RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W SGF73P53165 657 aa2.87□□□□□ -1.95
SSF2YDR312W MEP3P53390 489 aa2.87□□□□□ -1.95
SSF2YDR312W IST1P53843 298 aaPredicted RBP2.87□□□□□ -1.95
SSF2YDR312W ESBP6P53918 673 aa2.87□□□□□ -1.95
SSF2YDR312W BET4Q00618 327 aa2.87□□□□□ -1.95
SSF2YDR312W ARP9Q05123 467 aa2.87□□□□□ -1.95
SSF2YDR312W YLR281CQ05863 155 aa2.87□□□□□ -1.95
SSF2YDR312W VIP1Q06685 1146 aaKnown RBP2.87□□□□□ -1.95
SSF2YDR312W HXK2P04807 486 aaKnown RBP2.86□□□□□ -1.95
SSF2YDR312W FUM1P08417 488 aaKnown RBP2.86□□□□□ -1.95
SSF2YDR312W SSH4P32343 579 aa2.86□□□□□ -1.95
SSF2YDR312W RKM3P38222 552 aa2.86□□□□□ -1.95
SSF2YDR312W RFC1P38630 861 aaKnown RBP2.86□□□□□ -1.95
SSF2YDR312W PKP1P40530 394 aa2.86□□□□□ -1.95
SSF2YDR312W SAD1P43589 448 aa2.86□□□□□ -1.95
SSF2YDR312W DPB11P47027 764 aaPredicted RBP2.86□□□□□ -1.95
SSF2YDR312W ARP10Q04549 284 aa2.86□□□□□ -1.95
SSF2YDR312W ECI1Q05871 280 aa2.86□□□□□ -1.95
SSF2YDR312W UTP21Q06078 939 aaPredicted RBP2.86□□□□□ -1.95
SSF2YDR312W SKG3Q06315 1026 aa2.86□□□□□ -1.95
SSF2YDR312W MCP2Q06567 569 aa2.86□□□□□ -1.95
SSF2YDR312W ENT4Q07872 247 aa2.86□□□□□ -1.95
SSF2YDR312W NBP2Q12163 236 aa2.86□□□□□ -1.95
SSF2YDR312W MCM10P32354 571 aa2.85□□□□□ -1.95
SSF2YDR312W ARP1P38696 384 aa2.85□□□□□ -1.95
SSF2YDR312W YND1P40009 630 aa2.85□□□□□ -1.95
SSF2YDR312W BUR6P40096 142 aa2.85□□□□□ -1.95
SSF2YDR312W YIL060WP40519 144 aa2.85□□□□□ -1.95
SSF2YDR312W AAD10P47182 288 aa2.85□□□□□ -1.95
SSF2YDR312W YGL260WP53056 76 aa2.85□□□□□ -1.95
SSF2YDR312W NNF2P53253 936 aa2.85□□□□□ -1.95
SSF2YDR312W INA17Q02888 182 aa2.85□□□□□ -1.95
SSF2YDR312W RIX7Q07844 837 aaKnown RBP2.85□□□□□ -1.95
SSF2YDR312W INP53Q12271 1107 aa2.85□□□□□ -1.95
SSF2YDR312W EDE1P34216 1381 aa2.85□□□□□ -1.95
SSF2YDR312W SRB8P25648 1427 aa2.85□□□□□ -1.95
SSF2YDR312W KRS1P15180 591 aaKnown RBP2.84□□□□□ -1.96
SSF2YDR312W SNU114P36048 1008 aaKnown RBP2.84□□□□□ -1.96
SSF2YDR312W RPS7BP48164 190 aaKnown RBP2.84□□□□□ -1.96
SSF2YDR312W STR3P53101 465 aaKnown RBP2.84□□□□□ -1.96
SSF2YDR312W BSC5P53755 489 aa2.84□□□□□ -1.96
SSF2YDR312W YNL234WP53857 426 aa2.84□□□□□ -1.96
SSF2YDR312W YMR178WQ03219 274 aaKnown RBP2.84□□□□□ -1.96
SSF2YDR312W RAD30Q04049 632 aa2.84□□□□□ -1.96
SSF2YDR312W YMR018WQ04364 514 aa2.84□□□□□ -1.96
SSF2YDR312W YMR317WQ04893 1140 aa2.84□□□□□ -1.96
SSF2YDR312W FMP42Q04991 504 aa2.84□□□□□ -1.96
SSF2YDR312W ADE13Q05911 482 aaKnown RBP2.84□□□□□ -1.96
SSF2YDR312W YTH1Q06102 208 aaPredicted RBP2.84□□□□□ -1.96
SSF2YDR312W TY3B-IQ7LHG5 1498 aaKnown RBP2.83□□□□□ -1.96
SSF2YDR312W PHO2P07269 559 aa2.83□□□□□ -1.96
SSF2YDR312W LCB1P25045 558 aaKnown RBP2.83□□□□□ -1.96
SSF2YDR312W PGS1P25578 521 aa2.83□□□□□ -1.96
SSF2YDR312W PPZ1P26570 692 aa2.83□□□□□ -1.96
SSF2YDR312W PDR3P33200 976 aa2.83□□□□□ -1.96
SSF2YDR312W MIA40P36046 403 aa2.83□□□□□ -1.96
SSF2YDR312W MUD2P36084 527 aaKnown RBP2.83□□□□□ -1.96
SSF2YDR312W STV1P37296 890 aa2.83□□□□□ -1.96
SSF2YDR312W DIA4P38705 446 aaPredicted RBP2.83□□□□□ -1.96
SSF2YDR312W ANS1P38832 159 aa2.83□□□□□ -1.96
SSF2YDR312W UIP3P39547 235 aa2.83□□□□□ -1.96
SSF2YDR312W VID27P40157 782 aa2.83□□□□□ -1.96
SSF2YDR312W LYS14P40971 790 aa2.83□□□□□ -1.96
SSF2YDR312W ARC1P46672 376 aaKnown RBP2.83□□□□□ -1.96
SSF2YDR312W SMC3P47037 1230 aa2.83□□□□□ -1.96
SSF2YDR312W HOS2P53096 452 aaPredicted RBP2.83□□□□□ -1.96
SSF2YDR312W SUB1P54000 292 aaKnown RBP2.83□□□□□ -1.96
SSF2YDR312W YSA1Q01976 231 aa2.83□□□□□ -1.96
SSF2YDR312W SVL3Q03088 825 aaKnown RBP2.83□□□□□ -1.96
SSF2YDR312W EKI1Q03764 534 aa2.83□□□□□ -1.96
SSF2YDR312W YMR254CQ04838 102 aa2.83□□□□□ -1.96
SSF2YDR312W OPY2Q06810 360 aa2.83□□□□□ -1.96
SSF2YDR312W YDL218WQ07629 317 aa2.83□□□□□ -1.96
SSF2YDR312W APL5Q08951 932 aaKnown RBP2.83□□□□□ -1.96
SSF2YDR312W PSK1P31374 1356 aa2.82□□□□□ -1.96
SSF2YDR312W RAD9P14737 1309 aa2.82□□□□□ -1.96
SSF2YDR312W CDC24P11433 854 aaPredicted RBP2.82□□□□□ -1.96
SSF2YDR312W RPB8P20436 146 aa2.82□□□□□ -1.96
SSF2YDR312W PWP1P21304 576 aaKnown RBP2.82□□□□□ -1.96
SSF2YDR312W MGR1P25573 417 aa2.82□□□□□ -1.96
SSF2YDR312W PDB1P32473 366 aaKnown RBP2.82□□□□□ -1.96
SSF2YDR312W YKL050CP35736 922 aa2.82□□□□□ -1.96
SSF2YDR312W YPK3P38070 525 aa2.82□□□□□ -1.96
SSF2YDR312W EFM2P38347 419 aa2.82□□□□□ -1.96
SSF2YDR312W YNG2P38806 282 aaKnown RBP2.82□□□□□ -1.96
SSF2YDR312W NAB3P38996 802 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
SSF2YDR312W YEL068CP39977 110 aa2.82□□□□□ -1.96
SSF2YDR312W PKP2P53170 491 aa2.82□□□□□ -1.96
SSF2YDR312W GIS2P53849 153 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96 RIP-Chip
SSF2YDR312W YNL181WP53878 407 aa2.82□□□□□ -1.96
SSF2YDR312W ZDS2P54786 942 aa2.82□□□□□ -1.96
SSF2YDR312W SMA1Q02651 245 aa2.82□□□□□ -1.96
SSF2YDR312W CTL1Q03220 320 aaKnown RBP2.82□□□□□ -1.96
SSF2YDR312W ATG26Q06321 1198 aa2.82□□□□□ -1.96
SSF2YDR312W PSR1Q07800 427 aa2.82□□□□□ -1.96
SSF2YDR312W APL4Q12028 832 aa2.82□□□□□ -1.96
SSF2YDR312W SKM1Q12469 655 aa2.82□□□□□ -1.96
SSF2YDR312W RSF2P46974 1380 aa2.81□□□□□ -1.96
SSF2YDR312W CDC16P09798 840 aa2.81□□□□□ -1.96
SSF2YDR312W RPL19AP0CX82 189 aaKnown RBP2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 80.1 ms