RNA–Protein interactions for RNA: YER011W

TIR1, Transcript of Cell wall mannoprotein, yeast

Gene TIR1, Length 765 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIR1	YER011W	NUP120	P35729	1037 aa		13.32	□□□□□ -0.28
TIR1	YER011W	DHH1	P39517	506 aa	Known RBP	13.32	□□□□□ -0.28
TIR1	YER011W	COA1	P40452	197 aa		13.32	□□□□□ -0.28
TIR1	YER011W	YRB1	P41920	201 aa	Known RBP	13.32	□□□□□ -0.28
TIR1	YER011W	EFM5	P53200	248 aa	Known RBP	13.32	□□□□□ -0.28
TIR1	YER011W	HST3	P53687	447 aa		13.32	□□□□□ -0.28
TIR1	YER011W	IBD2	P53892	351 aa		13.32	□□□□□ -0.28
TIR1	YER011W	SHE9	Q04172	456 aa		13.32	□□□□□ -0.28
TIR1	YER011W	CDC21	P06785	304 aa		13.31	□□□□□ -0.28
TIR1	YER011W	SEC15	P22224	910 aa		13.31	□□□□□ -0.28
TIR1	YER011W	PTH2	P34222	208 aa		13.31	□□□□□ -0.28
TIR1	YER011W	YKL100C	P34248	587 aa		13.31	□□□□□ -0.28
TIR1	YER011W	GIM4	P40005	111 aa	Known RBP	13.31	□□□□□ -0.28
TIR1	YER011W	YIL108W	P40483	696 aa	Known RBP	13.31	□□□□□ -0.28
TIR1	YER011W	SHY1	P53266	389 aa		13.31	□□□□□ -0.28
TIR1	YER011W	LSM3	P57743	89 aa	Known RBP	13.31	□□□□□ -0.28
TIR1	YER011W	HDA3	Q06623	655 aa		13.31	□□□□□ -0.28
TIR1	YER011W	RPN8	Q08723	338 aa	Known RBP	13.31	□□□□□ -0.28
TIR1	YER011W	PST1	Q12355	444 aa		13.31	□□□□□ -0.28
TIR1	YER011W	NOT5	Q12514	560 aa	Predicted RBP	13.31	□□□□□ -0.28
TIR1	YER011W	RSR1	P13856	272 aa		13.3	□□□□□ -0.28
TIR1	YER011W	MET8	P15807	274 aa		13.3	□□□□□ -0.28
TIR1	YER011W	RPC19	P28000	142 aa	Known RBP	13.3	□□□□□ -0.28
TIR1	YER011W	HSM3	P38348	480 aa		13.3	□□□□□ -0.28
TIR1	YER011W	NPT1	P39683	429 aa	Known RBP	13.3	□□□□□ -0.28
TIR1	YER011W	SPF1	P39986	1215 aa	Known RBP	13.3	□□□□□ -0.28
TIR1	YER011W	SWS2	P53937	143 aa		13.3	□□□□□ -0.28
TIR1	YER011W	TRM82	Q03774	444 aa		13.3	□□□□□ -0.28
TIR1	YER011W	BCH1	Q05029	724 aa		13.3	□□□□□ -0.28
TIR1	YER011W	RIF2	Q06208	395 aa		13.3	□□□□□ -0.28
TIR1	YER011W	YOL019W	Q08157	551 aa		13.3	□□□□□ -0.28
TIR1	YER011W	FMP27	Q06179	2628 aa		13.3	□□□□□ -0.28
TIR1	YER011W	ART10	P18634	518 aa	Known RBP	13.29	□□□□□ -0.28
TIR1	YER011W	MRE11	P32829	692 aa		13.29	□□□□□ -0.28
TIR1	YER011W	MAP2	P38174	421 aa	Known RBP	13.29	□□□□□ -0.28
TIR1	YER011W	UBP14	P38237	781 aa	Known RBP	13.29	□□□□□ -0.28
TIR1	YER011W	UBA4	P38820	440 aa		13.29	□□□□□ -0.28
TIR1	YER011W	SEC31	P38968	1273 aa	Known RBP	13.29	□□□□□ -0.28
TIR1	YER011W	PFA3	P42836	336 aa		13.29	□□□□□ -0.28
TIR1	YER011W	SLM2	P53955	656 aa		13.29	□□□□□ -0.28
TIR1	YER011W	ECM9	Q02202	377 aa		13.29	□□□□□ -0.28
TIR1	YER011W	AHA1	Q12449	350 aa	Known RBP	13.29	□□□□□ -0.28
TIR1	YER011W	SCL1	P21243	252 aa	Known RBP	13.28	□□□□□ -0.28
TIR1	YER011W	CLB1	P24868	471 aa		13.28	□□□□□ -0.28
TIR1	YER011W	MUM2	P38236	366 aa		13.28	□□□□□ -0.28
TIR1	YER011W	DED81	P38707	554 aa	Known RBP	13.28	□□□□□ -0.28
TIR1	YER011W	UTP9	P38882	575 aa	Known RBP	13.28	□□□□□ -0.28
TIR1	YER011W	YER034W	P40022	185 aa	Known RBP	13.28	□□□□□ -0.28
TIR1	YER011W	VMA13	P41807	478 aa	Known RBP	13.28	□□□□□ -0.28
TIR1	YER011W	MPS2	P53159	387 aa		13.28	□□□□□ -0.28
TIR1	YER011W	YML119W	Q03208	357 aa		13.28	□□□□□ -0.28
TIR1	YER011W	NHA1	Q99271	985 aa		13.28	□□□□□ -0.28
TIR1	YER011W	CAN1	P04817	590 aa		13.27	□□□□□ -0.29
TIR1	YER011W	GUK1	P15454	187 aa	Known RBP	13.27	□□□□□ -0.29
TIR1	YER011W	YCK2	P23292	546 aa	Known RBP	13.27	□□□□□ -0.29
TIR1	YER011W	DEF1	P35732	738 aa	Known RBP	13.27	□□□□□ -0.29
TIR1	YER011W	EAP1	P36041	632 aa	Known RBP	13.27	□□□□□ -0.29
TIR1	YER011W	MRS2	Q01926	470 aa		13.27	□□□□□ -0.29
TIR1	YER011W	YPT6	Q99260	215 aa		13.27	□□□□□ -0.29
TIR1	YER011W	CLN2	P20438	545 aa		13.26	□□□□□ -0.29
TIR1	YER011W	SOL2	P37262	315 aa		13.26	□□□□□ -0.29
TIR1	YER011W	GIC1	P38785	314 aa		13.26	□□□□□ -0.29
TIR1	YER011W	YHR127W	P38833	243 aa	Known RBP	13.26	□□□□□ -0.29
TIR1	YER011W	SHU2	P38957	223 aa		13.26	□□□□□ -0.29
TIR1	YER011W	EMP65	P40085	556 aa		13.26	□□□□□ -0.29
TIR1	YER011W	STB2	P46679	850 aa		13.26	□□□□□ -0.29
TIR1	YER011W	TY4A-J	P47023	414 aa		13.26	□□□□□ -0.29
TIR1	YER011W	MRM2	P53123	320 aa		13.26	□□□□□ -0.29
TIR1	YER011W	YGR015C	P53208	328 aa		13.26	□□□□□ -0.29
TIR1	YER011W	YDL129W	Q07555	291 aa		13.26	□□□□□ -0.29
TIR1	YER011W	NOB1	Q08444	459 aa	Known RBP	13.26	□□□□□ -0.29
TIR1	YER011W	RED1	P14291	827 aa		13.25	□□□□□ -0.29
TIR1	YER011W	BAS1	P22035	811 aa		13.25	□□□□□ -0.29
TIR1	YER011W	ERG6	P25087	383 aa	Known RBP	13.25	□□□□□ -0.29
TIR1	YER011W	CRM1	P30822	1084 aa	Known RBP	13.25	□□□□□ -0.29
TIR1	YER011W	SDH3	P33421	198 aa		13.25	□□□□□ -0.29
TIR1	YER011W	CTP1	P38152	299 aa		13.25	□□□□□ -0.29
TIR1	YER011W	RIM11	P38615	370 aa		13.25	□□□□□ -0.29
TIR1	YER011W	BZZ1	P38822	633 aa		13.25	□□□□□ -0.29
TIR1	YER011W	NUP85	P46673	744 aa		13.25	□□□□□ -0.29
TIR1	YER011W	GTR2	P53290	341 aa		13.25	□□□□□ -0.29
TIR1	YER011W	AAT1	Q01802	451 aa		13.25	□□□□□ -0.29
TIR1	YER011W	YML131W	Q03102	365 aa		13.25	□□□□□ -0.29
TIR1	YER011W	GAS3	Q03655	524 aa		13.25	□□□□□ -0.29
TIR1	YER011W	YDR444W	Q04093	687 aa		13.25	□□□□□ -0.29
TIR1	YER011W	YDR056C	Q12025	205 aa		13.25	□□□□□ -0.29
TIR1	YER011W	SPT3	P06844	337 aa		13.24	□□□□□ -0.29
TIR1	YER011W	PRP16	P15938	1071 aa	Predicted RBP	13.24	□□□□□ -0.29
TIR1	YER011W	PPH21	P23594	369 aa		13.24	□□□□□ -0.29
TIR1	YER011W	NIP1	P32497	812 aa	Known RBP	13.24	□□□□□ -0.29
TIR1	YER011W	MRPL37	P36532	105 aa		13.24	□□□□□ -0.29
TIR1	YER011W	UBP6	P43593	499 aa	Known RBP	13.24	□□□□□ -0.29
TIR1	YER011W	YJR149W	P47177	404 aa		13.24	□□□□□ -0.29
TIR1	YER011W	YJR154W	P47181	346 aa		13.24	□□□□□ -0.29
TIR1	YER011W	ROT1	Q03691	256 aa		13.24	□□□□□ -0.29
TIR1	YER011W	THI73	Q07904	523 aa		13.24	□□□□□ -0.29
TIR1	YER011W	HSH49	Q99181	213 aa	Predicted RBP	13.24	□□□□□ -0.29
TIR1	YER011W	STE3	P06783	470 aa		13.23	□□□□□ -0.29
TIR1	YER011W	NPP1	P25353	742 aa		13.23	□□□□□ -0.29
TIR1	YER011W	GDT1	P38301	280 aa	Predicted RBP	13.23	□□□□□ -0.29

Retrieved 100 of 5,963 RNA–protein pairs in 72.5 ms