RNA–Protein interactions for RNA: YPL120W

VPS30, Transcript of Subunit of phosphatidylinositol (PtdIns) 3-kinase complexes I and II, yeast

Gene VPS30, Length 1,674 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS30	YPL120W	FUI1	P38196	639 aa		3.57	□□□□□ -1.84
VPS30	YPL120W	OSH3	P38713	996 aa	Known RBP	3.57	□□□□□ -1.84
VPS30	YPL120W	YER186C	P40101	306 aa		3.57	□□□□□ -1.84
VPS30	YPL120W	BST1	P43571	1029 aa		3.57	□□□□□ -1.84
VPS30	YPL120W	YFL015C	P43578	164 aa		3.57	□□□□□ -1.84
VPS30	YPL120W	NOP15	P53927	220 aa	Predicted RBP	3.57	□□□□□ -1.84
VPS30	YPL120W	COG6	P53959	839 aa		3.57	□□□□□ -1.84
VPS30	YPL120W	HLR1	Q04429	423 aa		3.57	□□□□□ -1.84
VPS30	YPL120W	MYO5	Q04439	1219 aa	Known RBP	3.57	□□□□□ -1.84
VPS30	YPL120W	MCP2	Q06567	569 aa		3.57	□□□□□ -1.84
VPS30	YPL120W	ADE3	P07245	946 aa	Known RBP	3.56	□□□□□ -1.84
VPS30	YPL120W	YAP1	P19880	650 aa	Known RBP	3.56	□□□□□ -1.84
VPS30	YPL120W	RNR3	P21672	869 aa	Known RBP	3.56	□□□□□ -1.84
VPS30	YPL120W	RML2	P32611	393 aa		3.56	□□□□□ -1.84
VPS30	YPL120W	SKG6	P32900	734 aa	Predicted RBP	3.56	□□□□□ -1.84
VPS30	YPL120W	PXL1	P36166	706 aa		3.56	□□□□□ -1.84
VPS30	YPL120W	PFS1	P38872	237 aa		3.56	□□□□□ -1.84
VPS30	YPL120W	RET2	P43621	546 aa		3.56	□□□□□ -1.84
VPS30	YPL120W	RPS0B	P46654	252 aa	Known RBP	3.56	□□□□□ -1.84
VPS30	YPL120W	BIR1	P47134	954 aa		3.56	□□□□□ -1.84
VPS30	YPL120W	ALG11	P53954	548 aa	Known RBP	3.56	□□□□□ -1.84
VPS30	YPL120W	ENT2	Q05785	613 aa		3.56	□□□□□ -1.84
VPS30	YPL120W	YDL057W	Q07379	328 aa		3.56	□□□□□ -1.84
VPS30	YPL120W	RPN8	Q08723	338 aa	Known RBP	3.56	□□□□□ -1.84
VPS30	YPL120W	CRC1	Q12289	327 aa		3.56	□□□□□ -1.84
VPS30	YPL120W	HIS4	P00815	799 aa	Known RBP	3.55	□□□□□ -1.84
VPS30	YPL120W	COX4	P04037	155 aa		3.55	□□□□□ -1.84
VPS30	YPL120W	GAL80	P04387	435 aa		3.55	□□□□□ -1.84
VPS30	YPL120W	MSF1	P08425	469 aa		3.55	□□□□□ -1.84
VPS30	YPL120W	YBR071W	P38243	211 aa		3.55	□□□□□ -1.84
VPS30	YPL120W	MGS1	P40151	587 aa		3.55	□□□□□ -1.84
VPS30	YPL120W	TIF34	P40217	347 aa	Known RBP	3.55	□□□□□ -1.84
VPS30	YPL120W	GPP1	P41277	250 aa	Known RBP	3.55	□□□□□ -1.84
VPS30	YPL120W	FYV8	P46949	817 aa	Known RBP	3.55	□□□□□ -1.84
VPS30	YPL120W	PEX14	P53112	341 aa		3.55	□□□□□ -1.84
VPS30	YPL120W	MLC1	P53141	149 aa		3.55	□□□□□ -1.84
VPS30	YPL120W	HER2	Q03557	464 aa		3.55	□□□□□ -1.84
VPS30	YPL120W	MTQ2	Q03920	221 aa	Predicted RBP	3.55	□□□□□ -1.84
VPS30	YPL120W	NEW1	Q08972	1196 aa	Known RBP	3.55	□□□□□ -1.84
VPS30	YPL120W	RDL1	Q12305	139 aa	Known RBP	3.55	□□□□□ -1.84
VPS30	YPL120W	RPL4A	P10664	362 aa	Known RBP	3.55	□□□□□ -1.84
VPS30	YPL120W	TRX2	P22803	104 aa	Known RBP	3.55	□□□□□ -1.84
VPS30	YPL120W	GSY2	P27472	705 aa		3.55	□□□□□ -1.84
VPS30	YPL120W	GCD7	P32502	381 aa	Predicted RBP	3.55	□□□□□ -1.84
VPS30	YPL120W	VPS24	P36095	224 aa	Known RBP	3.55	□□□□□ -1.84
VPS30	YPL120W	ERG10	P41338	398 aa	Known RBP	3.55	□□□□□ -1.84
VPS30	YPL120W	VTC2	P43585	828 aa		3.55	□□□□□ -1.84
VPS30	YPL120W	COQ5	P49017	307 aa		3.55	□□□□□ -1.84
VPS30	YPL120W	RPL4B	P49626	362 aa	Known RBP	3.55	□□□□□ -1.84
VPS30	YPL120W	YNL092W	P53934	400 aa		3.55	□□□□□ -1.84
VPS30	YPL120W	TOF2	Q02208	771 aa		3.55	□□□□□ -1.84
VPS30	YPL120W	BNA5	Q05979	453 aa		3.55	□□□□□ -1.84
VPS30	YPL120W	TRE2	Q08693	809 aa		3.55	□□□□□ -1.84
VPS30	YPL120W	AIM41	Q12032	185 aa		3.55	□□□□□ -1.84
VPS30	YPL120W	RAD3	P06839	778 aa		3.54	□□□□□ -1.84
VPS30	YPL120W	HOP1	P20050	605 aa		3.54	□□□□□ -1.84
VPS30	YPL120W	CAP1	P28495	268 aa	Known RBP	3.54	□□□□□ -1.84
VPS30	YPL120W	EBP2	P36049	427 aa	Known RBP	3.54	□□□□□ -1.84
VPS30	YPL120W	CDS1	P38221	457 aa		3.54	□□□□□ -1.84
VPS30	YPL120W	YIL161W	P40449	235 aa	Known RBP	3.54	□□□□□ -1.84
VPS30	YPL120W	PRM2	P40534	656 aa		3.54	□□□□□ -1.84
VPS30	YPL120W	GPD2	P41911	440 aa	Known RBP	3.54	□□□□□ -1.84
VPS30	YPL120W	SAP4	P53036	818 aa		3.54	□□□□□ -1.84
VPS30	YPL120W	MNP1	P53163	194 aa	Predicted RBP	3.54	□□□□□ -1.84
VPS30	YPL120W	LSC1	P53598	329 aa	Known RBP	3.54	□□□□□ -1.84
VPS30	YPL120W	TGL2	P54857	326 aa		3.54	□□□□□ -1.84
VPS30	YPL120W	WAR1	Q03631	944 aa		3.54	□□□□□ -1.84
VPS30	YPL120W	YPR089W	O13585	888 aa		3.53	□□□□□ -1.84
VPS30	YPL120W	MAK31	P23059	88 aa		3.53	□□□□□ -1.84
VPS30	YPL120W	BEM1	P29366	551 aa		3.53	□□□□□ -1.84
VPS30	YPL120W	PLC1	P32383	869 aa		3.53	□□□□□ -1.84
VPS30	YPL120W	PRP19	P32523	503 aa	Known RBP	3.53	□□□□□ -1.84
VPS30	YPL120W	MRPL40	P36534	297 aa		3.53	□□□□□ -1.84
VPS30	YPL120W	AIM23	P47015	356 aa		3.53	□□□□□ -1.84
VPS30	YPL120W	YJR096W	P47137	282 aa		3.53	□□□□□ -1.84
VPS30	YPL120W	SWS2	P53937	143 aa		3.53	□□□□□ -1.84
VPS30	YPL120W	YDL121C	Q07541	149 aa		3.53	□□□□□ -1.84
VPS30	YPL120W	HRT3	Q12347	344 aa		3.53	□□□□□ -1.84
VPS30	YPL120W	RKM5	Q12367	367 aa		3.53	□□□□□ -1.84
VPS30	YPL120W	YLR111W	Q12528	110 aa		3.53	□□□□□ -1.84
VPS30	YPL120W	YMR085W	P0CF18	432 aa		3.52	□□□□□ -1.85
VPS30	YPL120W	VPS3	P23643	1011 aa		3.52	□□□□□ -1.85
VPS30	YPL120W	PIM1	P36775	1133 aa		3.52	□□□□□ -1.85
VPS30	YPL120W	ATG12	P38316	186 aa		3.52	□□□□□ -1.85
VPS30	YPL120W	CKB2	P38930	258 aa		3.52	□□□□□ -1.85
VPS30	YPL120W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	3.52	□□□□□ -1.85	not detected
VPS30	YPL120W	FIS1	P40515	155 aa		3.52	□□□□□ -1.85
VPS30	YPL120W	POL31	P46957	487 aa		3.52	□□□□□ -1.85
VPS30	YPL120W	ASE1	P50275	885 aa		3.52	□□□□□ -1.85
VPS30	YPL120W	CWC22	P53333	577 aa	Known RBP	3.52	□□□□□ -1.85
VPS30	YPL120W	TPO3	Q06451	622 aa		3.52	□□□□□ -1.85
VPS30	YPL120W	HER1	Q12276	1246 aa		3.52	□□□□□ -1.85
VPS30	YPL120W	DYN1	P36022	4092 aa		3.52	□□□□□ -1.85
VPS30	YPL120W	OPI1	P21957	404 aa		3.52	□□□□□ -1.85
VPS30	YPL120W	SEC65	P29478	273 aa		3.52	□□□□□ -1.85
VPS30	YPL120W	EHT1	P38295	451 aa		3.52	□□□□□ -1.85
VPS30	YPL120W	YHR033W	P38690	423 aa		3.52	□□□□□ -1.85
VPS30	YPL120W	FLC3	P53121	802 aa		3.52	□□□□□ -1.85
VPS30	YPL120W	YPL071C	Q02864	156 aa		3.52	□□□□□ -1.85
VPS30	YPL120W	TRM82	Q03774	444 aa		3.52	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 48.3 ms