RNA–Protein interactions for RNA: YDR034C-D

YDR034C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR034C-D, Length 5,313 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR034C-D	YDR034C-D	GTF1	P53260	183 aa	Predicted RBP	2.98	□□□□□ -1.93
YDR034C-D	YDR034C-D	SMA2	Q04658	369 aa		2.98	□□□□□ -1.93
YDR034C-D	YDR034C-D	MDM30	Q05930	598 aa		2.98	□□□□□ -1.93
YDR034C-D	YDR034C-D	MCP2	Q06567	569 aa		2.98	□□□□□ -1.93
YDR034C-D	YDR034C-D	BAG7	Q12128	409 aa		2.98	□□□□□ -1.93
YDR034C-D	YDR034C-D	YLR122C	Q12312	125 aa		2.98	□□□□□ -1.93
YDR034C-D	YDR034C-D	AI5_ALPHA	Q9ZZX1	630 aa		2.98	□□□□□ -1.93
YDR034C-D	YDR034C-D	ADE5,7	P07244	802 aa	Known RBP	2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	RPL3	P14126	387 aa	Known RBP	2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	ASC1	P38011	319 aa	Known RBP	2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	LIN1	P38852	340 aa	Predicted RBP	2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	BPL1	P48445	690 aa	Predicted RBP	2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	PAN2	P53010	1115 aa	Predicted RBP	2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	FMP40	Q08968	688 aa	Predicted RBP	2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	YLR358C	O13565	187 aa		2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	SEC12	P11655	471 aa		2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	TAL1	P15019	335 aa	Known RBP	2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	DIA4	P38705	446 aa	Predicted RBP	2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	TIF4631	P39935	952 aa	Known RBP	2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	AIM22	P47051	409 aa		2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	RRN5	Q02983	363 aa		2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	ROT1	Q03691	256 aa		2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	YDR239C	Q03780	787 aa		2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	FRE3	Q08905	711 aa		2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	CLC1	P17891	233 aa		2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	ELO1	P39540	310 aa		2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	MEF2	P39677	819 aa		2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	SEC9	P40357	651 aa		2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	RPS10B	P46784	105 aa	Known RBP	2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	YJL132W	P47014	750 aa		2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	VID30	P53076	958 aa		2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	DIA2	Q08496	732 aa	Predicted RBP	2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	SPO7	P18410	259 aa		2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	YBR144C	P34215	104 aa		2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	PFF1	P38244	976 aa		2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	PKP1	P40530	394 aa		2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	FKH2	P41813	862 aa		2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	GCD14	P46959	383 aa	Predicted RBP	2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	RSM28	Q03430	361 aa		2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	UFO1	Q04511	668 aa		2.97	□□□□□ -1.93
YDR034C-D	YDR034C-D	PET111	P08468	800 aa		2.96	□□□□□ -1.93
YDR034C-D	YDR034C-D	PDE1	P22434	369 aa		2.96	□□□□□ -1.93
YDR034C-D	YDR034C-D	MRPL4	P36517	319 aa		2.96	□□□□□ -1.93
YDR034C-D	YDR034C-D	VPS45	P38932	577 aa		2.96	□□□□□ -1.93
YDR034C-D	YDR034C-D	BFR1	P38934	470 aa	Known RBP RIP-Chip data	2.96	□□□□□ -1.93	not detected
YDR034C-D	YDR034C-D	YNL144C	P53907	740 aa		2.96	□□□□□ -1.93
YDR034C-D	YDR034C-D	TDA6	Q06466	467 aa		2.96	□□□□□ -1.93
YDR034C-D	YDR034C-D	RPS10A	Q08745	105 aa	Predicted RBP	2.96	□□□□□ -1.93
YDR034C-D	YDR034C-D	PLP2	Q12017	286 aa		2.96	□□□□□ -1.93
YDR034C-D	YDR034C-D	AAC1	P04710	309 aa		2.96	□□□□□ -1.94
YDR034C-D	YDR034C-D	PRP6	P19735	899 aa	Predicted RBP	2.96	□□□□□ -1.94
YDR034C-D	YDR034C-D	MSB1	P21339	1137 aa	Known RBP	2.96	□□□□□ -1.94
YDR034C-D	YDR034C-D	CNA1	P23287	553 aa		2.96	□□□□□ -1.94
YDR034C-D	YDR034C-D	RAD51	P25454	400 aa		2.96	□□□□□ -1.94
YDR034C-D	YDR034C-D	ELF1	P36053	145 aa		2.96	□□□□□ -1.94
YDR034C-D	YDR034C-D	UIP3	P39547	235 aa		2.96	□□□□□ -1.94
YDR034C-D	YDR034C-D	COS5	P47187	383 aa		2.96	□□□□□ -1.94
YDR034C-D	YDR034C-D	YGR149W	P48236	432 aa		2.96	□□□□□ -1.94
YDR034C-D	YDR034C-D	BIO3	P50277	480 aa		2.96	□□□□□ -1.94
YDR034C-D	YDR034C-D	RPN9	Q04062	393 aa	Known RBP	2.96	□□□□□ -1.94
YDR034C-D	YDR034C-D	ADE13	Q05911	482 aa	Known RBP	2.96	□□□□□ -1.94
YDR034C-D	YDR034C-D	COS7	Q07788	383 aa		2.96	□□□□□ -1.94
YDR034C-D	YDR034C-D	GEP3	Q08622	556 aa		2.96	□□□□□ -1.94
YDR034C-D	YDR034C-D	ULA1	Q12059	462 aa		2.96	□□□□□ -1.94
YDR034C-D	YDR034C-D	PPH22	P23595	377 aa		2.96	□□□□□ -1.94
YDR034C-D	YDR034C-D	GCD7	P32502	381 aa	Predicted RBP	2.96	□□□□□ -1.94
YDR034C-D	YDR034C-D	CBF5	P33322	483 aa	Known RBP RIP-Chip data	2.96	□□□□□ -1.94	not detected
YDR034C-D	YDR034C-D	PHO11	P35842	467 aa		2.96	□□□□□ -1.94
YDR034C-D	YDR034C-D	PCA1	P38360	1216 aa		2.96	□□□□□ -1.94
YDR034C-D	YDR034C-D	MSG5	P38590	489 aa		2.96	□□□□□ -1.94
YDR034C-D	YDR034C-D	PHO12	P38693	467 aa		2.96	□□□□□ -1.94
YDR034C-D	YDR034C-D	IMD2	P38697	523 aa	Known RBP	2.96	□□□□□ -1.94
YDR034C-D	YDR034C-D	YDR179W-A	Q03983	463 aa		2.96	□□□□□ -1.94
YDR034C-D	YDR034C-D	YPL216W	Q08964	1102 aa		2.96	□□□□□ -1.94
YDR034C-D	YDR034C-D	CAD1	P24813	409 aa	Known RBP	2.96	□□□□□ -1.94
YDR034C-D	YDR034C-D	VHS2	P40463	436 aa		2.96	□□□□□ -1.94
YDR034C-D	YDR034C-D	LSB1	P53281	241 aa		2.96	□□□□□ -1.94
YDR034C-D	YDR034C-D	EAF7	P53911	425 aa	Known RBP	2.96	□□□□□ -1.94
YDR034C-D	YDR034C-D	RKM1	Q08961	583 aa	Predicted RBP	2.96	□□□□□ -1.94
YDR034C-D	YDR034C-D	MF(ALPHA)1	P01149	165 aa		2.95	□□□□□ -1.94
YDR034C-D	YDR034C-D	SUP35	P05453	685 aa	Known RBP	2.95	□□□□□ -1.94
YDR034C-D	YDR034C-D	ETP1	P38748	585 aa	Known RBP	2.95	□□□□□ -1.94
YDR034C-D	YDR034C-D	YFR020W	P43600	232 aa		2.95	□□□□□ -1.94
YDR034C-D	YDR034C-D	IRC8	P47046	822 aa		2.95	□□□□□ -1.94
YDR034C-D	YDR034C-D	PPM1	Q04081	328 aa		2.95	□□□□□ -1.94
YDR034C-D	YDR034C-D	TFB5	Q3E7C1	72 aa	Predicted RBP	2.95	□□□□□ -1.94
YDR034C-D	YDR034C-D	JIP3	O13555	125 aa		2.95	□□□□□ -1.94
YDR034C-D	YDR034C-D	CHO2	P05374	869 aa	Known RBP	2.95	□□□□□ -1.94
YDR034C-D	YDR034C-D	CHO1	P08456	276 aa		2.95	□□□□□ -1.94
YDR034C-D	YDR034C-D	RDS1	P25611	832 aa		2.95	□□□□□ -1.94
YDR034C-D	YDR034C-D	MMS4	P38257	691 aa		2.95	□□□□□ -1.94
YDR034C-D	YDR034C-D	FAD1	P38913	306 aa		2.95	□□□□□ -1.94
YDR034C-D	YDR034C-D	ECM10	P39987	644 aa		2.95	□□□□□ -1.94
YDR034C-D	YDR034C-D	ADE16	P54113	591 aa	Known RBP	2.95	□□□□□ -1.94
YDR034C-D	YDR034C-D	SKO1	Q02100	647 aa		2.95	□□□□□ -1.94
YDR034C-D	YDR034C-D	PDS5	Q04264	1277 aa		2.95	□□□□□ -1.94
YDR034C-D	YDR034C-D	SIL1	Q08199	421 aa		2.95	□□□□□ -1.94
YDR034C-D	YDR034C-D	APL5	Q08951	932 aa	Known RBP	2.95	□□□□□ -1.94
YDR034C-D	YDR034C-D	TY3A-G	Q12173	290 aa		2.95	□□□□□ -1.94
YDR034C-D	YDR034C-D	YER175W-A	Q8TGU4	54 aa		2.95	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms