RNA–Protein interactions for RNA: YPL092W

SSU1, Transcript of Plasma membrane sulfite pump involved in sulfite metabolism, yeast

Gene SSU1, Length 1,377 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSU1	YPL092W	CFT2	Q12102	859 aa	Predicted RBP	4.27	□□□□□ -1.73
SSU1	YPL092W	LCB4	Q12246	624 aa		4.27	□□□□□ -1.73
SSU1	YPL092W	YOL114C	Q12322	202 aa		4.27	□□□□□ -1.73
SSU1	YPL092W	VMA2	P16140	517 aa	Known RBP	4.26	□□□□□ -1.73
SSU1	YPL092W	ROX1	P25042	368 aa		4.26	□□□□□ -1.73
SSU1	YPL092W	ATO2	P32907	282 aa		4.26	□□□□□ -1.73
SSU1	YPL092W	ERG7	P38604	731 aa		4.26	□□□□□ -1.73
SSU1	YPL092W	STT3	P39007	718 aa	Known RBP	4.26	□□□□□ -1.73
SSU1	YPL092W	MDV1	P47025	714 aa		4.26	□□□□□ -1.73
SSU1	YPL092W	YGL039W	P53183	348 aa	Known RBP	4.26	□□□□□ -1.73
SSU1	YPL092W	RET3	P53600	189 aa		4.26	□□□□□ -1.73
SSU1	YPL092W	EAF7	P53911	425 aa	Known RBP	4.26	□□□□□ -1.73
SSU1	YPL092W	AIM33	Q04516	312 aa		4.26	□□□□□ -1.73
SSU1	YPL092W	SPH1	Q06160	661 aa		4.26	□□□□□ -1.73
SSU1	YPL092W	YDL242W	Q07746	117 aa		4.26	□□□□□ -1.73
SSU1	YPL092W	SRL1	Q08673	210 aa		4.26	□□□□□ -1.73
SSU1	YPL092W	LYS21	Q12122	440 aa	Known RBP	4.26	□□□□□ -1.73
SSU1	YPL092W	RRP6	Q12149	733 aa	Known RBP	4.26	□□□□□ -1.73
SSU1	YPL092W	CEX1	Q12453	761 aa		4.26	□□□□□ -1.73
SSU1	YPL092W	ARP6	Q12509	438 aa		4.26	□□□□□ -1.73
SSU1	YPL092W	Q0010	Q9ZZX9	128 aa		4.26	□□□□□ -1.73
SSU1	YPL092W	ADH4	P10127	382 aa		4.25	□□□□□ -1.73
SSU1	YPL092W	THR4	P16120	514 aa	Known RBP	4.25	□□□□□ -1.73
SSU1	YPL092W	PWP2	P25635	923 aa	Known RBP	4.25	□□□□□ -1.73
SSU1	YPL092W	CDC60	P26637	1090 aa	Known RBP	4.25	□□□□□ -1.73
SSU1	YPL092W	UBP11	P36026	717 aa		4.25	□□□□□ -1.73
SSU1	YPL092W	GAA1	P39012	614 aa		4.25	□□□□□ -1.73
SSU1	YPL092W	LYS20	P48570	428 aa	Known RBP	4.25	□□□□□ -1.73
SSU1	YPL092W	LIF1	P53150	421 aa		4.25	□□□□□ -1.73
SSU1	YPL092W	BNI5	P53890	448 aa	Known RBP	4.25	□□□□□ -1.73
SSU1	YPL092W	VMS1	Q04311	632 aa	Known RBP	4.25	□□□□□ -1.73
SSU1	YPL092W	YML053C	Q04978	212 aa		4.25	□□□□□ -1.73
SSU1	YPL092W	RAD34	Q06665	692 aa		4.25	□□□□□ -1.73
SSU1	YPL092W	ATX2	Q12067	313 aa		4.25	□□□□□ -1.73
SSU1	YPL092W	DBP10	Q12389	995 aa	Known RBP	4.25	□□□□□ -1.73
SSU1	YPL092W	ERP3	Q12403	225 aa		4.25	□□□□□ -1.73
SSU1	YPL092W	NBL1	Q3E7Y6	73 aa		4.25	□□□□□ -1.73
SSU1	YPL092W	YER175W-A	Q8TGU4	54 aa		4.25	□□□□□ -1.73
SSU1	YPL092W	DDP1	Q99321	188 aa	Known RBP	4.25	□□□□□ -1.73
SSU1	YPL092W	FKS1	P38631	1876 aa	Known RBP	4.24	□□□□□ -1.73
SSU1	YPL092W	GPA1	P08539	472 aa		4.24	□□□□□ -1.73
SSU1	YPL092W	ALG1	P16661	449 aa		4.24	□□□□□ -1.73
SSU1	YPL092W	MCR1	P36060	302 aa	Known RBP	4.24	□□□□□ -1.73
SSU1	YPL092W	SCO2	P38072	301 aa		4.24	□□□□□ -1.73
SSU1	YPL092W	RFT1	P38206	574 aa	Predicted RBP	4.24	□□□□□ -1.73
SSU1	YPL092W	YHL041W	P38730	149 aa		4.24	□□□□□ -1.73
SSU1	YPL092W	YER130C	P39959	443 aa		4.24	□□□□□ -1.73
SSU1	YPL092W	QRI7	P43122	407 aa		4.24	□□□□□ -1.73
SSU1	YPL092W	PUS4	P48567	403 aa	Known RBP	4.24	□□□□□ -1.73
SSU1	YPL092W	CUE3	P53137	624 aa	Known RBP	4.24	□□□□□ -1.73
SSU1	YPL092W	BOP3	P53958	396 aa		4.24	□□□□□ -1.73
SSU1	YPL092W	UBX4	P54730	416 aa		4.24	□□□□□ -1.73
SSU1	YPL092W	SLD5	Q03406	294 aa		4.24	□□□□□ -1.73
SSU1	YPL092W	CSM3	Q04659	317 aa		4.24	□□□□□ -1.73
SSU1	YPL092W	MMR1	Q06324	491 aa		4.24	□□□□□ -1.73
SSU1	YPL092W	TIP41	Q12199	356 aa		4.24	□□□□□ -1.73
SSU1	YPL092W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
SSU1	YPL092W	ARP7	Q12406	477 aa		4.24	□□□□□ -1.73
SSU1	YPL092W	ECM29	P38737	1868 aa		4.24	□□□□□ -1.73
SSU1	YPL092W	ILV1	P00927	576 aa	Known RBP	4.23	□□□□□ -1.73
SSU1	YPL092W	MSS18	P08593	268 aa		4.23	□□□□□ -1.73
SSU1	YPL092W	KGD2	P19262	463 aa	Predicted RBP	4.23	□□□□□ -1.73
SSU1	YPL092W	MCM3	P24279	971 aa	Known RBP	4.23	□□□□□ -1.73
SSU1	YPL092W	YCR061W	P25639	631 aa		4.23	□□□□□ -1.73
SSU1	YPL092W	RPN12	P32496	274 aa		4.23	□□□□□ -1.73
SSU1	YPL092W	SAS3	P34218	831 aa		4.23	□□□□□ -1.73
SSU1	YPL092W	REG2	P38232	338 aa		4.23	□□□□□ -1.73
SSU1	YPL092W	NPR3	P38742	1146 aa		4.23	□□□□□ -1.73
SSU1	YPL092W	SWD1	P39706	426 aa		4.23	□□□□□ -1.73
SSU1	YPL092W	YPT11	P48559	417 aa		4.23	□□□□□ -1.73
SSU1	YPL092W	TEP1	P53916	434 aa		4.23	□□□□□ -1.73
SSU1	YPL092W	VTC3	Q02725	835 aa		4.23	□□□□□ -1.73
SSU1	YPL092W	PSR2	Q07949	397 aa		4.23	□□□□□ -1.73
SSU1	YPL092W	UBX3	Q12229	455 aa		4.23	□□□□□ -1.73
SSU1	YPL092W	YPT1	P01123	206 aa	Known RBP	4.22	□□□□□ -1.73
SSU1	YPL092W	GAL4	P04386	881 aa		4.22	□□□□□ -1.73
SSU1	YPL092W	TKL1	P23254	680 aa	Known RBP	4.22	□□□□□ -1.73
SSU1	YPL092W	CDC15	P27636	974 aa		4.22	□□□□□ -1.73
SSU1	YPL092W	BMH1	P29311	267 aa	Known RBP	4.22	□□□□□ -1.73
SSU1	YPL092W	DBP7	P36120	742 aa	Known RBP	4.22	□□□□□ -1.73
SSU1	YPL092W	ARO9	P38840	513 aa	Predicted RBP	4.22	□□□□□ -1.73
SSU1	YPL092W	VFA1	P40080	203 aa		4.22	□□□□□ -1.73
SSU1	YPL092W	RSM25	P40496	264 aa		4.22	□□□□□ -1.73
SSU1	YPL092W	IMA5	P40884	581 aa		4.22	□□□□□ -1.73
SSU1	YPL092W	MAD3	P47074	515 aa		4.22	□□□□□ -1.73
SSU1	YPL092W	RTC4	P53850	401 aa		4.22	□□□□□ -1.73
SSU1	YPL092W	SUB1	P54000	292 aa	Known RBP	4.22	□□□□□ -1.73
SSU1	YPL092W	MOT3	P54785	490 aa	Known RBP	4.22	□□□□□ -1.73
SSU1	YPL092W	YMR321C	Q04898	105 aa		4.22	□□□□□ -1.73
SSU1	YPL092W	HIS4	P00815	799 aa	Known RBP	4.21	□□□□□ -1.74
SSU1	YPL092W	ISY1	P21374	235 aa	Predicted RBP	4.21	□□□□□ -1.74
SSU1	YPL092W	PRE2	P30656	287 aa	Known RBP	4.21	□□□□□ -1.74
SSU1	YPL092W	YAT2	P40017	923 aa		4.21	□□□□□ -1.74
SSU1	YPL092W	GPD2	P41911	440 aa	Known RBP	4.21	□□□□□ -1.74
SSU1	YPL092W	RSC1	P53236	928 aa		4.21	□□□□□ -1.74
SSU1	YPL092W	CBK1	P53894	756 aa		4.21	□□□□□ -1.74
SSU1	YPL092W	PGA2	P53903	129 aa		4.21	□□□□□ -1.74
SSU1	YPL092W	YAT1	P80235	687 aa		4.21	□□□□□ -1.74
SSU1	YPL092W	TRI1	Q05024	226 aa		4.21	□□□□□ -1.74
SSU1	YPL092W	PFA4	Q12006	378 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms