RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 LINC01599Q8WXQ3 324 aa7.58□□□□□ -1.2
LINC00254-201ENST00000563416 MAP6Q96JE9 813 aa7.58□□□□□ -1.2
LINC00254-201ENST00000563416 FAM53CQ9NYF3 392 aa7.58□□□□□ -1.2
LINC00254-201ENST00000563416 FYB2Q5VWT5 728 aa7.57□□□□□ -1.2
LINC00254-201ENST00000563416 ADCY4Q8NFM4 1077 aa7.57□□□□□ -1.2
LINC00254-201ENST00000563416 FGD4Q96M96 766 aa7.57□□□□□ -1.2
LINC00254-201ENST00000563416 ZDHHC15Q96MV8 337 aa7.57□□□□□ -1.2
LINC00254-201ENST00000563416 APBA2Q99767 749 aa7.57□□□□□ -1.2
LINC00254-201ENST00000563416 TNFRSF10DQ9UBN6 386 aa7.57□□□□□ -1.2
LINC00254-201ENST00000563416 DNMBPQ6XZF7 1577 aa7.57□□□□□ -1.2
LINC00254-201ENST00000563416 CARMIL2Q6F5E8 1435 aa7.56□□□□□ -1.2
LINC00254-201ENST00000563416 DDAH1O94760 285 aa7.56□□□□□ -1.2
LINC00254-201ENST00000563416 TXKP42681 527 aa7.56□□□□□ -1.2
LINC00254-201ENST00000563416 ERVFC1P60507 584 aa7.56□□□□□ -1.2
LINC00254-201ENST00000563416 PPP2R5DQ14738 602 aa7.56□□□□□ -1.2
LINC00254-201ENST00000563416 SNX17Q15036 470 aa7.56□□□□□ -1.2
LINC00254-201ENST00000563416 SLC14A2Q15849 920 aa7.56□□□□□ -1.2
LINC00254-201ENST00000563416 MPZL3Q6UWV2 235 aa7.56□□□□□ -1.2
LINC00254-201ENST00000563416 C6orf15Q6UXA7 325 aaPredicted RBP7.56□□□□□ -1.2
LINC00254-201ENST00000563416 FAM178BQ8IXR5 827 aa7.56□□□□□ -1.2
LINC00254-201ENST00000563416 NAT16Q8N8M0 369 aa7.56□□□□□ -1.2
LINC00254-201ENST00000563416 RCC1LQ96I51 464 aaKnown RBP7.56□□□□□ -1.2
LINC00254-201ENST00000563416 G6PC3Q9BUM1 346 aa7.56□□□□□ -1.2
LINC00254-201ENST00000563416 TANGO6Q9C0B7 1094 aa7.56□□□□□ -1.2
LINC00254-201ENST00000563416 CWC22Q9HCG8 908 aaKnown RBP7.56□□□□□ -1.2
LINC00254-201ENST00000563416 STK10O94804 968 aaKnown RBP7.55□□□□□ -1.2
LINC00254-201ENST00000563416 GSTM1P09488 218 aa7.55□□□□□ -1.2
LINC00254-201ENST00000563416 ATP2B1P20020 1258 aa7.55□□□□□ -1.2
LINC00254-201ENST00000563416 POMZP3Q6PJE2 187 aa7.55□□□□□ -1.2
LINC00254-201ENST00000563416 CEP128Q6ZU80 1094 aa7.55□□□□□ -1.2
LINC00254-201ENST00000563416 ANKS3Q6ZW76 656 aa7.55□□□□□ -1.2
LINC00254-201ENST00000563416 FMNL2Q96PY5 1086 aa7.55□□□□□ -1.2
LINC00254-201ENST00000563416 SLC12A9Q9BXP2 914 aa7.55□□□□□ -1.2
LINC00254-201ENST00000563416 AP5S1Q9NUS5 200 aa7.55□□□□□ -1.2
LINC00254-201ENST00000563416 GPR160Q9UJ42 338 aa7.55□□□□□ -1.2
LINC00254-201ENST00000563416 ABCC8Q09428 1581 aa7.54□□□□□ -1.2
LINC00254-201ENST00000563416 TOPBP1Q92547 1522 aa7.54□□□□□ -1.2
LINC00254-201ENST00000563416 NOP56O00567 594 aaKnown RBP7.54□□□□□ -1.2
LINC00254-201ENST00000563416 USP2O75604 605 aaPredicted RBP7.54□□□□□ -1.2
LINC00254-201ENST00000563416 CD3EP07766 207 aa7.54□□□□□ -1.2
LINC00254-201ENST00000563416 GRB10Q13322 594 aa7.54□□□□□ -1.2
LINC00254-201ENST00000563416 CYP2R1Q6VVX0 501 aa7.54□□□□□ -1.2
LINC00254-201ENST00000563416 ZPBP2Q6X784 338 aa7.54□□□□□ -1.2
LINC00254-201ENST00000563416 ARHGEF39Q8N4T4 335 aa7.54□□□□□ -1.2
LINC00254-201ENST00000563416 HHIPL1Q96JK4 782 aa7.54□□□□□ -1.2
LINC00254-201ENST00000563416 C19orf44Q9H6X5 657 aa7.54□□□□□ -1.2
LINC00254-201ENST00000563416 ERVK13-1Q9NX77 482 aa7.54□□□□□ -1.2
LINC00254-201ENST00000563416 PPP1R1BQ9UD71 204 aaPredicted RBP7.54□□□□□ -1.2
LINC00254-201ENST00000563416 CGGBP1Q9UFW8 167 aaPredicted RBP7.54□□□□□ -1.2
LINC00254-201ENST00000563416 EBF1Q9UH73 591 aa7.54□□□□□ -1.2
LINC00254-201ENST00000563416 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.54□□□□□ -1.2
LINC00254-201ENST00000563416 NRDCO43847 1150 aa7.53□□□□□ -1.2
LINC00254-201ENST00000563416 TRHRP34981 398 aaPredicted RBP7.53□□□□□ -1.2
LINC00254-201ENST00000563416 RTP1P59025 263 aa7.53□□□□□ -1.2
LINC00254-201ENST00000563416 AMPD2Q01433 879 aa7.53□□□□□ -1.2
LINC00254-201ENST00000563416 RTP2Q5QGT7 225 aa7.53□□□□□ -1.2
LINC00254-201ENST00000563416 CKAP2LQ8IYA6 745 aa7.53□□□□□ -1.2
LINC00254-201ENST00000563416 BVESQ8NE79 360 aa7.53□□□□□ -1.2
LINC00254-201ENST00000563416 HNRNPLLQ8WVV9 542 aaKnown RBP7.53□□□□□ -1.2
LINC00254-201ENST00000563416 PPP1R14AQ96A00 147 aa7.53□□□□□ -1.2
LINC00254-201ENST00000563416 SP110Q9HB58 689 aa7.53□□□□□ -1.2
LINC00254-201ENST00000563416 SUSD2Q9UGT4 822 aa7.53□□□□□ -1.2
LINC00254-201ENST00000563416 AKT3Q9Y243 479 aa7.53□□□□□ -1.2
LINC00254-201ENST00000563416 WDR97A6NE52 1622 aa7.52□□□□□ -1.2
LINC00254-201ENST00000563416 TARBP1Q13395 1621 aaKnown RBP7.52□□□□□ -1.2
LINC00254-201ENST00000563416 A0A1W2PQ45 241 aaPredicted RBP7.52□□□□□ -1.21
LINC00254-201ENST00000563416 A0A1W2PQY0 241 aa7.52□□□□□ -1.21
LINC00254-201ENST00000563416 ZNF503-AS2A6NEH8 195 aa7.52□□□□□ -1.21
LINC00254-201ENST00000563416 LRRC10BA6NIK2 292 aa7.52□□□□□ -1.21
LINC00254-201ENST00000563416 WTIPA6NIX2 430 aaPredicted RBP7.52□□□□□ -1.21
LINC00254-201ENST00000563416 HLA-DQA1Q5Y7H0 255 aa7.52□□□□□ -1.21
LINC00254-201ENST00000563416 GALNT18Q6P9A2 607 aa7.52□□□□□ -1.21
LINC00254-201ENST00000563416 EEPD1Q7L9B9 569 aa7.52□□□□□ -1.21
LINC00254-201ENST00000563416 FCRL3Q96P31 734 aaPredicted RBP7.52□□□□□ -1.21
LINC00254-201ENST00000563416 TRIM55Q9BYV6 548 aa7.52□□□□□ -1.21
LINC00254-201ENST00000563416 RNF32Q9H0A6 362 aa7.52□□□□□ -1.21
LINC00254-201ENST00000563416 SLC6A17Q9H1V8 727 aa7.52□□□□□ -1.21
LINC00254-201ENST00000563416 GPR55Q9Y2T6 319 aaPredicted RBP7.52□□□□□ -1.21
LINC00254-201ENST00000563416 TAF6LQ9Y6J9 622 aa7.52□□□□□ -1.21
LINC00254-201ENST00000563416 BIVM-ERCC5R4GMW8 1640 aa7.52□□□□□ -1.21
LINC00254-201ENST00000563416 FADS2P1A8MWK0 482 aa7.51□□□□□ -1.21
LINC00254-201ENST00000563416 B2RBV5 119 aa7.51□□□□□ -1.21
LINC00254-201ENST00000563416 FGF10O15520 208 aaPredicted RBP7.51□□□□□ -1.21
LINC00254-201ENST00000563416 TBC1D8O95759 1140 aa7.51□□□□□ -1.21
LINC00254-201ENST00000563416 SF3A1Q15459 793 aaKnown RBP7.51□□□□□ -1.21
LINC00254-201ENST00000563416 SV2CQ496J9 727 aa7.51□□□□□ -1.21
LINC00254-201ENST00000563416 EEF1DP3Q658K8 133 aa7.51□□□□□ -1.21
LINC00254-201ENST00000563416 LIN37Q96GY3 246 aaPredicted RBP7.51□□□□□ -1.21
LINC00254-201ENST00000563416 EPN3Q9H201 632 aa7.51□□□□□ -1.21
LINC00254-201ENST00000563416 LRP2BPQ9P2M1 347 aa7.51□□□□□ -1.21
LINC00254-201ENST00000563416 APEX2Q9UBZ4 518 aa7.51□□□□□ -1.21
LINC00254-201ENST00000563416 AGRPO00253 132 aa7.5□□□□□ -1.21
LINC00254-201ENST00000563416 AURKAO14965 403 aa7.5□□□□□ -1.21
LINC00254-201ENST00000563416 U2SURPO15042 1029 aaKnown RBP7.5□□□□□ -1.21
LINC00254-201ENST00000563416 KLF4O43474 513 aa7.5□□□□□ -1.21
LINC00254-201ENST00000563416 SUSD5O60279 629 aa7.5□□□□□ -1.21
LINC00254-201ENST00000563416 PSPNO60542 156 aa7.5□□□□□ -1.21
LINC00254-201ENST00000563416 VAMP4O75379 141 aa7.5□□□□□ -1.21
LINC00254-201ENST00000563416 GJB6O95452 261 aa7.5□□□□□ -1.21
LINC00254-201ENST00000563416 IFNGR1P15260 489 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms