RNA–Protein interactions for RNA: YMR231W

PEP5, Transcript of Histone E3 ligase, component of CORVET membrane tethering complex, yeastyeast

Gene PEP5, Length 3,090 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP5YMR231W PEA2P40091 420 aa4.3□□□□□ -1.72
PEP5YMR231W PRE6P40303 254 aaKnown RBP4.3□□□□□ -1.72
PEP5YMR231W AYR1P40471 297 aa4.3□□□□□ -1.72
PEP5YMR231W RPL34BP40525 121 aaKnown RBP4.3□□□□□ -1.72
PEP5YMR231W GND2P53319 492 aa4.3□□□□□ -1.72
PEP5YMR231W MUK1Q02866 612 aa4.3□□□□□ -1.72
PEP5YMR231W YML131WQ03102 365 aa4.3□□□□□ -1.72
PEP5YMR231W RSC9Q03124 581 aa4.3□□□□□ -1.72
PEP5YMR231W CEF1Q03654 590 aaPredicted RBP4.3□□□□□ -1.72
PEP5YMR231W RGC1Q06108 1083 aaKnown RBP4.3□□□□□ -1.72
PEP5YMR231W NOP12Q08208 459 aaKnown RBP4.3□□□□□ -1.72
PEP5YMR231W ULA1Q12059 462 aa4.3□□□□□ -1.72
PEP5YMR231W LDB19Q12502 818 aa4.3□□□□□ -1.72
PEP5YMR231W SPE1P08432 466 aa4.3□□□□□ -1.72
PEP5YMR231W YSP3P25036 478 aa4.3□□□□□ -1.72
PEP5YMR231W RVS161P25343 265 aaKnown RBP4.3□□□□□ -1.72
PEP5YMR231W YBR225WP38321 900 aa4.3□□□□□ -1.72
PEP5YMR231W PRM9P39551 298 aa4.3□□□□□ -1.72
PEP5YMR231W RBG1P39729 369 aa4.3□□□□□ -1.72
PEP5YMR231W FET5P43561 622 aa4.3□□□□□ -1.72
PEP5YMR231W RRT5P43607 289 aa4.3□□□□□ -1.72
PEP5YMR231W AVT1P47082 602 aa4.3□□□□□ -1.72
PEP5YMR231W GCV2P49095 1034 aa4.3□□□□□ -1.72
PEP5YMR231W NHX1Q04121 633 aa4.3□□□□□ -1.72
PEP5YMR231W SYT1Q06836 1226 aa4.3□□□□□ -1.72
PEP5YMR231W MFG1Q07684 458 aa4.3□□□□□ -1.72
PEP5YMR231W LDB17Q12342 491 aa4.3□□□□□ -1.72
PEP5YMR231W PNS1Q12412 539 aa4.3□□□□□ -1.72
PEP5YMR231W AI3P03877 415 aa4.3□□□□□ -1.72
PEP5YMR231W SPT3P06844 337 aa4.3□□□□□ -1.72
PEP5YMR231W MIS1P09440 975 aaKnown RBP4.3□□□□□ -1.72
PEP5YMR231W RSR1P13856 272 aa4.3□□□□□ -1.72
PEP5YMR231W VBA3P25594 458 aa4.3□□□□□ -1.72
PEP5YMR231W YCR016WP25617 290 aaKnown RBP4.3□□□□□ -1.72
PEP5YMR231W STE14P32584 239 aa4.3□□□□□ -1.72
PEP5YMR231W RGT1P32862 1170 aa4.3□□□□□ -1.72
PEP5YMR231W SMY2P32909 740 aaKnown RBP4.3□□□□□ -1.72
PEP5YMR231W VBA5P36172 582 aa4.3□□□□□ -1.72
PEP5YMR231W ELO3P40319 345 aa4.3□□□□□ -1.72
PEP5YMR231W GTR2P53290 341 aa4.3□□□□□ -1.72
PEP5YMR231W ASR1Q06834 288 aa4.3□□□□□ -1.72
PEP5YMR231W BAG7Q12128 409 aa4.3□□□□□ -1.72
PEP5YMR231W BBP1Q12365 385 aa4.3□□□□□ -1.72
PEP5YMR231W CDC19P00549 500 aaKnown RBP4.29□□□□□ -1.72
PEP5YMR231W ADE4P04046 510 aaKnown RBP4.29□□□□□ -1.72
PEP5YMR231W TKL1P23254 680 aaKnown RBP4.29□□□□□ -1.72
PEP5YMR231W GUT2P32191 649 aa4.29□□□□□ -1.72
PEP5YMR231W GLC3P32775 704 aa4.29□□□□□ -1.72
PEP5YMR231W NAT2P37293 288 aa4.29□□□□□ -1.72
PEP5YMR231W APN2P38207 520 aa4.29□□□□□ -1.72
PEP5YMR231W RAD55P38953 406 aa4.29□□□□□ -1.72
PEP5YMR231W YGR283CP53336 341 aaPredicted RBP4.29□□□□□ -1.72
PEP5YMR231W ISU1Q03020 165 aa4.29□□□□□ -1.72
PEP5YMR231W RSM28Q03430 361 aa4.29□□□□□ -1.72
PEP5YMR231W MGR3Q04472 501 aa4.29□□□□□ -1.72
PEP5YMR231W YDR124WQ04608 324 aa4.29□□□□□ -1.72
PEP5YMR231W BLS1Q06071 122 aa4.29□□□□□ -1.72
PEP5YMR231W YLR446WQ06204 433 aa4.29□□□□□ -1.72
PEP5YMR231W HSP42Q12329 375 aa4.29□□□□□ -1.72
PEP5YMR231W NOP56Q12460 504 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
PEP5YMR231W PFK27Q12471 397 aaPredicted RBP4.29□□□□□ -1.72
PEP5YMR231W COX4P04037 155 aa4.29□□□□□ -1.72
PEP5YMR231W RPL6BP05739 176 aaKnown RBP4.29□□□□□ -1.72
PEP5YMR231W CDC31P06704 161 aaKnown RBP4.29□□□□□ -1.72
PEP5YMR231W CHS1P08004 1131 aa4.29□□□□□ -1.72
PEP5YMR231W COS2P0CX12 379 aa4.29□□□□□ -1.72
PEP5YMR231W COS3P0CX13 379 aa4.29□□□□□ -1.72
PEP5YMR231W MAS1P10507 462 aa4.29□□□□□ -1.72
PEP5YMR231W GAL3P13045 520 aa4.29□□□□□ -1.72
PEP5YMR231W MET8P15807 274 aa4.29□□□□□ -1.72
PEP5YMR231W GLN3P18494 730 aa4.29□□□□□ -1.72
PEP5YMR231W SEC15P22224 910 aa4.29□□□□□ -1.72
PEP5YMR231W YJU2P28320 278 aaPredicted RBP4.29□□□□□ -1.72
PEP5YMR231W PEX2P32800 271 aa4.29□□□□□ -1.72
PEP5YMR231W PCS60P38137 543 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
PEP5YMR231W RCK1P38622 512 aa4.29□□□□□ -1.72
PEP5YMR231W NIT1P40447 199 aa4.29□□□□□ -1.72
PEP5YMR231W PAC11P40960 533 aa4.29□□□□□ -1.72
PEP5YMR231W ATG36P46983 293 aa4.29□□□□□ -1.72
PEP5YMR231W TY4A-JP47023 414 aa4.29□□□□□ -1.72
PEP5YMR231W STR3P53101 465 aaKnown RBP4.29□□□□□ -1.72
PEP5YMR231W NMA111P53920 997 aa4.29□□□□□ -1.72
PEP5YMR231W REX2P54964 269 aaKnown RBP4.29□□□□□ -1.72
PEP5YMR231W SKI8Q02793 397 aaPredicted RBP4.29□□□□□ -1.72
PEP5YMR231W YDR131CQ03899 556 aa4.29□□□□□ -1.72
PEP5YMR231W NUT2Q06213 157 aa4.29□□□□□ -1.72
PEP5YMR231W REH1Q06709 432 aa4.29□□□□□ -1.72
PEP5YMR231W MDM36Q06820 579 aa4.29□□□□□ -1.72
PEP5YMR231W SMF3Q12078 473 aaPredicted RBP4.29□□□□□ -1.72
PEP5YMR231W MNL2Q12205 849 aa4.29□□□□□ -1.72
PEP5YMR231W YDR061WQ12298 539 aa4.29□□□□□ -1.72
PEP5YMR231W HSP26P15992 214 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72not detected
PEP5YMR231W CAD1P24813 409 aaKnown RBP4.28□□□□□ -1.72
PEP5YMR231W NUP2P32499 720 aa4.28□□□□□ -1.72
PEP5YMR231W YKL063CP35725 167 aa4.28□□□□□ -1.72
PEP5YMR231W IFA38P38286 347 aa4.28□□□□□ -1.72
PEP5YMR231W ARN2P38724 620 aa4.28□□□□□ -1.72
PEP5YMR231W ACA1P39970 489 aa4.28□□□□□ -1.72
PEP5YMR231W PCL6P40038 420 aa4.28□□□□□ -1.72
PEP5YMR231W YFL012WP43580 148 aa4.28□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms