RNA–Protein interactions for RNA: YKL197C

PEX1, Transcript of AAA-peroxin, yeast

Gene PEX1, Length 3,132 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX1	YKL197C	PAR32	Q12515	295 aa	Known RBP	3.44	□□□□□ -1.86
PEX1	YKL197C	RRP12	Q12754	1228 aa	Known RBP	3.44	□□□□□ -1.86
PEX1	YKL197C	YLR419W	Q06698	1435 aa	Known RBP	3.44	□□□□□ -1.86
PEX1	YKL197C	NFT1	P0CE68	1218 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	FUR1	P18562	216 aa	Known RBP	3.44	□□□□□ -1.86
PEX1	YKL197C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	3.44	□□□□□ -1.86	not detected
PEX1	YKL197C	DAL7	P21826	554 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	ERG3	P32353	365 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	RAD5	P32849	1169 aa	Predicted RBP	3.44	□□□□□ -1.86
PEX1	YKL197C	BEM3	P32873	1128 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	LOT5	P34234	306 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	SUL1	P38359	859 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	SCC4	P40090	624 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	THI12	P42883	340 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	THI5	P43534	340 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	GLG2	P47011	380 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	YJR111C	P47148	283 aa	Known RBP	3.44	□□□□□ -1.86
PEX1	YKL197C	PSP2	P50109	593 aa	Known RBP	3.44	□□□□□ -1.86
PEX1	YKL197C	CGR1	P53188	120 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	PEX25	Q02969	394 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	GIS4	Q04233	774 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	PIG1	Q06216	648 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	MHR1	Q06630	226 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	THI13	Q07748	340 aa		3.44	□□□□□ -1.86
PEX1	YKL197C	KRE5	P22023	1365 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	PMA1	P05030	918 aa	Known RBP	3.43	□□□□□ -1.86
PEX1	YKL197C	ADE3	P07245	946 aa	Known RBP	3.43	□□□□□ -1.86
PEX1	YKL197C	MSS18	P08593	268 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	MATALPHA2	P0CY08	210 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	HMLALPHA2	P0CY09	210 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	MDL1	P33310	695 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	DBP7	P36120	742 aa	Known RBP	3.43	□□□□□ -1.86
PEX1	YKL197C	MRPL37	P36532	105 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	NCL1	P38205	684 aa	Known RBP	3.43	□□□□□ -1.86
PEX1	YKL197C	SKN7	P38889	622 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	FHL1	P39521	936 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	ALG5	P40350	334 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	ELP2	P42935	788 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	IDS2	P46958	469 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	GTO1	P48239	356 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	BIO5	P53744	561 aa	Known RBP	3.43	□□□□□ -1.86
PEX1	YKL197C	MRPL19	P53875	158 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	VPS9	P54787	451 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	ARP4	P80428	489 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	VBA4	Q04602	768 aa	Known RBP	3.43	□□□□□ -1.86
PEX1	YKL197C	YPR147C	Q06522	304 aa	Known RBP	3.43	□□□□□ -1.86
PEX1	YKL197C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	3.43	□□□□□ -1.86	not detected
PEX1	YKL197C	SPE3	Q12074	293 aa	Known RBP	3.43	□□□□□ -1.86
PEX1	YKL197C	COQ4	O13525	335 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	GCN4	P03069	281 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	YAK1	P14680	807 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	AEP2	P22136	580 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	VMA16	P23968	213 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	MNE1	P24720	663 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	HSP30	P25619	332 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	THI4	P32318	326 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	YER010C	P40011	234 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	ATM1	P40416	690 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	UTP25	P40498	721 aa	Known RBP	3.43	□□□□□ -1.86
PEX1	YKL197C	HXT14	P42833	540 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	IMD3	P50095	523 aa	Known RBP	3.43	□□□□□ -1.86
PEX1	YKL197C	BIO3	P50277	480 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	RBG2	P53295	368 aa	Known RBP	3.43	□□□□□ -1.86
PEX1	YKL197C	IMP4	P53941	290 aa	Known RBP	3.43	□□□□□ -1.86
PEX1	YKL197C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	3.43	□□□□□ -1.86	not detected
PEX1	YKL197C	EEB1	Q02891	456 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	GTB1	Q04924	702 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	DUS3	Q06053	668 aa	Known RBP	3.43	□□□□□ -1.86
PEX1	YKL197C	ARO10	Q06408	635 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	GPN3	Q06543	272 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	PML1	Q07930	204 aa	Predicted RBP	3.43	□□□□□ -1.86
PEX1	YKL197C	YOL019W	Q08157	551 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	MUM3	Q08750	479 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	DDC1	Q08949	612 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	NCA2	Q12374	616 aa		3.43	□□□□□ -1.86
PEX1	YKL197C	WHI2	P12611	486 aa		3.42	□□□□□ -1.86
PEX1	YKL197C	POL3	P15436	1097 aa		3.42	□□□□□ -1.86
PEX1	YKL197C	IME1	P21190	360 aa		3.42	□□□□□ -1.86
PEX1	YKL197C	EMC1	P25574	760 aa		3.42	□□□□□ -1.86
PEX1	YKL197C	LIP5	P32875	414 aa		3.42	□□□□□ -1.86
PEX1	YKL197C	SPO23	P33757	523 aa		3.42	□□□□□ -1.86
PEX1	YKL197C	MRPL10	P36520	322 aa		3.42	□□□□□ -1.86
PEX1	YKL197C	NEM1	P38757	446 aa		3.42	□□□□□ -1.86
PEX1	YKL197C	RPH1	P39956	796 aa		3.42	□□□□□ -1.86
PEX1	YKL197C	SPF1	P39986	1215 aa	Known RBP	3.42	□□□□□ -1.86
PEX1	YKL197C	RTR1	P40084	226 aa	Predicted RBP	3.42	□□□□□ -1.86
PEX1	YKL197C	INP51	P40559	946 aa	Known RBP	3.42	□□□□□ -1.86
PEX1	YKL197C	YGL176C	P46945	554 aa		3.42	□□□□□ -1.86
PEX1	YKL197C	YJL181W	P46987	611 aa		3.42	□□□□□ -1.86
PEX1	YKL197C	ENT3	P47160	408 aa		3.42	□□□□□ -1.86
PEX1	YKL197C	MCM6	P53091	1017 aa	Known RBP	3.42	□□□□□ -1.86
PEX1	YKL197C	ARE2	P53629	642 aa	Known RBP	3.42	□□□□□ -1.86
PEX1	YKL197C	PGA2	P53903	129 aa		3.42	□□□□□ -1.86
PEX1	YKL197C	MUK1	Q02866	612 aa		3.42	□□□□□ -1.86
PEX1	YKL197C	VPS38	Q05919	439 aa		3.42	□□□□□ -1.86
PEX1	YKL197C	TDA6	Q06466	467 aa		3.42	□□□□□ -1.86
PEX1	YKL197C	PUS7	Q08647	676 aa	Known RBP	3.42	□□□□□ -1.86
PEX1	YKL197C	DIN7	Q12086	430 aa		3.42	□□□□□ -1.86
PEX1	YKL197C	ABF1	P14164	731 aa		3.42	□□□□□ -1.86
PEX1	YKL197C	AMD2	P22580	549 aa		3.42	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms