RNA–Protein interactions for RNA: YOR069W

VPS5, Transcript of Nexin-1 homolog, yeastyeast

Gene VPS5, Length 2,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS5YOR069W GPB2P39717 880 aa5.91□□□□□ -1.46
VPS5YOR069W RPT2P40327 437 aaKnown RBP5.91□□□□□ -1.46
VPS5YOR069W IML2P47031 731 aa5.91□□□□□ -1.46
VPS5YOR069W MND1P53102 219 aa5.91□□□□□ -1.46
VPS5YOR069W YNL146WP53906 100 aa5.91□□□□□ -1.46
VPS5YOR069W SLM2P53955 656 aa5.91□□□□□ -1.46
VPS5YOR069W SPR6Q01684 191 aa5.91□□□□□ -1.46
VPS5YOR069W ENA2Q01896 1091 aa5.91□□□□□ -1.46
VPS5YOR069W YPL107WQ02873 248 aa5.91□□□□□ -1.46
VPS5YOR069W HPT1Q04178 221 aaKnown RBP5.91□□□□□ -1.46
VPS5YOR069W EMG1Q06287 252 aaKnown RBP5.91□□□□□ -1.46
VPS5YOR069W FMP25Q08023 583 aa5.91□□□□□ -1.46
VPS5YOR069W SAM4Q08985 325 aaKnown RBP5.91□□□□□ -1.46
VPS5YOR069W RRG1Q12167 365 aaPredicted RBP5.91□□□□□ -1.46
VPS5YOR069W HOS1Q12214 470 aa5.91□□□□□ -1.46
VPS5YOR069W ATG34Q12292 412 aa5.91□□□□□ -1.46
VPS5YOR069W RTR2Q12378 196 aa5.91□□□□□ -1.46
VPS5YOR069W GTT2Q12390 233 aa5.91□□□□□ -1.46
VPS5YOR069W PFK27Q12471 397 aaPredicted RBP5.91□□□□□ -1.46
VPS5YOR069W FMP16Q12497 93 aa5.91□□□□□ -1.46
VPS5YOR069W ENA5Q12691 1091 aa5.91□□□□□ -1.46
VPS5YOR069W YOL159C-AQ3E769 90 aa5.91□□□□□ -1.46
VPS5YOR069W SUC2P00724 532 aa5.9□□□□□ -1.47
VPS5YOR069W GAL10P04397 699 aa5.9□□□□□ -1.47
VPS5YOR069W DED1P06634 604 aaKnown RBP5.9□□□□□ -1.47
VPS5YOR069W ADE5,7P07244 802 aaKnown RBP5.9□□□□□ -1.47
VPS5YOR069W WHI2P12611 486 aa5.9□□□□□ -1.47
VPS5YOR069W GIT1P25346 518 aa5.9□□□□□ -1.47
VPS5YOR069W PUP3P25451 205 aaKnown RBP5.9□□□□□ -1.47
VPS5YOR069W PHO91P27514 894 aa5.9□□□□□ -1.47
VPS5YOR069W IMP3P32899 183 aaPredicted RBP5.9□□□□□ -1.47
VPS5YOR069W NIC96P34077 839 aa5.9□□□□□ -1.47
VPS5YOR069W IPT1P38954 527 aa5.9□□□□□ -1.47
VPS5YOR069W YGR210CP42942 411 aa5.9□□□□□ -1.47
VPS5YOR069W CNN1P43618 361 aa5.9□□□□□ -1.47
VPS5YOR069W YJL132WP47014 750 aa5.9□□□□□ -1.47
VPS5YOR069W SNX4P47057 423 aa5.9□□□□□ -1.47
VPS5YOR069W DBP6P53734 629 aaKnown RBP5.9□□□□□ -1.47
VPS5YOR069W SVL3Q03088 825 aaKnown RBP5.9□□□□□ -1.47
VPS5YOR069W SNU56Q03782 492 aaKnown RBP5.9□□□□□ -1.47
VPS5YOR069W YLR455WQ06188 304 aa5.9□□□□□ -1.47
VPS5YOR069W GPI11Q06636 219 aa5.9□□□□□ -1.47
VPS5YOR069W SAS5Q99314 248 aa5.9□□□□□ -1.47
VPS5YOR069W THP2O13539 261 aaKnown RBP5.89□□□□□ -1.47
VPS5YOR069W HMG1P12683 1054 aa5.89□□□□□ -1.47
VPS5YOR069W YPK1P12688 680 aaKnown RBP5.89□□□□□ -1.47
VPS5YOR069W HSP26P15992 214 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
VPS5YOR069W RPL24BP24000 155 aaKnown RBP5.89□□□□□ -1.47
VPS5YOR069W PMI40P29952 429 aaKnown RBP5.89□□□□□ -1.47
VPS5YOR069W NTG1P31378 399 aa5.89□□□□□ -1.47
VPS5YOR069W MNN2P38069 597 aa5.89□□□□□ -1.47
VPS5YOR069W IFA38P38286 347 aa5.89□□□□□ -1.47
VPS5YOR069W GIP4P39732 760 aa5.89□□□□□ -1.47
VPS5YOR069W FIR1P40020 876 aa5.89□□□□□ -1.47
VPS5YOR069W COS4P43542 379 aa5.89□□□□□ -1.47
VPS5YOR069W KEL2P50090 882 aa5.89□□□□□ -1.47
VPS5YOR069W RRT6P53117 311 aaPredicted RBP5.89□□□□□ -1.47
VPS5YOR069W YGR053CP53234 283 aa5.89□□□□□ -1.47
VPS5YOR069W YGR127WP53275 312 aa5.89□□□□□ -1.47
VPS5YOR069W YGR283CP53336 341 aaPredicted RBP5.89□□□□□ -1.47
VPS5YOR069W UGO1Q03327 502 aa5.89□□□□□ -1.47
VPS5YOR069W PPN1Q04119 674 aa5.89□□□□□ -1.47
VPS5YOR069W NRT1Q08485 598 aa5.89□□□□□ -1.47
VPS5YOR069W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
VPS5YOR069W SMF3Q12078 473 aaPredicted RBP5.89□□□□□ -1.47
VPS5YOR069W YDL109CQ12103 647 aa5.89□□□□□ -1.47
VPS5YOR069W TRM10Q12400 293 aa5.89□□□□□ -1.47
VPS5YOR069W ATG31Q12421 196 aa5.89□□□□□ -1.47
VPS5YOR069W NSI1Q12457 570 aa5.89□□□□□ -1.47
VPS5YOR069W ARG3P05150 338 aa5.89□□□□□ -1.47
VPS5YOR069W SAM1P10659 382 aaKnown RBP5.89□□□□□ -1.47
VPS5YOR069W INO1P11986 533 aa5.89□□□□□ -1.47
VPS5YOR069W CHA1P25379 360 aaKnown RBP5.89□□□□□ -1.47
VPS5YOR069W FUN30P31380 1131 aa5.89□□□□□ -1.47
VPS5YOR069W PPQ1P32945 549 aa5.89□□□□□ -1.47
VPS5YOR069W GLY1P37303 387 aaKnown RBP5.89□□□□□ -1.47
VPS5YOR069W YMC2P38087 329 aa5.89□□□□□ -1.47
VPS5YOR069W GPX2P38143 162 aa5.89□□□□□ -1.47
VPS5YOR069W ARN2P38724 620 aa5.89□□□□□ -1.47
VPS5YOR069W YHK8P38776 514 aa5.89□□□□□ -1.47
VPS5YOR069W IPI1P38803 334 aaPredicted RBP5.89□□□□□ -1.47
VPS5YOR069W AIM18P38884 321 aa5.89□□□□□ -1.47
VPS5YOR069W LYS9P38999 446 aa5.89□□□□□ -1.47
VPS5YOR069W FHL1P39521 936 aa5.89□□□□□ -1.47
VPS5YOR069W SOP4P39543 234 aaPredicted RBP5.89□□□□□ -1.47
VPS5YOR069W MIT1P40002 666 aa5.89□□□□□ -1.47
VPS5YOR069W MAF1P41910 395 aa5.89□□□□□ -1.47
VPS5YOR069W RRT5P43607 289 aa5.89□□□□□ -1.47
VPS5YOR069W STB4P50104 949 aa5.89□□□□□ -1.47
VPS5YOR069W CUL3P53202 744 aa5.89□□□□□ -1.47
VPS5YOR069W SNF12P53628 566 aa5.89□□□□□ -1.47
VPS5YOR069W ZRG17P53735 605 aa5.89□□□□□ -1.47
VPS5YOR069W DID2P69771 204 aa5.89□□□□□ -1.47
VPS5YOR069W BCH1Q05029 724 aa5.89□□□□□ -1.47
VPS5YOR069W YPS7Q06325 596 aa5.89□□□□□ -1.47
VPS5YOR069W SHS1Q07657 551 aa5.89□□□□□ -1.47
VPS5YOR069W ISA1Q07821 250 aaPredicted RBP5.89□□□□□ -1.47
VPS5YOR069W SLD7Q08457 257 aa5.89□□□□□ -1.47
VPS5YOR069W SLF1Q12034 447 aaKnown RBP5.89□□□□□ -1.47
VPS5YOR069W HUA2Q12134 243 aa5.89□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 26 ms