RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C YLR302CO13544 120 aa3.52□□□□□ -1.85
VPS33YLR396C URE2P23202 354 aaKnown RBP3.52□□□□□ -1.85
VPS33YLR396C MRP20P32387 263 aa3.52□□□□□ -1.85
VPS33YLR396C SWP82P43554 623 aa3.52□□□□□ -1.85
VPS33YLR396C IRC7P43623 340 aa3.52□□□□□ -1.85
VPS33YLR396C CBK1P53894 756 aa3.52□□□□□ -1.85
VPS33YLR396C RSC9Q03124 581 aa3.52□□□□□ -1.85
VPS33YLR396C HOT1Q03213 719 aa3.52□□□□□ -1.85
VPS33YLR396C ERV41Q04651 352 aa3.52□□□□□ -1.85
VPS33YLR396C RCO1Q04779 684 aa3.52□□□□□ -1.85
VPS33YLR396C CRN1Q06440 651 aa3.52□□□□□ -1.85
VPS33YLR396C RLP24Q07915 199 aaKnown RBP3.52□□□□□ -1.85
VPS33YLR396C PSK2Q08217 1101 aa3.52□□□□□ -1.85
VPS33YLR396C CTI6Q08923 506 aa3.52□□□□□ -1.85
VPS33YLR396C DUR1,2P32528 1835 aaKnown RBP3.52□□□□□ -1.85
VPS33YLR396C DPH5P32469 300 aaPredicted RBP3.51□□□□□ -1.85
VPS33YLR396C ZUO1P32527 433 aaKnown RBP3.51□□□□□ -1.85
VPS33YLR396C TFC3P34111 1160 aa3.51□□□□□ -1.85
VPS33YLR396C FMP10P40098 244 aa3.51□□□□□ -1.85
VPS33YLR396C DPH1P40487 425 aaKnown RBP3.51□□□□□ -1.85
VPS33YLR396C SNO3P43544 222 aa3.51□□□□□ -1.85
VPS33YLR396C PXR1P53335 271 aaPredicted RBP3.51□□□□□ -1.85
VPS33YLR396C IDP3P53982 420 aaKnown RBP3.51□□□□□ -1.85
VPS33YLR396C GET3Q12154 354 aaKnown RBP3.51□□□□□ -1.85
VPS33YLR396C NKP1Q12493 238 aa3.51□□□□□ -1.85
VPS33YLR396C ILS1P09436 1072 aaKnown RBP3.51□□□□□ -1.85
VPS33YLR396C FRS2P15625 503 aaKnown RBP3.51□□□□□ -1.85
VPS33YLR396C SEC14P24280 304 aaKnown RBP3.51□□□□□ -1.85
VPS33YLR396C NTR2P36118 322 aaPredicted RBP3.51□□□□□ -1.85
VPS33YLR396C AAP1P37898 856 aaKnown RBP3.51□□□□□ -1.85
VPS33YLR396C OLA1P38219 394 aaKnown RBP3.51□□□□□ -1.85
VPS33YLR396C RIO2P40160 425 aaKnown RBP3.51□□□□□ -1.85
VPS33YLR396C CTK3P46963 296 aaPredicted RBP3.51□□□□□ -1.85
VPS33YLR396C ORC5P50874 479 aa3.51□□□□□ -1.85
VPS33YLR396C RRB1Q04225 511 aaKnown RBP3.51□□□□□ -1.85
VPS33YLR396C YDL121CQ07541 149 aa3.51□□□□□ -1.85
VPS33YLR396C YMR085WP0CF18 432 aa3.5□□□□□ -1.85
VPS33YLR396C YPT53P36019 220 aa3.5□□□□□ -1.85
VPS33YLR396C LTP1P40347 161 aa3.5□□□□□ -1.85
VPS33YLR396C ASG1P40467 964 aa3.5□□□□□ -1.85
VPS33YLR396C ULP2P40537 1034 aaPredicted RBP3.5□□□□□ -1.85
VPS33YLR396C SIP4P46954 829 aa3.5□□□□□ -1.85
VPS33YLR396C BNA3P47039 444 aaKnown RBP3.5□□□□□ -1.85
VPS33YLR396C YMR018WQ04364 514 aa3.5□□□□□ -1.85
VPS33YLR396C GPN2Q08726 347 aaPredicted RBP3.5□□□□□ -1.85
VPS33YLR396C FUM1P08417 488 aaKnown RBP3.5□□□□□ -1.85
VPS33YLR396C UBP13P38187 747 aa3.5□□□□□ -1.85
VPS33YLR396C YJL107CP42947 387 aa3.5□□□□□ -1.85
VPS33YLR396C NUS1Q12063 375 aa3.5□□□□□ -1.85
VPS33YLR396C YOR019WQ99248 730 aa3.5□□□□□ -1.85
VPS33YLR396C USO1P25386 1790 aa3.49□□□□□ -1.85
VPS33YLR396C SUI3P09064 285 aaKnown RBP3.49□□□□□ -1.85
VPS33YLR396C MDM10P18409 493 aa3.49□□□□□ -1.85
VPS33YLR396C COQ3P27680 312 aa3.49□□□□□ -1.85
VPS33YLR396C ADE17P38009 592 aaKnown RBP3.49□□□□□ -1.85
VPS33YLR396C ARN1P38731 627 aa3.49□□□□□ -1.85
VPS33YLR396C YNG2P38806 282 aaKnown RBP3.49□□□□□ -1.85
VPS33YLR396C SEC31P38968 1273 aaKnown RBP3.49□□□□□ -1.85
VPS33YLR396C XBP1P40489 647 aa3.49□□□□□ -1.85
VPS33YLR396C ERG13P54839 491 aaKnown RBP3.49□□□□□ -1.85
VPS33YLR396C MUB1Q03162 620 aa3.49□□□□□ -1.85
VPS33YLR396C YML122CQ03207 126 aa3.49□□□□□ -1.85
VPS33YLR396C RPA190P10964 1664 aaKnown RBP3.49□□□□□ -1.85
VPS33YLR396C PET123P17558 318 aa3.48□□□□□ -1.85
VPS33YLR396C MSS51P32335 436 aa3.48□□□□□ -1.85
VPS33YLR396C YME2P32843 850 aa3.48□□□□□ -1.85
VPS33YLR396C OCT1P35999 772 aa3.48□□□□□ -1.85
VPS33YLR396C TPA1P40032 644 aaKnown RBP3.48□□□□□ -1.85
VPS33YLR396C SLZ1P40167 298 aa3.48□□□□□ -1.85
VPS33YLR396C YJR061WP40355 935 aa3.48□□□□□ -1.85
VPS33YLR396C RPN11P43588 306 aaKnown RBP3.48□□□□□ -1.85
VPS33YLR396C FCP1Q03254 732 aa3.48□□□□□ -1.85
VPS33YLR396C RSM28Q03430 361 aa3.48□□□□□ -1.85
VPS33YLR396C UBX2Q04228 584 aa3.48□□□□□ -1.85
VPS33YLR396C PFA4Q12006 378 aa3.48□□□□□ -1.85
VPS33YLR396C NBP2Q12163 236 aa3.48□□□□□ -1.85
VPS33YLR396C GAL4P04386 881 aa3.48□□□□□ -1.85
VPS33YLR396C KAR3P17119 729 aa3.48□□□□□ -1.85
VPS33YLR396C LHS1P36016 881 aa3.48□□□□□ -1.85
VPS33YLR396C HEL1P36113 551 aa3.48□□□□□ -1.85
VPS33YLR396C ALY1P36117 915 aa3.48□□□□□ -1.85
VPS33YLR396C PCH2P38126 564 aa3.48□□□□□ -1.85
VPS33YLR396C MRX1P40050 688 aa3.48□□□□□ -1.85
VPS33YLR396C IME4P41833 600 aa3.48□□□□□ -1.85
VPS33YLR396C INN1P53901 409 aa3.48□□□□□ -1.85
VPS33YLR396C SPO19Q03029 223 aa3.48□□□□□ -1.85
VPS33YLR396C RBA50Q04418 439 aa3.48□□□□□ -1.85
VPS33YLR396C SFH1Q06168 426 aa3.48□□□□□ -1.85
VPS33YLR396C PIG1Q06216 648 aa3.48□□□□□ -1.85
VPS33YLR396C GPA1P08539 472 aa3.47□□□□□ -1.85
VPS33YLR396C RPL19AP0CX82 189 aaKnown RBP3.47□□□□□ -1.85
VPS33YLR396C RPL19BP0CX83 189 aaPredicted RBP3.47□□□□□ -1.85
VPS33YLR396C MRP2P10663 115 aaPredicted RBP3.47□□□□□ -1.85
VPS33YLR396C CDC60P26637 1090 aaKnown RBP3.47□□□□□ -1.85
VPS33YLR396C CDC15P27636 974 aa3.47□□□□□ -1.85
VPS33YLR396C CHS3P29465 1165 aa3.47□□□□□ -1.85
VPS33YLR396C SOF1P33750 489 aaKnown RBP3.47□□□□□ -1.85
VPS33YLR396C PRX1P34227 261 aaKnown RBP3.47□□□□□ -1.85
VPS33YLR396C ECM10P39987 644 aa3.47□□□□□ -1.85
VPS33YLR396C SEC24P40482 926 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms