RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CBF5	YLR175W	DIT1	P21623	536 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	SEC14	P24280	304 aa	Known RBP	4.56	□□□□□ -1.68
CBF5	YLR175W	RBK1	P25332	333 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	SGF29	P25554	259 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	DCC1	P25559	380 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	PPZ1	P26570	692 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	PHA2	P32452	334 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	STE13	P33894	931 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	PXA2	P34230	853 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	RRP14	P36080	434 aa	Known RBP	4.56	□□□□□ -1.68
CBF5	YLR175W	RIM2	P38127	377 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	LDB7	P38210	180 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	YHR182W	P38870	785 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	RPS14B	P39516	138 aa	Known RBP	4.56	□□□□□ -1.68
CBF5	YLR175W	RPH1	P39956	796 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	HAT2	P39984	401 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	YJR061W	P40355	935 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	PFK26	P40433	827 aa	Known RBP	4.56	□□□□□ -1.68
CBF5	YLR175W	PAN6	P40459	309 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	RMD8	P43620	662 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	ARC1	P46672	376 aa	Known RBP	4.56	□□□□□ -1.68
CBF5	YLR175W	GLG2	P47011	380 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	PET130	P47065	347 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	TAF6	P53040	516 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	VEL1	P53058	206 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	YMR030W-A	Q3E760	96 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	GLN4	P13188	809 aa	Known RBP	4.55	□□□□□ -1.68
CBF5	YLR175W	TRX2	P22803	104 aa	Known RBP	4.55	□□□□□ -1.68
CBF5	YLR175W	PUP3	P25451	205 aa	Known RBP	4.55	□□□□□ -1.68
CBF5	YLR175W	BEM1	P29366	551 aa		4.55	□□□□□ -1.68
CBF5	YLR175W	MF(ALPHA)2	P32435	120 aa		4.55	□□□□□ -1.68
CBF5	YLR175W	HSM3	P38348	480 aa		4.55	□□□□□ -1.68
CBF5	YLR175W	RIM11	P38615	370 aa		4.55	□□□□□ -1.68
CBF5	YLR175W	SRP72	P38688	640 aa	Known RBP	4.55	□□□□□ -1.68
CBF5	YLR175W	GND1	P38720	489 aa	Known RBP	4.55	□□□□□ -1.68
CBF5	YLR175W	MED6	P38782	295 aa		4.55	□□□□□ -1.68
CBF5	YLR175W	OAF1	P39720	1047 aa	Predicted RBP	4.55	□□□□□ -1.68
CBF5	YLR175W	SET2	P46995	733 aa	Known RBP	4.55	□□□□□ -1.68
CBF5	YLR175W	YJR124C	P47159	448 aa		4.55	□□□□□ -1.68
CBF5	YLR175W	NUP84	P52891	726 aa		4.55	□□□□□ -1.68
CBF5	YLR175W	PPT1	P53043	513 aa		4.55	□□□□□ -1.68
CBF5	YLR175W	MNT2	P53059	558 aa		4.55	□□□□□ -1.68
CBF5	YLR175W	SPC105	P53148	917 aa		4.55	□□□□□ -1.68
CBF5	YLR175W	IST1	P53843	298 aa	Predicted RBP	4.55	□□□□□ -1.68
CBF5	YLR175W	TDA7	P53882	636 aa	Predicted RBP	4.55	□□□□□ -1.68
CBF5	YLR175W	REG1	Q00816	1014 aa		4.55	□□□□□ -1.68
CBF5	YLR175W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	RIP-Chip
CBF5	YLR175W	YMR209C	Q03648	457 aa		4.55	□□□□□ -1.68
CBF5	YLR175W	RPN9	Q04062	393 aa	Known RBP	4.55	□□□□□ -1.68
CBF5	YLR175W	PPN1	Q04119	674 aa		4.55	□□□□□ -1.68
CBF5	YLR175W	SHE9	Q04172	456 aa		4.55	□□□□□ -1.68
CBF5	YLR175W	HBT1	Q07653	1046 aa	Known RBP	4.55	□□□□□ -1.68
CBF5	YLR175W	HRK1	Q08732	759 aa	Known RBP	4.55	□□□□□ -1.68
CBF5	YLR175W	STE2	D6VTK4	431 aa		4.54	□□□□□ -1.68
CBF5	YLR175W	FUS1	P11710	512 aa		4.54	□□□□□ -1.68
CBF5	YLR175W	ABF1	P14164	731 aa		4.54	□□□□□ -1.68
CBF5	YLR175W	CDC34	P14682	295 aa		4.54	□□□□□ -1.68
CBF5	YLR175W	NSP1	P14907	823 aa	Known RBP	4.54	□□□□□ -1.68
CBF5	YLR175W	NPR1	P22211	790 aa		4.54	□□□□□ -1.68
CBF5	YLR175W	AAD3	P25612	363 aa		4.54	□□□□□ -1.68
CBF5	YLR175W	MRE11	P32829	692 aa		4.54	□□□□□ -1.68
CBF5	YLR175W	TFC3	P34111	1160 aa		4.54	□□□□□ -1.68
CBF5	YLR175W	PHO11	P35842	467 aa		4.54	□□□□□ -1.68
CBF5	YLR175W	STB6	P36085	766 aa		4.54	□□□□□ -1.68
CBF5	YLR175W	YBR062C	P38239	180 aa		4.54	□□□□□ -1.68
CBF5	YLR175W	PHO12	P38693	467 aa		4.54	□□□□□ -1.68
CBF5	YLR175W	STN1	P38960	494 aa		4.54	□□□□□ -1.68
CBF5	YLR175W	YJL206C	P39529	758 aa		4.54	□□□□□ -1.68
CBF5	YLR175W	ACO2	P39533	789 aa		4.54	□□□□□ -1.68
CBF5	YLR175W	YHB1	P39676	399 aa	Known RBP	4.54	□□□□□ -1.68
CBF5	YLR175W	PIC2	P40035	300 aa		4.54	□□□□□ -1.68
CBF5	YLR175W	ALG8	P40351	577 aa		4.54	□□□□□ -1.68
CBF5	YLR175W	YIR007W	P40566	764 aa		4.54	□□□□□ -1.68
CBF5	YLR175W	GTS1	P40956	396 aa		4.54	□□□□□ -1.68
CBF5	YLR175W	IME4	P41833	600 aa		4.54	□□□□□ -1.68
CBF5	YLR175W	LSB3	P43603	459 aa	Known RBP	4.54	□□□□□ -1.68
CBF5	YLR175W	GCD14	P46959	383 aa	Predicted RBP	4.54	□□□□□ -1.68
CBF5	YLR175W	YGL140C	P53120	1219 aa		4.54	□□□□□ -1.68
CBF5	YLR175W	YDR131C	Q03899	556 aa		4.54	□□□□□ -1.68
CBF5	YLR175W	BLS1	Q06071	122 aa		4.54	□□□□□ -1.68
CBF5	YLR175W	RSB1	Q08417	382 aa		4.54	□□□□□ -1.68
CBF5	YLR175W	TGL5	Q12043	749 aa		4.54	□□□□□ -1.68
CBF5	YLR175W	CMR1	Q12510	522 aa	Known RBP	4.54	□□□□□ -1.68
CBF5	YLR175W	NOT5	Q12514	560 aa	Predicted RBP	4.54	□□□□□ -1.68
CBF5	YLR175W	CET1	O13297	549 aa	Predicted RBP	4.53	□□□□□ -1.68
CBF5	YLR175W	MSF1	P08425	469 aa		4.53	□□□□□ -1.68
CBF5	YLR175W	AMD1	P15274	810 aa	Known RBP	4.53	□□□□□ -1.68
CBF5	YLR175W	APA1	P16550	321 aa	Known RBP	4.53	□□□□□ -1.68
CBF5	YLR175W	UBA1	P22515	1024 aa	Known RBP	4.53	□□□□□ -1.68
CBF5	YLR175W	FPS1	P23900	669 aa		4.53	□□□□□ -1.68
CBF5	YLR175W	YCR099C	P25657	155 aa		4.53	□□□□□ -1.68
CBF5	YLR175W	BRF1	P29056	596 aa		4.53	□□□□□ -1.68
CBF5	YLR175W	SPS19	P32573	292 aa	Known RBP	4.53	□□□□□ -1.68
CBF5	YLR175W	STE5	P32917	917 aa		4.53	□□□□□ -1.68
CBF5	YLR175W	PMT1	P33775	817 aa		4.53	□□□□□ -1.68
CBF5	YLR175W	LRG1	P35688	1017 aa		4.53	□□□□□ -1.68
CBF5	YLR175W	SPC42	P36094	363 aa		4.53	□□□□□ -1.68
CBF5	YLR175W	PHO89	P38361	574 aa		4.53	□□□□□ -1.68
CBF5	YLR175W	MUP3	P38734	546 aa		4.53	□□□□□ -1.68
CBF5	YLR175W	LRP1	P38801	184 aa	Known RBP	4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 39.3 ms