RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W NTC20P38302 140 aaPredicted RBP3.82□□□□□ -1.8
UBP12YJL197W YGR079WP53249 370 aa3.82□□□□□ -1.8
UBP12YJL197W FHN1P53279 174 aa3.82□□□□□ -1.8
UBP12YJL197W IST1P53843 298 aaPredicted RBP3.82□□□□□ -1.8
UBP12YJL197W RSM28Q03430 361 aa3.82□□□□□ -1.8
UBP12YJL197W RPN9Q04062 393 aaKnown RBP3.82□□□□□ -1.8
UBP12YJL197W RRP45Q05636 305 aaKnown RBP3.82□□□□□ -1.8
UBP12YJL197W HBT1Q07653 1046 aaKnown RBP3.82□□□□□ -1.8
UBP12YJL197W PML1Q07930 204 aaPredicted RBP3.82□□□□□ -1.8
UBP12YJL197W ETT1Q08421 412 aaKnown RBP3.82□□□□□ -1.8
UBP12YJL197W RLM1Q12224 676 aa3.82□□□□□ -1.8
UBP12YJL197W TPK2P06245 380 aa3.81□□□□□ -1.8
UBP12YJL197W CDC6P09119 513 aa3.81□□□□□ -1.8
UBP12YJL197W CDC5P32562 705 aa3.81□□□□□ -1.8
UBP12YJL197W NTR2P36118 322 aaPredicted RBP3.81□□□□□ -1.8
UBP12YJL197W IRC8P47046 822 aa3.81□□□□□ -1.8
UBP12YJL197W BPL1P48445 690 aaPredicted RBP3.81□□□□□ -1.8
UBP12YJL197W TOM22P49334 152 aa3.81□□□□□ -1.8
UBP12YJL197W IMD4P50094 524 aaKnown RBP3.81□□□□□ -1.8
UBP12YJL197W FMS1P50264 508 aa3.81□□□□□ -1.8
UBP12YJL197W NUP84P52891 726 aa3.81□□□□□ -1.8
UBP12YJL197W RPT4P53549 437 aaKnown RBP3.81□□□□□ -1.8
UBP12YJL197W UBX3Q12229 455 aa3.81□□□□□ -1.8
UBP12YJL197W RPL3P14126 387 aaKnown RBP3.81□□□□□ -1.8
UBP12YJL197W TAL1P15019 335 aaKnown RBP3.81□□□□□ -1.8
UBP12YJL197W EST1P17214 699 aaPredicted RBP3.81□□□□□ -1.8
UBP12YJL197W CTP1P38152 299 aa3.81□□□□□ -1.8
UBP12YJL197W GCD10P41814 478 aa3.81□□□□□ -1.8
UBP12YJL197W YGR149WP48236 432 aa3.81□□□□□ -1.8
UBP12YJL197W CUE3P53137 624 aaKnown RBP3.81□□□□□ -1.8
UBP12YJL197W YGR127WP53275 312 aa3.81□□□□□ -1.8
UBP12YJL197W MRPS35P53292 345 aa3.81□□□□□ -1.8
UBP12YJL197W TOF2Q02208 771 aa3.81□□□□□ -1.8
UBP12YJL197W VTC3Q02725 835 aa3.81□□□□□ -1.8
UBP12YJL197W PLB2Q03674 706 aa3.81□□□□□ -1.8
UBP12YJL197W YFH1Q07540 174 aa3.81□□□□□ -1.8
UBP12YJL197W TAF3Q12297 353 aa3.81□□□□□ -1.8
UBP12YJL197W NDI1P32340 513 aa3.81□□□□□ -1.8
UBP12YJL197W RRP1P35178 278 aaPredicted RBP3.81□□□□□ -1.8
UBP12YJL197W THI2P38141 450 aa3.81□□□□□ -1.8
UBP12YJL197W SWP82P43554 623 aa3.81□□□□□ -1.8
UBP12YJL197W LAM5P43560 674 aa3.81□□□□□ -1.8
UBP12YJL197W STB2P46679 850 aa3.81□□□□□ -1.8
UBP12YJL197W MPS3P47069 682 aa3.81□□□□□ -1.8
UBP12YJL197W COS5P47187 383 aa3.81□□□□□ -1.8
UBP12YJL197W DIA3P52290 468 aa3.81□□□□□ -1.8
UBP12YJL197W GTF1P53260 183 aaPredicted RBP3.81□□□□□ -1.8
UBP12YJL197W RRB1Q04225 511 aaKnown RBP3.81□□□□□ -1.8
UBP12YJL197W COS7Q07788 383 aa3.81□□□□□ -1.8
UBP12YJL197W RUD3Q12234 484 aaKnown RBP3.81□□□□□ -1.8
UBP12YJL197W BUD5P25300 642 aaPredicted RBP3.8□□□□□ -1.8
UBP12YJL197W YJU2P28320 278 aaPredicted RBP3.8□□□□□ -1.8
UBP12YJL197W TIF3P34167 436 aaKnown RBP3.8□□□□□ -1.8
UBP12YJL197W HES1P35843 434 aa3.8□□□□□ -1.8
UBP12YJL197W MRPL4P36517 319 aa3.8□□□□□ -1.8
UBP12YJL197W HSM3P38348 480 aa3.8□□□□□ -1.8
UBP12YJL197W FUN12P39730 1002 aaKnown RBP3.8□□□□□ -1.8
UBP12YJL197W YTA12P40341 825 aa3.8□□□□□ -1.8
UBP12YJL197W MSY1P48527 492 aa3.8□□□□□ -1.8
UBP12YJL197W YGL138CP53122 345 aa3.8□□□□□ -1.8
UBP12YJL197W ERG5P54781 538 aa3.8□□□□□ -1.8
UBP12YJL197W MSC3Q05812 728 aa3.8□□□□□ -1.8
UBP12YJL197W YDL007C-AQ2V2Q0 85 aa3.8□□□□□ -1.8
UBP12YJL197W RFA2P26754 273 aaKnown RBP3.8□□□□□ -1.8
UBP12YJL197W CCL1P37366 393 aa3.8□□□□□ -1.8
UBP12YJL197W MAF1P41910 395 aa3.8□□□□□ -1.8
UBP12YJL197W SNO2P53823 222 aa3.8□□□□□ -1.8
UBP12YJL197W AQR1P53943 586 aa3.8□□□□□ -1.8
UBP12YJL197W DAK1P54838 584 aaKnown RBP3.8□□□□□ -1.8
UBP12YJL197W ACL4Q03771 387 aa3.8□□□□□ -1.8
UBP12YJL197W YOR352WQ08816 343 aa3.8□□□□□ -1.8
UBP12YJL197W VPS54Q12071 889 aa3.8□□□□□ -1.8
UBP12YJL197W COQ2P32378 372 aa3.8□□□□□ -1.8
UBP12YJL197W TUL1P36096 758 aa3.8□□□□□ -1.8
UBP12YJL197W RPF2P36160 344 aaKnown RBP3.8□□□□□ -1.8
UBP12YJL197W MLH1P38920 769 aa3.8□□□□□ -1.8
UBP12YJL197W ICP55P40051 511 aa3.8□□□□□ -1.8
UBP12YJL197W YJL132WP47014 750 aa3.8□□□□□ -1.8
UBP12YJL197W RHO5P53879 331 aaKnown RBP3.8□□□□□ -1.8
UBP12YJL197W YSH1Q06224 779 aaPredicted RBP3.8□□□□□ -1.8
UBP12YJL197W RXT3Q07458 294 aa3.8□□□□□ -1.8
UBP12YJL197W ENB1Q08299 606 aa3.8□□□□□ -1.8
UBP12YJL197W AEP3Q12089 606 aa3.8□□□□□ -1.8
UBP12YJL197W YDR061WQ12298 539 aa3.8□□□□□ -1.8
UBP12YJL197W YLR278CQ05854 1341 aa3.8□□□□□ -1.8
UBP12YJL197W HXK2P04807 486 aaKnown RBP3.79□□□□□ -1.8
UBP12YJL197W LPD1P09624 499 aaKnown RBP3.79□□□□□ -1.8
UBP12YJL197W HOM2P13663 365 aaKnown RBP3.79□□□□□ -1.8
UBP12YJL197W YBR144CP34215 104 aa3.79□□□□□ -1.8
UBP12YJL197W COY1P34237 679 aa3.79□□□□□ -1.8
UBP12YJL197W ARO9P38840 513 aaPredicted RBP3.79□□□□□ -1.8
UBP12YJL197W YML133CQ03099 1374 aa3.79□□□□□ -1.8
UBP12YJL197W YLL067CQ07888 1374 aa3.79□□□□□ -1.8
UBP12YJL197W YLL066CQ99208 1374 aa3.79□□□□□ -1.8
UBP12YJL197W SIR3P06701 978 aa3.79□□□□□ -1.8
UBP12YJL197W PUT4P15380 627 aa3.79□□□□□ -1.8
UBP12YJL197W YSP3P25036 478 aa3.79□□□□□ -1.8
UBP12YJL197W PUP3P25451 205 aaKnown RBP3.79□□□□□ -1.8
UBP12YJL197W KAR4P25583 335 aa3.79□□□□□ -1.8
UBP12YJL197W MVD1P32377 396 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 82.2 ms