RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C SNU56Q03782 492 aaKnown RBP4.44□□□□□ -1.7
CDC42YLR229C KRE28Q04431 385 aa4.44□□□□□ -1.7
CDC42YLR229C CDD1Q06549 142 aa4.44□□□□□ -1.7
CDC42YLR229C RXT3Q07458 294 aa4.44□□□□□ -1.7
CDC42YLR229C AIM39Q08223 395 aa4.44□□□□□ -1.7
CDC42YLR229C CIR2Q08822 631 aa4.44□□□□□ -1.7
CDC42YLR229C FAP7Q12055 197 aaPredicted RBP4.44□□□□□ -1.7
CDC42YLR229C EMP46Q12396 444 aa4.44□□□□□ -1.7
CDC42YLR229C SPE4Q12455 300 aa4.44□□□□□ -1.7
CDC42YLR229C RRD2Q12461 358 aa4.44□□□□□ -1.7
CDC42YLR229C CTF3Q12748 733 aa4.44□□□□□ -1.7
CDC42YLR229C ADE4P04046 510 aaKnown RBP4.43□□□□□ -1.7
CDC42YLR229C CDC24P11433 854 aaPredicted RBP4.43□□□□□ -1.7
CDC42YLR229C YAK1P14680 807 aa4.43□□□□□ -1.7
CDC42YLR229C TSR4P25040 408 aa4.43□□□□□ -1.7
CDC42YLR229C MEI4P29467 408 aa4.43□□□□□ -1.7
CDC42YLR229C TPS2P31688 896 aaKnown RBP4.43□□□□□ -1.7
CDC42YLR229C BCS1P32839 456 aa4.43□□□□□ -1.7
CDC42YLR229C RIB7P33312 244 aa4.43□□□□□ -1.7
CDC42YLR229C BUD2P33314 1104 aa4.43□□□□□ -1.7
CDC42YLR229C SRB2P34162 210 aa4.43□□□□□ -1.7
CDC42YLR229C KES1P35844 434 aaKnown RBP4.43□□□□□ -1.7
CDC42YLR229C MSR1P38714 643 aa4.43□□□□□ -1.7
CDC42YLR229C PCF11P39081 626 aaPredicted RBP4.43□□□□□ -1.7
CDC42YLR229C ERP2P39704 215 aa4.43□□□□□ -1.7
CDC42YLR229C FLC2P39719 783 aa4.43□□□□□ -1.7
CDC42YLR229C RPT2P40327 437 aaKnown RBP4.43□□□□□ -1.7
CDC42YLR229C MET18P40469 1032 aa4.43□□□□□ -1.7
CDC42YLR229C YIL108WP40483 696 aaKnown RBP4.43□□□□□ -1.7
CDC42YLR229C DPH1P40487 425 aaKnown RBP4.43□□□□□ -1.7
CDC42YLR229C YIL054WP40524 105 aa4.43□□□□□ -1.7
CDC42YLR229C MKT1P40850 830 aaKnown RBP4.43□□□□□ -1.7
CDC42YLR229C STB1P42845 420 aa4.43□□□□□ -1.7
CDC42YLR229C PMT3P47190 753 aa4.43□□□□□ -1.7
CDC42YLR229C USE1P53146 245 aa4.43□□□□□ -1.7
CDC42YLR229C NMA2P53204 395 aa4.43□□□□□ -1.7
CDC42YLR229C NOP15P53927 220 aaPredicted RBP4.43□□□□□ -1.7
CDC42YLR229C MUK1Q02866 612 aa4.43□□□□□ -1.7
CDC42YLR229C RCF1Q03713 159 aa4.43□□□□□ -1.7
CDC42YLR229C CDA1Q06702 301 aa4.43□□□□□ -1.7
CDC42YLR229C NSE1Q07913 336 aa4.43□□□□□ -1.7
CDC42YLR229C HRT3Q12347 344 aa4.43□□□□□ -1.7
CDC42YLR229C MDM20Q12387 796 aaKnown RBP4.43□□□□□ -1.7
CDC42YLR229C VPS5Q92331 675 aa4.43□□□□□ -1.7
CDC42YLR229C PAB1P04147 577 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7 RIP-Chip
CDC42YLR229C CDC9P04819 755 aa4.42□□□□□ -1.7
CDC42YLR229C ILS1P09436 1072 aaKnown RBP4.42□□□□□ -1.7
CDC42YLR229C ATR1P13090 542 aa4.42□□□□□ -1.7
CDC42YLR229C GAS1P22146 559 aaKnown RBP4.42□□□□□ -1.7
CDC42YLR229C MEF1P25039 761 aa4.42□□□□□ -1.7
CDC42YLR229C SAT4P25333 603 aaKnown RBP4.42□□□□□ -1.7
CDC42YLR229C SNT1P25357 1226 aa4.42□□□□□ -1.7
CDC42YLR229C SED4P25365 1065 aa4.42□□□□□ -1.7
CDC42YLR229C FRE1P32791 686 aa4.42□□□□□ -1.7
CDC42YLR229C PEX2P32800 271 aa4.42□□□□□ -1.7
CDC42YLR229C UTP11P34247 250 aaPredicted RBP4.42□□□□□ -1.7
CDC42YLR229C KDX1P36005 433 aa4.42□□□□□ -1.7
CDC42YLR229C AGP2P38090 596 aa4.42□□□□□ -1.7
CDC42YLR229C SAW1P39735 261 aa4.42□□□□□ -1.7
CDC42YLR229C ALD5P40047 520 aaKnown RBP4.42□□□□□ -1.7
CDC42YLR229C DSE1P40077 573 aa4.42□□□□□ -1.7
CDC42YLR229C RSC8P43609 557 aaKnown RBP4.42□□□□□ -1.7
CDC42YLR229C ARC1P46672 376 aaKnown RBP4.42□□□□□ -1.7
CDC42YLR229C TAF1P46677 1066 aa4.42□□□□□ -1.7
CDC42YLR229C SAE2P46946 345 aa4.42□□□□□ -1.7
CDC42YLR229C ASG7P46993 209 aa4.42□□□□□ -1.7
CDC42YLR229C TY4A-JP47023 414 aa4.42□□□□□ -1.7
CDC42YLR229C NUP84P52891 726 aa4.42□□□□□ -1.7
CDC42YLR229C BRE5P53741 515 aaKnown RBP4.42□□□□□ -1.7
CDC42YLR229C YNL134CP53912 376 aaKnown RBP4.42□□□□□ -1.7
CDC42YLR229C YNL058CP53947 316 aa4.42□□□□□ -1.7
CDC42YLR229C ELP3Q02908 557 aaKnown RBP4.42□□□□□ -1.7
CDC42YLR229C MUB1Q03162 620 aa4.42□□□□□ -1.7
CDC42YLR229C GRX3Q03835 250 aa4.42□□□□□ -1.7
CDC42YLR229C YMR226CQ05016 267 aaKnown RBP4.42□□□□□ -1.7
CDC42YLR229C ARR1Q06596 294 aa4.42□□□□□ -1.7
CDC42YLR229C DIS3Q08162 1001 aaKnown RBP4.42□□□□□ -1.7
CDC42YLR229C PEX15Q08215 383 aa4.42□□□□□ -1.7
CDC42YLR229C SNX3Q08826 162 aaKnown RBP4.42□□□□□ -1.7
CDC42YLR229C GPB1Q08886 897 aa4.42□□□□□ -1.7
CDC42YLR229C YLR053CQ12026 108 aa4.42□□□□□ -1.7
CDC42YLR229C VPS54Q12071 889 aa4.42□□□□□ -1.7
CDC42YLR229C SUT2Q12286 268 aa4.42□□□□□ -1.7
CDC42YLR229C AVL9Q12500 764 aa4.42□□□□□ -1.7
CDC42YLR229C ADF1Q2V2Q1 113 aa4.42□□□□□ -1.7
CDC42YLR229C BRR1Q99177 341 aaPredicted RBP4.42□□□□□ -1.7
CDC42YLR229C REP1P03871 373 aa4.41□□□□□ -1.7
CDC42YLR229C SSC1P0CS90 654 aaKnown RBP4.41□□□□□ -1.7
CDC42YLR229C YPK1P12688 680 aaKnown RBP4.41□□□□□ -1.7
CDC42YLR229C GCN3P14741 305 aa4.41□□□□□ -1.7
CDC42YLR229C CNA1P23287 553 aa4.41□□□□□ -1.7
CDC42YLR229C VPS3P23643 1011 aa4.41□□□□□ -1.7
CDC42YLR229C RSA4P25382 515 aaKnown RBP4.41□□□□□ -1.7
CDC42YLR229C LRE1P25579 583 aaKnown RBP4.41□□□□□ -1.7
CDC42YLR229C YCR015CP25616 317 aa4.41□□□□□ -1.7
CDC42YLR229C ZIP1P31111 875 aa4.41□□□□□ -1.7
CDC42YLR229C TFC1P32367 649 aa4.41□□□□□ -1.7
CDC42YLR229C SSE2P32590 693 aaKnown RBP4.41□□□□□ -1.7
CDC42YLR229C TIF3P34167 436 aaKnown RBP4.41□□□□□ -1.7
CDC42YLR229C MTC2P34246 357 aa4.41□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms