RNA–Protein interactions for RNA: YBR106W

PHO88, Transcript of Probable membrane protein, yeastyeast

Gene PHO88, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO88YBR106W ECM22Q05958 814 aaPredicted RBP3.6□□□□□ -1.83
PHO88YBR106W YOR389WQ08912 624 aa3.6□□□□□ -1.83
PHO88YBR106W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
PHO88YBR106W TOP2P06786 1428 aaKnown RBP3.6□□□□□ -1.83
PHO88YBR106W ILS1P09436 1072 aaKnown RBP3.59□□□□□ -1.83
PHO88YBR106W PCT1P13259 424 aa3.59□□□□□ -1.83
PHO88YBR106W PMS1P14242 873 aa3.59□□□□□ -1.83
PHO88YBR106W AAD3P25612 363 aa3.59□□□□□ -1.83
PHO88YBR106W ADK2P26364 225 aa3.59□□□□□ -1.83
PHO88YBR106W YJU2P28320 278 aaPredicted RBP3.59□□□□□ -1.83
PHO88YBR106W SAC1P32368 623 aaKnown RBP3.59□□□□□ -1.83
PHO88YBR106W NIP100P33420 868 aa3.59□□□□□ -1.83
PHO88YBR106W SEC66P33754 206 aa3.59□□□□□ -1.83
PHO88YBR106W HCS1P34243 683 aa3.59□□□□□ -1.83
PHO88YBR106W RFC1P38630 861 aaKnown RBP3.59□□□□□ -1.83
PHO88YBR106W UBP8P50102 471 aa3.59□□□□□ -1.83
PHO88YBR106W ORC5P50874 479 aa3.59□□□□□ -1.83
PHO88YBR106W VPS73P53142 486 aaKnown RBP3.59□□□□□ -1.83
PHO88YBR106W ERG26P53199 349 aaKnown RBP3.59□□□□□ -1.83
PHO88YBR106W RSC1P53236 928 aa3.59□□□□□ -1.83
PHO88YBR106W ERO1Q03103 563 aa3.59□□□□□ -1.83
PHO88YBR106W ARO10Q06408 635 aa3.59□□□□□ -1.83
PHO88YBR106W IRC10Q08118 586 aa3.59□□□□□ -1.83
PHO88YBR106W MRH1Q12117 320 aaPredicted RBP3.59□□□□□ -1.83
PHO88YBR106W GET3Q12154 354 aaKnown RBP3.59□□□□□ -1.83
PHO88YBR106W SPE4Q12455 300 aa3.59□□□□□ -1.83
PHO88YBR106W PGA3Q12746 312 aaKnown RBP3.59□□□□□ -1.83
PHO88YBR106W NTE1Q04958 1679 aa3.59□□□□□ -1.84
PHO88YBR106W GAL80P04387 435 aa3.58□□□□□ -1.84
PHO88YBR106W ARG81P05085 880 aa3.58□□□□□ -1.84
PHO88YBR106W RAP1P11938 827 aa3.58□□□□□ -1.84
PHO88YBR106W STE12P13574 688 aa3.58□□□□□ -1.84
PHO88YBR106W ART10P18634 518 aaKnown RBP3.58□□□□□ -1.84
PHO88YBR106W YCR051WP25631 222 aa3.58□□□□□ -1.84
PHO88YBR106W GSY2P27472 705 aa3.58□□□□□ -1.84
PHO88YBR106W GSH1P32477 678 aa3.58□□□□□ -1.84
PHO88YBR106W TCD2P36101 447 aaKnown RBP3.58□□□□□ -1.84
PHO88YBR106W APE3P37302 537 aaKnown RBP3.58□□□□□ -1.84
PHO88YBR106W ADE17P38009 592 aaKnown RBP3.58□□□□□ -1.84
PHO88YBR106W CIN4P39110 191 aa3.58□□□□□ -1.84
PHO88YBR106W ELO1P39540 310 aa3.58□□□□□ -1.84
PHO88YBR106W PES4P39684 611 aa3.58□□□□□ -1.84
PHO88YBR106W YEL057CP39983 233 aa3.58□□□□□ -1.84
PHO88YBR106W HXT14P42833 540 aa3.58□□□□□ -1.84
PHO88YBR106W YJL043WP47053 257 aa3.58□□□□□ -1.84
PHO88YBR106W GND2P53319 492 aa3.58□□□□□ -1.84
PHO88YBR106W YNL144CP53907 740 aa3.58□□□□□ -1.84
PHO88YBR106W BUD7Q08754 746 aa3.58□□□□□ -1.84
PHO88YBR106W CIR2Q08822 631 aa3.58□□□□□ -1.84
PHO88YBR106W RDL1Q12305 139 aaKnown RBP3.58□□□□□ -1.84
PHO88YBR106W TY1B-AO13527 1196 aaKnown RBP3.57□□□□□ -1.84
PHO88YBR106W RPO21P04050 1733 aaKnown RBP3.57□□□□□ -1.84
PHO88YBR106W EST1P17214 699 aaPredicted RBP3.57□□□□□ -1.84
PHO88YBR106W BUD5P25300 642 aaPredicted RBP3.57□□□□□ -1.84
PHO88YBR106W STE50P25344 346 aa3.57□□□□□ -1.84
PHO88YBR106W PRD1P25375 712 aa3.57□□□□□ -1.84
PHO88YBR106W PUP3P25451 205 aaKnown RBP3.57□□□□□ -1.84
PHO88YBR106W IMG1P25626 169 aa3.57□□□□□ -1.84
PHO88YBR106W YME1P32795 747 aa3.57□□□□□ -1.84
PHO88YBR106W SRO77P38163 1010 aa3.57□□□□□ -1.84
PHO88YBR106W DBP8P38719 431 aa3.57□□□□□ -1.84
PHO88YBR106W CCT6P39079 546 aa3.57□□□□□ -1.84
PHO88YBR106W DOT5P40553 215 aa3.57□□□□□ -1.84
PHO88YBR106W DLD2P46681 530 aaKnown RBP3.57□□□□□ -1.84
PHO88YBR106W URB2P47108 1174 aa3.57□□□□□ -1.84
PHO88YBR106W LYS4P49367 693 aaPredicted RBP3.57□□□□□ -1.84
PHO88YBR106W EMI2Q04409 500 aaKnown RBP3.57□□□□□ -1.84
PHO88YBR106W DPB4Q04603 196 aaKnown RBP3.57□□□□□ -1.84
PHO88YBR106W SWF1Q04629 336 aa3.57□□□□□ -1.84
PHO88YBR106W MRD1Q06106 887 aaKnown RBP3.57□□□□□ -1.84
PHO88YBR106W YLR455WQ06188 304 aa3.57□□□□□ -1.84
PHO88YBR106W CYK3Q07533 885 aa3.57□□□□□ -1.84
PHO88YBR106W PCL8Q08966 492 aa3.57□□□□□ -1.84
PHO88YBR106W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
PHO88YBR106W HSP42Q12329 375 aa3.57□□□□□ -1.84
PHO88YBR106W CPR2P23285 205 aa3.56□□□□□ -1.84
PHO88YBR106W GPI10P30777 616 aa3.56□□□□□ -1.84
PHO88YBR106W WBP1P33767 430 aaKnown RBP3.56□□□□□ -1.84
PHO88YBR106W GDT1P38301 280 aaPredicted RBP3.56□□□□□ -1.84
PHO88YBR106W NTC20P38302 140 aaPredicted RBP3.56□□□□□ -1.84
PHO88YBR106W FTH1P38310 465 aa3.56□□□□□ -1.84
PHO88YBR106W TSC10P38342 320 aa3.56□□□□□ -1.84
PHO88YBR106W MSR1P38714 643 aa3.56□□□□□ -1.84
PHO88YBR106W GDI1P39958 451 aaKnown RBP3.56□□□□□ -1.84
PHO88YBR106W ALK1P43633 760 aaKnown RBP3.56□□□□□ -1.84
PHO88YBR106W SAE2P46946 345 aa3.56□□□□□ -1.84
PHO88YBR106W PET130P47065 347 aa3.56□□□□□ -1.84
PHO88YBR106W RPS7BP48164 190 aaKnown RBP3.56□□□□□ -1.84
PHO88YBR106W APT1P49435 187 aaKnown RBP3.56□□□□□ -1.84
PHO88YBR106W FMS1P50264 508 aa3.56□□□□□ -1.84
PHO88YBR106W MNP1P53163 194 aaPredicted RBP3.56□□□□□ -1.84
PHO88YBR106W ART5P53244 586 aaKnown RBP3.56□□□□□ -1.84
PHO88YBR106W KAP120Q02932 1032 aa3.56□□□□□ -1.84
PHO88YBR106W YDR131CQ03899 556 aa3.56□□□□□ -1.84
PHO88YBR106W DON1Q05610 365 aa3.56□□□□□ -1.84
PHO88YBR106W ORM2Q06144 216 aa3.56□□□□□ -1.84
PHO88YBR106W RAD34Q06665 692 aa3.56□□□□□ -1.84
PHO88YBR106W MED2Q12124 431 aa3.56□□□□□ -1.84
PHO88YBR106W Q0010Q9ZZX9 128 aa3.56□□□□□ -1.84
PHO88YBR106W DOP1Q03921 1698 aa3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms