RNA–Protein interactions for RNA: YKL122C

SRP21, Transcript of Subunit of the signal recognition particle (SRP), yeast

Gene SRP21, Length 504 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRP21	YKL122C	SMC3	P47037	1230 aa		3.21	□□□□□ -1.9
SRP21	YKL122C	RPS7B	P48164	190 aa	Known RBP	3.21	□□□□□ -1.9
SRP21	YKL122C	HOS2	P53096	452 aa	Predicted RBP	3.21	□□□□□ -1.9
SRP21	YKL122C	INN1	P53901	409 aa		3.21	□□□□□ -1.9
SRP21	YKL122C	SMA1	Q02651	245 aa		3.21	□□□□□ -1.9
SRP21	YKL122C	INA17	Q02888	182 aa		3.21	□□□□□ -1.9
SRP21	YKL122C	RSF1	Q05043	376 aa		3.21	□□□□□ -1.9
SRP21	YKL122C	ADE13	Q05911	482 aa	Known RBP	3.21	□□□□□ -1.9
SRP21	YKL122C	RIX7	Q07844	837 aa	Known RBP	3.21	□□□□□ -1.9
SRP21	YKL122C	NBP2	Q12163	236 aa		3.21	□□□□□ -1.9
SRP21	YKL122C	HNM1	P19807	563 aa		3.2	□□□□□ -1.9
SRP21	YKL122C	TRX2	P22803	104 aa	Known RBP	3.2	□□□□□ -1.9
SRP21	YKL122C	LCB1	P25045	558 aa	Known RBP	3.2	□□□□□ -1.9
SRP21	YKL122C	PPZ1	P26570	692 aa		3.2	□□□□□ -1.9
SRP21	YKL122C	RAD24	P32641	659 aa		3.2	□□□□□ -1.9
SRP21	YKL122C	YKL050C	P35736	922 aa		3.2	□□□□□ -1.9
SRP21	YKL122C	SNU114	P36048	1008 aa	Known RBP	3.2	□□□□□ -1.9
SRP21	YKL122C	ARP1	P38696	384 aa		3.2	□□□□□ -1.9
SRP21	YKL122C	BZZ1	P38822	633 aa		3.2	□□□□□ -1.9
SRP21	YKL122C	FET5	P43561	622 aa		3.2	□□□□□ -1.9
SRP21	YKL122C	AAD10	P47182	288 aa		3.2	□□□□□ -1.9
SRP21	YKL122C	PKP2	P53170	491 aa		3.2	□□□□□ -1.9
SRP21	YKL122C	CBK1	P53894	756 aa		3.2	□□□□□ -1.9
SRP21	YKL122C	ZDS2	P54786	942 aa		3.2	□□□□□ -1.9
SRP21	YKL122C	ATG26	Q06321	1198 aa		3.2	□□□□□ -1.9
SRP21	YKL122C	ENT4	Q07872	247 aa		3.2	□□□□□ -1.9
SRP21	YKL122C	APL4	Q12028	832 aa		3.2	□□□□□ -1.9
SRP21	YKL122C	BSC1	Q12140	328 aa		3.2	□□□□□ -1.9
SRP21	YKL122C	GID7	P25569	745 aa		3.19	□□□□□ -1.9
SRP21	YKL122C	PGS1	P25578	521 aa		3.19	□□□□□ -1.9
SRP21	YKL122C	PDB1	P32473	366 aa	Known RBP	3.19	□□□□□ -1.9
SRP21	YKL122C	DIA4	P38705	446 aa	Predicted RBP	3.19	□□□□□ -1.9
SRP21	YKL122C	PHO90	P39535	881 aa		3.19	□□□□□ -1.9
SRP21	YKL122C	BUR6	P40096	142 aa		3.19	□□□□□ -1.9
SRP21	YKL122C	YJR061W	P40355	935 aa		3.19	□□□□□ -1.9
SRP21	YKL122C	STR3	P53101	465 aa	Known RBP	3.19	□□□□□ -1.9
SRP21	YKL122C	YDR415C	Q04033	374 aa	Predicted RBP	3.19	□□□□□ -1.9
SRP21	YKL122C	YLR352W	Q06479	807 aa		3.19	□□□□□ -1.9
SRP21	YKL122C	PSR1	Q07800	427 aa		3.19	□□□□□ -1.9
SRP21	YKL122C	TAH18	Q12181	623 aa		3.19	□□□□□ -1.9
SRP21	YKL122C	BAR1	P12630	587 aa		3.18	□□□□□ -1.9
SRP21	YKL122C	PWP1	P21304	576 aa	Known RBP	3.18	□□□□□ -1.9
SRP21	YKL122C	YNG2	P38806	282 aa	Known RBP	3.18	□□□□□ -1.9
SRP21	YKL122C	ANS1	P38832	159 aa		3.18	□□□□□ -1.9
SRP21	YKL122C	DHH1	P39517	506 aa	Known RBP	3.18	□□□□□ -1.9
SRP21	YKL122C	DPH1	P40487	425 aa	Known RBP	3.18	□□□□□ -1.9
SRP21	YKL122C	SIP4	P46954	829 aa		3.18	□□□□□ -1.9
SRP21	YKL122C	NUP100	Q02629	959 aa		3.18	□□□□□ -1.9
SRP21	YKL122C	FUM1	P08417	488 aa	Known RBP	3.17	□□□□□ -1.9
SRP21	YKL122C	CDC23	P16522	626 aa		3.17	□□□□□ -1.9
SRP21	YKL122C	SPE2	P21182	396 aa		3.17	□□□□□ -1.9
SRP21	YKL122C	RER1	P25560	188 aa		3.17	□□□□□ -1.9
SRP21	YKL122C	SEC1	P30619	724 aa	Known RBP	3.17	□□□□□ -1.9
SRP21	YKL122C	RPN2	P32565	945 aa	Known RBP	3.17	□□□□□ -1.9
SRP21	YKL122C	AZF1	P41696	914 aa		3.17	□□□□□ -1.9
SRP21	YKL122C	ARC1	P46672	376 aa	Known RBP	3.17	□□□□□ -1.9
SRP21	YKL122C	ATG27	P46989	271 aa		3.17	□□□□□ -1.9
SRP21	YKL122C	DIA3	P52290	468 aa		3.17	□□□□□ -1.9
SRP21	YKL122C	SOL4	P53315	255 aa		3.17	□□□□□ -1.9
SRP21	YKL122C	RAD30	Q04049	632 aa		3.17	□□□□□ -1.9
SRP21	YKL122C	RDR1	Q08904	546 aa		3.17	□□□□□ -1.9
SRP21	YKL122C	VMA16	P23968	213 aa		3.16	□□□□□ -1.9
SRP21	YKL122C	DPB3	P27344	201 aa		3.16	□□□□□ -1.9
SRP21	YKL122C	MCM4	P30665	933 aa	Known RBP	3.16	□□□□□ -1.9
SRP21	YKL122C	TSC10	P38342	320 aa		3.16	□□□□□ -1.9
SRP21	YKL122C	ERG7	P38604	731 aa		3.16	□□□□□ -1.9
SRP21	YKL122C	DBP8	P38719	431 aa		3.16	□□□□□ -1.9
SRP21	YKL122C	UBA4	P38820	440 aa		3.16	□□□□□ -1.9
SRP21	YKL122C	ELO1	P39540	310 aa		3.16	□□□□□ -1.9
SRP21	YKL122C	RGI2	P40188	164 aa		3.16	□□□□□ -1.9
SRP21	YKL122C	YIR014W	P40570	242 aa		3.16	□□□□□ -1.9
SRP21	YKL122C	SGM1	P47166	707 aa		3.16	□□□□□ -1.9
SRP21	YKL122C	CUL3	P53202	744 aa		3.16	□□□□□ -1.9
SRP21	YKL122C	MEP3	P53390	489 aa		3.16	□□□□□ -1.9
SRP21	YKL122C	BSC5	P53755	489 aa		3.16	□□□□□ -1.9
SRP21	YKL122C	YMR018W	Q04364	514 aa		3.16	□□□□□ -1.9
SRP21	YKL122C	EMI2	Q04409	500 aa	Known RBP	3.16	□□□□□ -1.9
SRP21	YKL122C	VIP1	Q06685	1146 aa	Known RBP	3.16	□□□□□ -1.9
SRP21	YKL122C	RTT109	Q07794	436 aa		3.16	□□□□□ -1.9
SRP21	YKL122C	RPS10A	Q08745	105 aa	Predicted RBP	3.16	□□□□□ -1.9
SRP21	YKL122C	SKM1	Q12469	655 aa		3.16	□□□□□ -1.9
SRP21	YKL122C	NKP1	Q12493	238 aa		3.16	□□□□□ -1.9
SRP21	YKL122C	SNF3	P10870	884 aa		3.15	□□□□□ -1.91
SRP21	YKL122C	CDC24	P11433	854 aa	Predicted RBP	3.15	□□□□□ -1.91
SRP21	YKL122C	GLN3	P18494	730 aa		3.15	□□□□□ -1.91
SRP21	YKL122C	ADH7	P25377	361 aa		3.15	□□□□□ -1.91
SRP21	YKL122C	TRS65	P32893	560 aa		3.15	□□□□□ -1.91
SRP21	YKL122C	PHD1	P36093	366 aa		3.15	□□□□□ -1.91
SRP21	YKL122C	RPS10B	P46784	105 aa	Known RBP	3.15	□□□□□ -1.91
SRP21	YKL122C	LYS4	P49367	693 aa	Predicted RBP	3.15	□□□□□ -1.91
SRP21	YKL122C	YSA1	Q01976	231 aa		3.15	□□□□□ -1.91
SRP21	YKL122C	GRC3	Q07845	632 aa		3.15	□□□□□ -1.91
SRP21	YKL122C	TCO89	Q08921	799 aa		3.15	□□□□□ -1.91
SRP21	YKL122C	CSR2	Q12734	1121 aa		3.15	□□□□□ -1.91
SRP21	YKL122C	ARG81	P05085	880 aa		3.14	□□□□□ -1.91
SRP21	YKL122C	PUT2	P07275	575 aa		3.14	□□□□□ -1.91
SRP21	YKL122C	PRP16	P15938	1071 aa	Predicted RBP	3.14	□□□□□ -1.91
SRP21	YKL122C	SSH4	P32343	579 aa		3.14	□□□□□ -1.91
SRP21	YKL122C	MIC60	P36112	540 aa		3.14	□□□□□ -1.91
SRP21	YKL122C	AGP2	P38090	596 aa		3.14	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 58.1 ms