RNA–Protein interactions for RNA: ENST00000227266.9

CTSC-201, Transcript of cathepsin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSC, Length 1,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-201ENST00000227266 PTPN18Q99952 460 aa12.83□□□□□ -0.36
CTSC-201ENST00000227266 VPS54Q9P1Q0 977 aa12.83□□□□□ -0.36
CTSC-201ENST00000227266 BAZ2BQ9UIF8 2168 aaKnown RBP12.82□□□□□ -0.36
CTSC-201ENST00000227266 VPS37CA5D8V6 355 aaPredicted RBP12.82□□□□□ -0.36
CTSC-201ENST00000227266 SPDYE16A6NNV3 312 aaPredicted RBP12.82□□□□□ -0.36
CTSC-201ENST00000227266 H3BQV1 296 aa12.82□□□□□ -0.36
CTSC-201ENST00000227266 VWA5AO00534 786 aa12.82□□□□□ -0.36
CTSC-201ENST00000227266 ZBED4O75132 1171 aa12.82□□□□□ -0.36
CTSC-201ENST00000227266 OSBPP22059 807 aa12.82□□□□□ -0.36
CTSC-201ENST00000227266 HTRA3P83110 453 aa12.82□□□□□ -0.36
CTSC-201ENST00000227266 TRIM29Q14134 588 aa12.82□□□□□ -0.36
CTSC-201ENST00000227266 USH1GQ495M9 461 aa12.82□□□□□ -0.36
CTSC-201ENST00000227266 IFFO2Q5TF58 517 aa12.82□□□□□ -0.36
CTSC-201ENST00000227266 CPXCR1Q8N123 301 aa12.82□□□□□ -0.36
CTSC-201ENST00000227266 FAM43AQ8N2R8 423 aa12.82□□□□□ -0.36
CTSC-201ENST00000227266 COA7Q96BR5 231 aa12.82□□□□□ -0.36
CTSC-201ENST00000227266 RANBP17Q9H2T7 1088 aaKnown RBP12.82□□□□□ -0.36
CTSC-201ENST00000227266 RASSF10A6NK89 507 aa12.82□□□□□ -0.36
CTSC-201ENST00000227266 CYP2C8P10632 490 aa12.82□□□□□ -0.36
CTSC-201ENST00000227266 TAL1P17542 331 aaPredicted RBP12.82□□□□□ -0.36
CTSC-201ENST00000227266 XBP1P17861 261 aa12.82□□□□□ -0.36
CTSC-201ENST00000227266 DDIT3P35638 169 aa12.82□□□□□ -0.36
CTSC-201ENST00000227266 PKP1Q13835 747 aa12.82□□□□□ -0.36
CTSC-201ENST00000227266 ANKRD23Q86SG2 305 aa12.82□□□□□ -0.36
CTSC-201ENST00000227266 FBXO11Q86XK2 927 aa12.82□□□□□ -0.36
CTSC-201ENST00000227266 CAPNS2Q96L46 248 aa12.82□□□□□ -0.36
CTSC-201ENST00000227266 ZIC5Q96T25 663 aa12.82□□□□□ -0.36
CTSC-201ENST00000227266 SLC38A10Q9HBR0 1119 aa12.82□□□□□ -0.36
CTSC-201ENST00000227266 RAVER2Q9HCJ3 691 aaKnown RBP12.82□□□□□ -0.36
CTSC-201ENST00000227266 BARHL2Q9NY43 387 aa12.82□□□□□ -0.36
CTSC-201ENST00000227266 KCNJ14Q9UNX9 436 aa12.82□□□□□ -0.36
CTSC-201ENST00000227266 PCDHA1Q9Y5I3 950 aa12.82□□□□□ -0.36
CTSC-201ENST00000227266 STXBP3O00186 592 aa12.81□□□□□ -0.36
CTSC-201ENST00000227266 STX6O43752 255 aa12.81□□□□□ -0.36
CTSC-201ENST00000227266 NAPAP54920 295 aa12.81□□□□□ -0.36
CTSC-201ENST00000227266 HERVK_113P62684 666 aa12.81□□□□□ -0.36
CTSC-201ENST00000227266 FOXD4L5Q5VV16 416 aaPredicted RBP12.81□□□□□ -0.36
CTSC-201ENST00000227266 KRT40Q6A162 431 aa12.81□□□□□ -0.36
CTSC-201ENST00000227266 TYW1BQ6NUM6 668 aa12.81□□□□□ -0.36
CTSC-201ENST00000227266 FOXD4L4Q8WXT5 416 aaPredicted RBP12.81□□□□□ -0.36
CTSC-201ENST00000227266 AGBL1Q96MI9 1066 aa12.81□□□□□ -0.36
CTSC-201ENST00000227266 AMNQ9BXJ7 453 aa12.81□□□□□ -0.36
CTSC-201ENST00000227266 PNMA3Q9UL41 463 aa12.81□□□□□ -0.36
CTSC-201ENST00000227266 MYPNQ86TC9 1320 aa12.8□□□□□ -0.36
CTSC-201ENST00000227266 TESPA1A2RU30 521 aaPredicted RBP12.8□□□□□ -0.36
CTSC-201ENST00000227266 AOC2O75106 756 aa12.8□□□□□ -0.36
CTSC-201ENST00000227266 KIF23Q02241 960 aaPredicted RBP12.8□□□□□ -0.36
CTSC-201ENST00000227266 PLS1Q14651 629 aa12.8□□□□□ -0.36
CTSC-201ENST00000227266 FBXO18Q8NFZ0 1043 aa12.8□□□□□ -0.36
CTSC-201ENST00000227266 SMCR8Q8TEV9 937 aaPredicted RBP12.8□□□□□ -0.36
CTSC-201ENST00000227266 SHISA4Q96DD7 197 aa12.8□□□□□ -0.36
CTSC-201ENST00000227266 CCPG1Q9ULG6 757 aa12.8□□□□□ -0.36
CTSC-201ENST00000227266 ADAMTS5Q9UNA0 930 aa12.8□□□□□ -0.36
CTSC-201ENST00000227266 IGF2BP3O00425 579 aaKnown RBP eCLIP12.8□□□□□ -0.36
CTSC-201ENST00000227266 PEX10O60683 326 aa12.8□□□□□ -0.36
CTSC-201ENST00000227266 ICAM1P05362 532 aa12.8□□□□□ -0.36
CTSC-201ENST00000227266 FDX1P10109 184 aa12.8□□□□□ -0.36
CTSC-201ENST00000227266 NLRP5P59047 1200 aa12.8□□□□□ -0.36
CTSC-201ENST00000227266 SREBF2Q12772 1141 aa12.8□□□□□ -0.36
CTSC-201ENST00000227266 NOGQ13253 232 aa12.8□□□□□ -0.36
CTSC-201ENST00000227266 MCTP1Q6DN14 999 aa12.8□□□□□ -0.36
CTSC-201ENST00000227266 PAGR1Q9BTK6 254 aa12.8□□□□□ -0.36
CTSC-201ENST00000227266 SLC45A1Q9Y2W3 748 aa12.8□□□□□ -0.36
CTSC-201ENST00000227266 ZNF536O15090 1300 aa12.79□□□□□ -0.36
CTSC-201ENST00000227266 hCG_1984214I3L0E3 225 aa12.79□□□□□ -0.36
CTSC-201ENST00000227266 INHBEP58166 350 aa12.79□□□□□ -0.36
CTSC-201ENST00000227266 TMEM132BQ14DG7 1078 aa12.79□□□□□ -0.36
CTSC-201ENST00000227266 POTEEQ6S8J3 1075 aa12.79□□□□□ -0.36
CTSC-201ENST00000227266 ZNF713Q8N859 430 aaPredicted RBP12.79□□□□□ -0.36
CTSC-201ENST00000227266 REPS2Q8NFH8 660 aa12.79□□□□□ -0.36
CTSC-201ENST00000227266 CCDC148Q8NFR7 591 aa12.79□□□□□ -0.36
CTSC-201ENST00000227266 CCDC12Q8WUD4 166 aaPredicted RBP12.79□□□□□ -0.36
CTSC-201ENST00000227266 SH3GLB2Q9NR46 395 aa12.79□□□□□ -0.36
CTSC-201ENST00000227266 HOMER2Q9NSB8 354 aa12.79□□□□□ -0.36
CTSC-201ENST00000227266 CIZ1Q9ULV3 898 aaPredicted RBP12.79□□□□□ -0.36
CTSC-201ENST00000227266 MTMR6Q9Y217 621 aa12.79□□□□□ -0.36
CTSC-201ENST00000227266 LOC285556D6RIA3 1793 aa12.79□□□□□ -0.36
CTSC-201ENST00000227266 PTPRFP10586 1907 aa12.79□□□□□ -0.36
CTSC-201ENST00000227266 ALAS1P13196 640 aa12.78□□□□□ -0.36
CTSC-201ENST00000227266 TRAF1Q13077 416 aa12.78□□□□□ -0.36
CTSC-201ENST00000227266 SAFBQ15424 915 aaKnown RBP eCLIP12.78□□□□□ -0.36
CTSC-201ENST00000227266 SNRNP48Q6IEG0 339 aaKnown RBP12.78□□□□□ -0.36
CTSC-201ENST00000227266 LBX2Q6XYB7 198 aa12.78□□□□□ -0.36
CTSC-201ENST00000227266 FERMT3Q86UX7 667 aa12.78□□□□□ -0.36
CTSC-201ENST00000227266 IFNL1Q8IU54 200 aa12.78□□□□□ -0.36
CTSC-201ENST00000227266 MB21D1Q8N884 522 aa12.78□□□□□ -0.36
CTSC-201ENST00000227266 PARK7Q99497 189 aaKnown RBP12.78□□□□□ -0.36
CTSC-201ENST00000227266 PHF20Q9BVI0 1012 aa12.78□□□□□ -0.36
CTSC-201ENST00000227266 BTBD7Q9P203 1132 aa12.78□□□□□ -0.36
CTSC-201ENST00000227266 ZNF214Q9UL59 606 aaPredicted RBP12.78□□□□□ -0.36
CTSC-201ENST00000227266 TCHHQ07283 1943 aa12.78□□□□□ -0.36
CTSC-201ENST00000227266 WDR33Q9C0J8 1336 aaKnown RBP12.78□□□□□ -0.36
CTSC-201ENST00000227266 SMCO2A6NFE2 343 aa12.78□□□□□ -0.36
CTSC-201ENST00000227266 MMP1P03956 469 aa12.78□□□□□ -0.36
CTSC-201ENST00000227266 STAT3P40763 770 aa12.78□□□□□ -0.36
CTSC-201ENST00000227266 NUCB2P80303 420 aa12.78□□□□□ -0.36
CTSC-201ENST00000227266 GNL2Q13823 731 aaKnown RBP12.78□□□□□ -0.36
CTSC-201ENST00000227266 TEX13BQ9BXU2 312 aa12.78□□□□□ -0.36
CTSC-201ENST00000227266 TXNRD2Q9NNW7 524 aa12.78□□□□□ -0.36
CTSC-201ENST00000227266 RBPJLQ9UBG7 517 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms