RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	SPH1	Q06160	661 aa		5.73	□□□□□ -1.49
SNF11	YDR073W	FRE3	Q08905	711 aa		5.73	□□□□□ -1.49
SNF11	YDR073W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	5.73	□□□□□ -1.49	not detected
SNF11	YDR073W	LEU9	Q12166	604 aa	Known RBP	5.73	□□□□□ -1.49
SNF11	YDR073W	LCB4	Q12246	624 aa		5.73	□□□□□ -1.49
SNF11	YDR073W	PCT1	P13259	424 aa		5.72	□□□□□ -1.49
SNF11	YDR073W	KGD1	P20967	1014 aa	Known RBP	5.72	□□□□□ -1.49
SNF11	YDR073W	PUP3	P25451	205 aa	Known RBP	5.72	□□□□□ -1.49
SNF11	YDR073W	SNU114	P36048	1008 aa	Known RBP	5.72	□□□□□ -1.49
SNF11	YDR073W	THI2	P38141	450 aa		5.72	□□□□□ -1.49
SNF11	YDR073W	ICS2	P38284	255 aa		5.72	□□□□□ -1.49
SNF11	YDR073W	VBA2	P38358	474 aa	Known RBP	5.72	□□□□□ -1.49
SNF11	YDR073W	PHM8	P40025	321 aa		5.72	□□□□□ -1.49
SNF11	YDR073W	FET5	P43561	622 aa		5.72	□□□□□ -1.49
SNF11	YDR073W	YGR149W	P48236	432 aa		5.72	□□□□□ -1.49
SNF11	YDR073W	YGL138C	P53122	345 aa		5.72	□□□□□ -1.49
SNF11	YDR073W	RIM8	P53179	542 aa		5.72	□□□□□ -1.49
SNF11	YDR073W	PLM2	Q04383	521 aa		5.72	□□□□□ -1.49
SNF11	YDR073W	PSY3	Q12318	242 aa		5.72	□□□□□ -1.49
SNF11	YDR073W	YDL007C-A	Q2V2Q0	85 aa		5.72	□□□□□ -1.49
SNF11	YDR073W	RNR3	P21672	869 aa	Known RBP	5.71	□□□□□ -1.5
SNF11	YDR073W	MRPL9	P31334	269 aa		5.71	□□□□□ -1.5
SNF11	YDR073W	ADH5	P38113	351 aa	Known RBP	5.71	□□□□□ -1.5
SNF11	YDR073W	ELO1	P39540	310 aa		5.71	□□□□□ -1.5
SNF11	YDR073W	SAP1	P39955	897 aa	Known RBP	5.71	□□□□□ -1.5
SNF11	YDR073W	ARG2	P40360	574 aa		5.71	□□□□□ -1.5
SNF11	YDR073W	RPN11	P43588	306 aa	Known RBP	5.71	□□□□□ -1.5
SNF11	YDR073W	URB2	P47108	1174 aa		5.71	□□□□□ -1.5
SNF11	YDR073W	CAF130	P53280	1122 aa	Predicted RBP	5.71	□□□□□ -1.5
SNF11	YDR073W	YNR068C	P53754	272 aa		5.71	□□□□□ -1.5
SNF11	YDR073W	RHO5	P53879	331 aa	Known RBP	5.71	□□□□□ -1.5
SNF11	YDR073W	YDR179W-A	Q03983	463 aa		5.71	□□□□□ -1.5
SNF11	YDR073W	PPM1	Q04081	328 aa		5.71	□□□□□ -1.5
SNF11	YDR073W	DBP9	Q06218	594 aa	Known RBP	5.71	□□□□□ -1.5
SNF11	YDR073W	RLP24	Q07915	199 aa	Known RBP	5.71	□□□□□ -1.5
SNF11	YDR073W	MLH2	Q07980	695 aa		5.71	□□□□□ -1.5
SNF11	YDR073W	YLR278C	Q05854	1341 aa		5.71	□□□□□ -1.5
SNF11	YDR073W	ALG7	P07286	448 aa		5.7	□□□□□ -1.5
SNF11	YDR073W	ILV2	P07342	687 aa	Known RBP	5.7	□□□□□ -1.5
SNF11	YDR073W	LPD1	P09624	499 aa	Known RBP	5.7	□□□□□ -1.5
SNF11	YDR073W	WHI2	P12611	486 aa		5.7	□□□□□ -1.5
SNF11	YDR073W	IDH2	P28241	369 aa	Known RBP	5.7	□□□□□ -1.5
SNF11	YDR073W	TOD6	P34219	525 aa		5.7	□□□□□ -1.5
SNF11	YDR073W	TSA1	P34760	196 aa	Known RBP	5.7	□□□□□ -1.5
SNF11	YDR073W	GMH1	P36125	273 aa		5.7	□□□□□ -1.5
SNF11	YDR073W	YSW1	P38280	609 aa		5.7	□□□□□ -1.5
SNF11	YDR073W	MSR1	P38714	643 aa		5.7	□□□□□ -1.5
SNF11	YDR073W	RTT105	P40063	208 aa		5.7	□□□□□ -1.5
SNF11	YDR073W	NAS2	P40555	220 aa		5.7	□□□□□ -1.5
SNF11	YDR073W	YFR020W	P43600	232 aa		5.7	□□□□□ -1.5
SNF11	YDR073W	SMC3	P47037	1230 aa		5.7	□□□□□ -1.5
SNF11	YDR073W	APT1	P49435	187 aa	Known RBP	5.7	□□□□□ -1.5
SNF11	YDR073W	ALT2	P52892	507 aa		5.7	□□□□□ -1.5
SNF11	YDR073W	MLC1	P53141	149 aa		5.7	□□□□□ -1.5
SNF11	YDR073W	COQ6	P53318	479 aa		5.7	□□□□□ -1.5
SNF11	YDR073W	SKO1	Q02100	647 aa		5.7	□□□□□ -1.5
SNF11	YDR073W	YMR111C	Q04461	462 aa	Predicted RBP	5.7	□□□□□ -1.5
SNF11	YDR073W	UAF30	Q08747	228 aa		5.7	□□□□□ -1.5
SNF11	YDR073W	ATG9	Q12142	997 aa		5.7	□□□□□ -1.5
SNF11	YDR073W	URA4	P20051	364 aa		5.69	□□□□□ -1.5
SNF11	YDR073W	SNT1	P25357	1226 aa		5.69	□□□□□ -1.5
SNF11	YDR073W	BOS1	P25385	244 aa		5.69	□□□□□ -1.5
SNF11	YDR073W	YBL055C	P34220	418 aa	Predicted RBP	5.69	□□□□□ -1.5
SNF11	YDR073W	ADE17	P38009	592 aa	Known RBP	5.69	□□□□□ -1.5
SNF11	YDR073W	CBR1	P38626	284 aa	Known RBP	5.69	□□□□□ -1.5
SNF11	YDR073W	STU2	P46675	888 aa		5.69	□□□□□ -1.5
SNF11	YDR073W	NET1	P47035	1189 aa		5.69	□□□□□ -1.5
SNF11	YDR073W	FMS1	P50264	508 aa		5.69	□□□□□ -1.5
SNF11	YDR073W	MGR3	Q04472	501 aa		5.69	□□□□□ -1.5
SNF11	YDR073W	TEN1	Q07921	160 aa		5.69	□□□□□ -1.5
SNF11	YDR073W	PML1	Q07930	204 aa	Predicted RBP	5.69	□□□□□ -1.5
SNF11	YDR073W	SIL1	Q08199	421 aa		5.69	□□□□□ -1.5
SNF11	YDR073W	AIM39	Q08223	395 aa		5.69	□□□□□ -1.5
SNF11	YDR073W	AEP3	Q12089	606 aa		5.69	□□□□□ -1.5
SNF11	YDR073W	HER1	Q12276	1246 aa		5.69	□□□□□ -1.5
SNF11	YDR073W	MDY2	Q12285	212 aa		5.69	□□□□□ -1.5
SNF11	YDR073W	YDR061W	Q12298	539 aa		5.69	□□□□□ -1.5
SNF11	YDR073W	ZPS1	Q12512	249 aa		5.69	□□□□□ -1.5
SNF11	YDR073W	PPR1	P07272	904 aa	Predicted RBP	5.68	□□□□□ -1.5
SNF11	YDR073W	PRP6	P19735	899 aa	Predicted RBP	5.68	□□□□□ -1.5
SNF11	YDR073W	OSW5	P40219	148 aa		5.68	□□□□□ -1.5
SNF11	YDR073W	YIL089W	P40500	205 aa		5.68	□□□□□ -1.5
SNF11	YDR073W	PDR16	P53860	351 aa	Known RBP	5.68	□□□□□ -1.5
SNF11	YDR073W	ACL4	Q03771	387 aa		5.68	□□□□□ -1.5
SNF11	YDR073W	RTC5	Q12108	567 aa	Known RBP	5.68	□□□□□ -1.5
SNF11	YDR073W	MDM20	Q12387	796 aa	Known RBP	5.68	□□□□□ -1.5
SNF11	YDR073W	AHA1	Q12449	350 aa	Known RBP	5.68	□□□□□ -1.5
SNF11	YDR073W	TFB5	Q3E7C1	72 aa	Predicted RBP	5.68	□□□□□ -1.5
SNF11	YDR073W	Q0010	Q9ZZX9	128 aa		5.68	□□□□□ -1.5
SNF11	YDR073W	YLR358C	O13565	187 aa		5.67	□□□□□ -1.5
SNF11	YDR073W	PET111	P08468	800 aa		5.67	□□□□□ -1.5
SNF11	YDR073W	GAS1	P22146	559 aa	Known RBP	5.67	□□□□□ -1.5
SNF11	YDR073W	SSE1	P32589	693 aa	Known RBP	5.67	□□□□□ -1.5
SNF11	YDR073W	RRP1	P35178	278 aa	Predicted RBP	5.67	□□□□□ -1.5
SNF11	YDR073W	NUP133	P36161	1157 aa		5.67	□□□□□ -1.5
SNF11	YDR073W	PIM1	P36775	1133 aa		5.67	□□□□□ -1.5
SNF11	YDR073W	PPS1	P38148	807 aa		5.67	□□□□□ -1.5
SNF11	YDR073W	NDC80	P40460	691 aa		5.67	□□□□□ -1.5
SNF11	YDR073W	YJL107C	P42947	387 aa		5.67	□□□□□ -1.5
SNF11	YDR073W	YJL132W	P47014	750 aa		5.67	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 54.2 ms