RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C YOL159CQ08300 171 aa3.33□□□□□ -1.88
VAB2YEL005C TAH18Q12181 623 aa3.33□□□□□ -1.88
VAB2YEL005C SGS1P35187 1447 aa3.33□□□□□ -1.88
VAB2YEL005C KAR3P17119 729 aa3.32□□□□□ -1.88
VAB2YEL005C PGS1P25578 521 aa3.32□□□□□ -1.88
VAB2YEL005C MCM4P30665 933 aaKnown RBP3.32□□□□□ -1.88
VAB2YEL005C SSE2P32590 693 aaKnown RBP3.32□□□□□ -1.88
VAB2YEL005C PDR3P33200 976 aa3.32□□□□□ -1.88
VAB2YEL005C YBR144CP34215 104 aa3.32□□□□□ -1.88
VAB2YEL005C YBL055CP34220 418 aaPredicted RBP3.32□□□□□ -1.88
VAB2YEL005C YPK3P38070 525 aa3.32□□□□□ -1.88
VAB2YEL005C GND1P38720 489 aaKnown RBP3.32□□□□□ -1.88
VAB2YEL005C NDE1P40215 560 aa3.32□□□□□ -1.88
VAB2YEL005C YIL060WP40519 144 aa3.32□□□□□ -1.88
VAB2YEL005C DOT5P40553 215 aa3.32□□□□□ -1.88
VAB2YEL005C MAF1P41910 395 aa3.32□□□□□ -1.88
VAB2YEL005C IPI3P53877 555 aa3.32□□□□□ -1.88
VAB2YEL005C RSM23Q01163 450 aa3.32□□□□□ -1.88
VAB2YEL005C MDM1Q01846 1127 aa3.32□□□□□ -1.88
VAB2YEL005C YLR281CQ05863 155 aa3.32□□□□□ -1.88
VAB2YEL005C SNA4Q07549 140 aa3.32□□□□□ -1.88
VAB2YEL005C YEH1Q07804 573 aa3.32□□□□□ -1.88
VAB2YEL005C YJR112W-AQ3E743 109 aa3.32□□□□□ -1.88
VAB2YEL005C YPT6Q99260 215 aa3.32□□□□□ -1.88
VAB2YEL005C PUT2P07275 575 aa3.31□□□□□ -1.88
VAB2YEL005C SNF3P10870 884 aa3.31□□□□□ -1.88
VAB2YEL005C OLE1P21147 510 aaKnown RBP3.31□□□□□ -1.88
VAB2YEL005C YCP4P25349 247 aaKnown RBP3.31□□□□□ -1.88
VAB2YEL005C PUP3P25451 205 aaKnown RBP3.31□□□□□ -1.88
VAB2YEL005C ATO2P32907 282 aa3.31□□□□□ -1.88
VAB2YEL005C YNK1P36010 153 aaKnown RBP3.31□□□□□ -1.88
VAB2YEL005C RPL32P38061 130 aaKnown RBP3.31□□□□□ -1.88
VAB2YEL005C YBR225WP38321 900 aa3.31□□□□□ -1.88
VAB2YEL005C CIN4P39110 191 aa3.31□□□□□ -1.88
VAB2YEL005C PCL6P40038 420 aa3.31□□□□□ -1.88
VAB2YEL005C SAD1P43589 448 aa3.31□□□□□ -1.88
VAB2YEL005C GIS2P53849 153 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
VAB2YEL005C VPS75P53853 264 aa3.31□□□□□ -1.88
VAB2YEL005C MFB1Q04922 465 aa3.31□□□□□ -1.88
VAB2YEL005C VPS38Q05919 439 aa3.31□□□□□ -1.88
VAB2YEL005C SSK1Q07084 712 aa3.31□□□□□ -1.88
VAB2YEL005C GEP3Q08622 556 aa3.31□□□□□ -1.88
VAB2YEL005C BUD7Q08754 746 aa3.31□□□□□ -1.88
VAB2YEL005C SPE4Q12455 300 aa3.31□□□□□ -1.88
VAB2YEL005C RTP1Q12751 981 aa3.31□□□□□ -1.88
VAB2YEL005C FOB1O13329 566 aa3.3□□□□□ -1.88
VAB2YEL005C DFR1P07807 211 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
VAB2YEL005C NOP1P15646 327 aaKnown RBP3.3□□□□□ -1.88
VAB2YEL005C MET8P15807 274 aa3.3□□□□□ -1.88
VAB2YEL005C PDA1P16387 420 aaKnown RBP3.3□□□□□ -1.88
VAB2YEL005C PAP1P29468 568 aaKnown RBP3.3□□□□□ -1.88
VAB2YEL005C SNC1P31109 117 aa3.3□□□□□ -1.88
VAB2YEL005C YME1P32795 747 aa3.3□□□□□ -1.88
VAB2YEL005C YKL023WP36103 277 aaKnown RBP3.3□□□□□ -1.88
VAB2YEL005C MIC60P36112 540 aa3.3□□□□□ -1.88
VAB2YEL005C RKM3P38222 552 aa3.3□□□□□ -1.88
VAB2YEL005C UTP9P38882 575 aaKnown RBP3.3□□□□□ -1.88
VAB2YEL005C RGI2P40188 164 aa3.3□□□□□ -1.88
VAB2YEL005C YGR126WP53274 230 aa3.3□□□□□ -1.88
VAB2YEL005C SMM1P53720 384 aaKnown RBP3.3□□□□□ -1.88
VAB2YEL005C TIM10P87108 93 aa3.3□□□□□ -1.88
VAB2YEL005C BET4Q00618 327 aa3.3□□□□□ -1.88
VAB2YEL005C EKI1Q03764 534 aa3.3□□□□□ -1.88
VAB2YEL005C IMH1Q06704 911 aaKnown RBP3.3□□□□□ -1.88
VAB2YEL005C MLH2Q07980 695 aa3.3□□□□□ -1.88
VAB2YEL005C SDH5Q08230 162 aa3.3□□□□□ -1.88
VAB2YEL005C AVL9Q12500 764 aa3.3□□□□□ -1.88
VAB2YEL005C KGD1P20967 1014 aaKnown RBP3.29□□□□□ -1.88
VAB2YEL005C BUD5P25300 642 aaPredicted RBP3.29□□□□□ -1.88
VAB2YEL005C GID7P25569 745 aa3.29□□□□□ -1.88
VAB2YEL005C NUP133P36161 1157 aa3.29□□□□□ -1.88
VAB2YEL005C SRO77P38163 1010 aa3.29□□□□□ -1.88
VAB2YEL005C ERG7P38604 731 aa3.29□□□□□ -1.88
VAB2YEL005C UBA4P38820 440 aa3.29□□□□□ -1.88
VAB2YEL005C NOC2P39744 710 aaKnown RBP3.29□□□□□ -1.88
VAB2YEL005C YIL169CP40442 995 aa3.29□□□□□ -1.88
VAB2YEL005C HXT9P40885 567 aa3.29□□□□□ -1.88
VAB2YEL005C SNG1P46950 547 aa3.29□□□□□ -1.88
VAB2YEL005C SOL4P53315 255 aa3.29□□□□□ -1.88
VAB2YEL005C MRPL19P53875 158 aa3.29□□□□□ -1.88
VAB2YEL005C ESBP6P53918 673 aa3.29□□□□□ -1.88
VAB2YEL005C RSF1Q05043 376 aa3.29□□□□□ -1.88
VAB2YEL005C YMR034CQ05131 434 aaPredicted RBP3.29□□□□□ -1.88
VAB2YEL005C YLR352WQ06479 807 aa3.29□□□□□ -1.88
VAB2YEL005C YDL057WQ07379 328 aa3.29□□□□□ -1.88
VAB2YEL005C YML133CQ03099 1374 aa3.28□□□□□ -1.88
VAB2YEL005C YLL067CQ07888 1374 aa3.28□□□□□ -1.88
VAB2YEL005C YLL066CQ99208 1374 aa3.28□□□□□ -1.88
VAB2YEL005C GAL80P04387 435 aa3.28□□□□□ -1.88
VAB2YEL005C ART10P18634 518 aaKnown RBP3.28□□□□□ -1.88
VAB2YEL005C RAD24P32641 659 aa3.28□□□□□ -1.88
VAB2YEL005C TRS65P32893 560 aa3.28□□□□□ -1.88
VAB2YEL005C PHD1P36093 366 aa3.28□□□□□ -1.88
VAB2YEL005C LAG1P38703 411 aa3.28□□□□□ -1.88
VAB2YEL005C RTS2P40962 232 aa3.28□□□□□ -1.88
VAB2YEL005C RPS10BP46784 105 aaKnown RBP3.28□□□□□ -1.88
VAB2YEL005C SRB7P47822 140 aa3.28□□□□□ -1.88
VAB2YEL005C IMD4P50094 524 aaKnown RBP3.28□□□□□ -1.88
VAB2YEL005C ARE2P53629 642 aaKnown RBP3.28□□□□□ -1.88
VAB2YEL005C SHR3Q02774 210 aa3.28□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms