RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 C19orf44Q9H6X5 657 aa4.96□□□□□ -1.62
RBM28-207ENST00000488249 ST7Q9NRC1 585 aa4.96□□□□□ -1.62
RBM28-207ENST00000488249 CGGBP1Q9UFW8 167 aaPredicted RBP4.96□□□□□ -1.62
RBM28-207ENST00000488249 FADS2P1A8MWK0 482 aa4.95□□□□□ -1.62
RBM28-207ENST00000488249 PAX4O43316 350 aa4.95□□□□□ -1.62
RBM28-207ENST00000488249 SUSD5O60279 629 aa4.95□□□□□ -1.62
RBM28-207ENST00000488249 VAMP4O75379 141 aa4.95□□□□□ -1.62
RBM28-207ENST00000488249 USP2O75604 605 aaPredicted RBP4.95□□□□□ -1.62
RBM28-207ENST00000488249 CD3EP07766 207 aa4.95□□□□□ -1.62
RBM28-207ENST00000488249 GLI1P08151 1106 aa4.95□□□□□ -1.62
RBM28-207ENST00000488249 GTF2F1P35269 517 aaKnown RBP eCLIP4.95□□□□□ -1.62
RBM28-207ENST00000488249 GRB10Q13322 594 aa4.95□□□□□ -1.62
RBM28-207ENST00000488249 RAB33AQ14088 237 aa4.95□□□□□ -1.62
RBM28-207ENST00000488249 DDR2Q16832 855 aa4.95□□□□□ -1.62
RBM28-207ENST00000488249 CKAP2LQ8IYA6 745 aa4.95□□□□□ -1.62
RBM28-207ENST00000488249 BVESQ8NE79 360 aa4.95□□□□□ -1.62
RBM28-207ENST00000488249 ERVK13-1Q9NX77 482 aa4.95□□□□□ -1.62
RBM28-207ENST00000488249 TNFRSF10DQ9UBN6 386 aa4.95□□□□□ -1.62
RBM28-207ENST00000488249 PPP1R1BQ9UD71 204 aaPredicted RBP4.95□□□□□ -1.62
RBM28-207ENST00000488249 AKT3Q9Y243 479 aa4.95□□□□□ -1.62
RBM28-207ENST00000488249 EMC9Q9Y3B6 208 aa4.95□□□□□ -1.62
RBM28-207ENST00000488249 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.95□□□□□ -1.62
RBM28-207ENST00000488249 ZNF503-AS2A6NEH8 195 aa4.94□□□□□ -1.62
RBM28-207ENST00000488249 NOTOA8MTQ0 251 aa4.94□□□□□ -1.62
RBM28-207ENST00000488249 NOP56O00567 594 aaKnown RBP4.94□□□□□ -1.62
RBM28-207ENST00000488249 NRDCO43847 1150 aa4.94□□□□□ -1.62
RBM28-207ENST00000488249 PSPNO60542 156 aa4.94□□□□□ -1.62
RBM28-207ENST00000488249 IFNGR1P15260 489 aa4.94□□□□□ -1.62
RBM28-207ENST00000488249 AMPD2Q01433 879 aa4.94□□□□□ -1.62
RBM28-207ENST00000488249 SNX17Q15036 470 aa4.94□□□□□ -1.62
RBM28-207ENST00000488249 SF3A1Q15459 793 aaKnown RBP4.94□□□□□ -1.62
RBM28-207ENST00000488249 SLC14A2Q15849 920 aa4.94□□□□□ -1.62
RBM28-207ENST00000488249 DPY19L1Q2PZI1 675 aa4.94□□□□□ -1.62
RBM28-207ENST00000488249 TIGD5Q53EQ6 642 aa4.94□□□□□ -1.62
RBM28-207ENST00000488249 POMZP3Q6PJE2 187 aa4.94□□□□□ -1.62
RBM28-207ENST00000488249 CEP128Q6ZU80 1094 aa4.94□□□□□ -1.62
RBM28-207ENST00000488249 EEPD1Q7L9B9 569 aa4.94□□□□□ -1.62
RBM28-207ENST00000488249 CRACR2BQ8N4Y2 399 aaPredicted RBP4.94□□□□□ -1.62
RBM28-207ENST00000488249 NAT16Q8N8M0 369 aa4.94□□□□□ -1.62
RBM28-207ENST00000488249 TMEM52Q8NDY8 209 aa4.94□□□□□ -1.62
RBM28-207ENST00000488249 PPP1R14AQ96A00 147 aa4.94□□□□□ -1.62
RBM28-207ENST00000488249 ARMC5Q96C12 935 aa4.94□□□□□ -1.62
RBM28-207ENST00000488249 MCMBPQ9BTE3 642 aa4.94□□□□□ -1.62
RBM28-207ENST00000488249 TRIM55Q9BYV6 548 aa4.94□□□□□ -1.62
RBM28-207ENST00000488249 RNF114Q9Y508 228 aa4.94□□□□□ -1.62
RBM28-207ENST00000488249 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.93□□□□□ -1.62
RBM28-207ENST00000488249 AURKAO14965 403 aa4.93□□□□□ -1.62
RBM28-207ENST00000488249 FGF10O15520 208 aaPredicted RBP4.93□□□□□ -1.62
RBM28-207ENST00000488249 KCNH1O95259 989 aa4.93□□□□□ -1.62
RBM28-207ENST00000488249 CEBPAP49715 358 aaPredicted RBP4.93□□□□□ -1.62
RBM28-207ENST00000488249 RTP1P59025 263 aa4.93□□□□□ -1.62
RBM28-207ENST00000488249 SV2CQ496J9 727 aa4.93□□□□□ -1.62
RBM28-207ENST00000488249 NBPF6Q5VWK0 638 aa4.93□□□□□ -1.62
RBM28-207ENST00000488249 RCSD1Q6JBY9 416 aa4.93□□□□□ -1.62
RBM28-207ENST00000488249 MRGPRX3Q96LB0 322 aa4.93□□□□□ -1.62
RBM28-207ENST00000488249 NBPF4Q96M43 638 aa4.93□□□□□ -1.62
RBM28-207ENST00000488249 HIRIP3Q9BW71 556 aaPredicted RBP4.93□□□□□ -1.62
RBM28-207ENST00000488249 KRTAP9-9Q9BYP9 154 aa4.93□□□□□ -1.62
RBM28-207ENST00000488249 KRTAP9-4Q9BYQ2 154 aa4.93□□□□□ -1.62
RBM28-207ENST00000488249 RNF32Q9H0A6 362 aa4.93□□□□□ -1.62
RBM28-207ENST00000488249 EPN3Q9H201 632 aa4.93□□□□□ -1.62
RBM28-207ENST00000488249 GPR160Q9UJ42 338 aa4.93□□□□□ -1.62
RBM28-207ENST00000488249 GPR55Q9Y2T6 319 aaPredicted RBP4.93□□□□□ -1.62
RBM28-207ENST00000488249 A0A1W2PQ45 241 aaPredicted RBP4.92□□□□□ -1.62
RBM28-207ENST00000488249 A0A1W2PQY0 241 aa4.92□□□□□ -1.62
RBM28-207ENST00000488249 C2orf71A6NGG8 1288 aa4.92□□□□□ -1.62
RBM28-207ENST00000488249 WTIPA6NIX2 430 aaPredicted RBP4.92□□□□□ -1.62
RBM28-207ENST00000488249 STXBP3O00186 592 aa4.92□□□□□ -1.62
RBM28-207ENST00000488249 U2SURPO15042 1029 aaKnown RBP4.92□□□□□ -1.62
RBM28-207ENST00000488249 EFEMP2O95967 443 aa4.92□□□□□ -1.62
RBM28-207ENST00000488249 RBL2Q08999 1139 aa4.92□□□□□ -1.62
RBM28-207ENST00000488249 HSF5Q4G112 596 aaPredicted RBP4.92□□□□□ -1.62
RBM28-207ENST00000488249 HLA-DQA1Q5Y7H0 255 aa4.92□□□□□ -1.62
RBM28-207ENST00000488249 EEF1DP3Q658K8 133 aa4.92□□□□□ -1.62
RBM28-207ENST00000488249 CYP2R1Q6VVX0 501 aa4.92□□□□□ -1.62
RBM28-207ENST00000488249 SLCO6A1Q86UG4 719 aa4.92□□□□□ -1.62
RBM28-207ENST00000488249 NLRX1Q86UT6 975 aa4.92□□□□□ -1.62
RBM28-207ENST00000488249 TRIM59Q8IWR1 403 aa4.92□□□□□ -1.62
RBM28-207ENST00000488249 SREK1Q8WXA9 508 aaKnown RBP4.92□□□□□ -1.62
RBM28-207ENST00000488249 SHISA4Q96DD7 197 aa4.92□□□□□ -1.62
RBM28-207ENST00000488249 LIN37Q96GY3 246 aaPredicted RBP4.92□□□□□ -1.62
RBM28-207ENST00000488249 PTCHD1Q96NR3 888 aa4.92□□□□□ -1.62
RBM28-207ENST00000488249 FMNL2Q96PY5 1086 aa4.92□□□□□ -1.62
RBM28-207ENST00000488249 KRTAP4-12Q9BQ66 201 aa4.92□□□□□ -1.62
RBM28-207ENST00000488249 LGR4Q9BXB1 951 aa4.92□□□□□ -1.62
RBM28-207ENST00000488249 CWC22Q9HCG8 908 aaKnown RBP4.92□□□□□ -1.62
RBM28-207ENST00000488249 FAM53CQ9NYF3 392 aa4.92□□□□□ -1.62
RBM28-207ENST00000488249 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.92□□□□□ -1.62
RBM28-207ENST00000488249 LRP2BPQ9P2M1 347 aa4.92□□□□□ -1.62
RBM28-207ENST00000488249 BACE2Q9Y5Z0 518 aa4.92□□□□□ -1.62
RBM28-207ENST00000488249 TBC1D8O95759 1140 aa4.91□□□□□ -1.62
RBM28-207ENST00000488249 ITGAVP06756 1048 aa4.91□□□□□ -1.62
RBM28-207ENST00000488249 SEPHS1P49903 392 aa4.91□□□□□ -1.62
RBM28-207ENST00000488249 SLC10A6Q3KNW5 377 aa4.91□□□□□ -1.62
RBM28-207ENST00000488249 GTF2IRD2BQ6EKJ0 949 aa4.91□□□□□ -1.62
RBM28-207ENST00000488249 GALNT18Q6P9A2 607 aa4.91□□□□□ -1.62
RBM28-207ENST00000488249 MPZL3Q6UWV2 235 aa4.91□□□□□ -1.62
RBM28-207ENST00000488249 GTF2IRD2Q86UP8 949 aa4.91□□□□□ -1.62
RBM28-207ENST00000488249 ZNF227Q86WZ6 799 aa4.91□□□□□ -1.62
RBM28-207ENST00000488249 JMJD8Q96S16 334 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms