□ -1.74
PXR1	YGR280C	PMT2	P31382	759 aa		4.17	□□□□□ -1.74
PXR1	YGR280C	SAC6	P32599	642 aa	Known RBP	4.17	□□□□□ -1.74
PXR1	YGR280C	BIT2	P38346	545 aa		4.17	□□□□□ -1.74
PXR1	YGR280C	RIM11	P38615	370 aa		4.17	□□□□□ -1.74
PXR1	YGR280C	YDR089W	P38966	869 aa		4.17	□□□□□ -1.74
PXR1	YGR280C	VFA1	P40080	203 aa		4.17	□□□□□ -1.74
PXR1	YGR280C	BUD13	P46947	266 aa	Predicted RBP	4.17	□□□□□ -1.74
PXR1	YGR280C	COG1	P53079	417 aa		4.17	□□□□□ -1.74
PXR1	YGR280C	FHN1	P53279	174 aa		4.17	□□□□□ -1.74
PXR1	YGR280C	ENT5	Q03769	411 aa	Known RBP	4.17	□□□□□ -1.74
PXR1	YGR280C	MTQ2	Q03920	221 aa	Predicted RBP	4.17	□□□□□ -1.74
PXR1	YGR280C	NUT2	Q06213	157 aa		4.17	□□□□□ -1.74
PXR1	YGR280C	YOL075C	Q08234	1294 aa		4.17	□□□□□ -1.74
PXR1	YGR280C	CIR2	Q08822	631 aa		4.17	□□□□□ -1.74
PXR1	YGR280C	RNR2	P09938	399 aa	Known RBP	4.16	□□□□□ -1.74
PXR1	YGR280C	LAT1	P12695	482 aa	Known RBP	4.16	□□□□□ -1.74
PXR1	YGR280C	PRP2	P20095	876 aa	Predicted RBP	4.16	□□□□□ -1.74
PXR1	YGR280C	KNS1	P32350	737 aa	Predicted RBP	4.16	□□□□□ -1.74
PXR1	YGR280C	SRB5	P32585	307 aa		4.16	□□□□□ -1.74
PXR1	YGR280C	PRP18	P33411	251 aa	Predicted RBP	4.16	□□□□□ -1.74
PXR1	YGR280C	MTR2	P34232	184 aa	Known RBP	4.16	□□□□□ -1.74
PXR1	YGR280C	GND1	P38720	489 aa	Known RBP	4.16	□□□□□ -1.74
PXR1	YGR280C	AIM46	P38885	310 aa		4.16	□□□□□ -1.74
PXR1	YGR280C	MNL1	P38888	796 aa		4.16	□□□□□ -1.74
PXR1	YGR280C	ATM1	P40416	690 aa		4.16	□□□□□ -1.74
PXR1	YGR280C	BAP3	P41815	604 aa		4.16	□□□□□ -1.74
PXR1	YGR280C	NNF1	P47149	201 aa		4.16	□□□□□ -1.74
PXR1	YGR280C	SAP4	P53036	818 aa		4.16	□□□□□ -1.74
PXR1	YGR280C	PPT1	P53043	513 aa		4.16	□□□□□ -1.74
PXR1	YGR280C	ALF1	P53904	254 aa		4.16	□□□□□ -1.74
PXR1	YGR280C	RSC4	Q02206	625 aa		4.16	□□□□□ -1.74
PXR1	YGR280C	VAM6	Q07468	1049 aa		4.16	□□□□□ -1.74
PXR1	YGR280C	NCE102	Q12207	173 aa	RIP-Chip data	4.16	□□□□□ -1.74	not detected
PXR1	YGR280C	GPM3	Q12326	303 aa		4.16	□□□□□ -1.74
PXR1	YGR280C	Q0297	Q9ZZV8	51 aa		4.16	□□□□□ -1.74
PXR1	YGR280C	CCW14	O13547	238 aa		4.15	□□□□□ -1.75
PXR1	YGR280C	MEF1	P25039	761 aa		4.15	□□□□□ -1.75
PXR1	YGR280C	RPF2	P36160	344 aa	Known RBP	4.15	□□□□□ -1.75
PXR1	YGR280C	TAT1	P38085	619 aa		4.15	□□□□□ -1.75
PXR1	YGR280C	MAL33	P38157	468 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 50.8 ms