RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeast

Gene SEC28, Length 891 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC28	YIL076W	GUF1	P46943	645 aa		4.22	□□□□□ -1.73
SEC28	YIL076W	SOL4	P53315	255 aa		4.22	□□□□□ -1.73
SEC28	YIL076W	VID22	Q05934	901 aa		4.22	□□□□□ -1.73
SEC28	YIL076W	APL4	Q12028	832 aa		4.22	□□□□□ -1.73
SEC28	YIL076W	YBR085C-A	O43137	85 aa		4.21	□□□□□ -1.74
SEC28	YIL076W	SNF1	P06782	633 aa	Known RBP	4.21	□□□□□ -1.74
SEC28	YIL076W	PRO3	P32263	286 aa	Known RBP	4.21	□□□□□ -1.74
SEC28	YIL076W	YKL050C	P35736	922 aa		4.21	□□□□□ -1.74
SEC28	YIL076W	SPC34	P36131	295 aa		4.21	□□□□□ -1.74
SEC28	YIL076W	YER130C	P39959	443 aa		4.21	□□□□□ -1.74
SEC28	YIL076W	STR3	P53101	465 aa	Known RBP	4.21	□□□□□ -1.74
SEC28	YIL076W	IMP4	P53941	290 aa	Known RBP	4.21	□□□□□ -1.74
SEC28	YIL076W	RPB2	P08518	1224 aa	Known RBP	4.2	□□□□□ -1.74
SEC28	YIL076W	PTH2	P34222	208 aa		4.2	□□□□□ -1.74
SEC28	YIL076W	SNU114	P36048	1008 aa	Known RBP	4.2	□□□□□ -1.74
SEC28	YIL076W	ANS1	P38832	159 aa		4.2	□□□□□ -1.74
SEC28	YIL076W	KRE9	P39005	276 aa		4.2	□□□□□ -1.74
SEC28	YIL076W	UIP3	P39547	235 aa		4.2	□□□□□ -1.74
SEC28	YIL076W	YJL068C	P40363	299 aa		4.2	□□□□□ -1.74
SEC28	YIL076W	GTR1	Q00582	310 aa		4.2	□□□□□ -1.74
SEC28	YIL076W	PSR2	Q07949	397 aa		4.2	□□□□□ -1.74
SEC28	YIL076W	YBR298C-A	Q8TGK4	73 aa		4.2	□□□□□ -1.74
SEC28	YIL076W	MRP20	P32387	263 aa		4.19	□□□□□ -1.74
SEC28	YIL076W	PSY4	P38193	441 aa		4.19	□□□□□ -1.74
SEC28	YIL076W	RTS1	P38903	757 aa		4.19	□□□□□ -1.74
SEC28	YIL076W	DIM1	P41819	318 aa	Known RBP	4.19	□□□□□ -1.74
SEC28	YIL076W	TDA7	P53882	636 aa	Predicted RBP	4.19	□□□□□ -1.74
SEC28	YIL076W	ZDS2	P54786	942 aa		4.19	□□□□□ -1.74
SEC28	YIL076W	FMP45	Q07651	309 aa		4.19	□□□□□ -1.74
SEC28	YIL076W	SSM4	P40318	1319 aa		4.19	□□□□□ -1.74
SEC28	YIL076W	MRS3	P10566	314 aa		4.18	□□□□□ -1.74
SEC28	YIL076W	SNF3	P10870	884 aa		4.18	□□□□□ -1.74
SEC28	YIL076W	SPE2	P21182	396 aa		4.18	□□□□□ -1.74
SEC28	YIL076W	ALY1	P36117	915 aa		4.18	□□□□□ -1.74
SEC28	YIL076W	KTR3	P38130	404 aa	Predicted RBP	4.18	□□□□□ -1.74
SEC28	YIL076W	UBA4	P38820	440 aa		4.18	□□□□□ -1.74
SEC28	YIL076W	MUB1	Q03162	620 aa		4.18	□□□□□ -1.74
SEC28	YIL076W	RCO1	Q04779	684 aa		4.18	□□□□□ -1.74
SEC28	YIL076W	SKG3	Q06315	1026 aa		4.18	□□□□□ -1.74
SEC28	YIL076W	PRP16	P15938	1071 aa	Predicted RBP	4.17	□□□□□ -1.74
SEC28	YIL076W	ACH1	P32316	526 aa		4.17	□□□□□ -1.74
SEC28	YIL076W	DIA4	P38705	446 aa	Predicted RBP	4.17	□□□□□ -1.74
SEC28	YIL076W	RRP3	P38712	501 aa	Known RBP	4.17	□□□□□ -1.74
SEC28	YIL076W	BUR6	P40096	142 aa		4.17	□□□□□ -1.74
SEC28	YIL076W	FMP10	P40098	244 aa		4.17	□□□□□ -1.74
SEC28	YIL076W	SLZ1	P40167	298 aa		4.17	□□□□□ -1.74
SEC28	YIL076W	YJR008W	P47085	338 aa		4.17	□□□□□ -1.74
SEC28	YIL076W	RPS7B	P48164	190 aa	Known RBP	4.17	□□□□□ -1.74
SEC28	YIL076W	PIL1	P53252	339 aa	Known RBP	4.17	□□□□□ -1.74
SEC28	YIL076W	INA17	Q02888	182 aa		4.17	□□□□□ -1.74
SEC28	YIL076W	MSS11	Q03825	758 aa		4.17	□□□□□ -1.74
SEC28	YIL076W	YOX1	P34161	385 aa		4.16	□□□□□ -1.74
SEC28	YIL076W	AXL1	P40851	1208 aa		4.16	□□□□□ -1.74
SEC28	YIL076W	ROK1	P45818	564 aa	Predicted RBP	4.16	□□□□□ -1.74
SEC28	YIL076W	EMI2	Q04409	500 aa	Known RBP	4.16	□□□□□ -1.74
SEC28	YIL076W	PPT2	Q12036	173 aa		4.16	□□□□□ -1.74
SEC28	YIL076W	RPS10B	P46784	105 aa	Known RBP	4.15	□□□□□ -1.75
SEC28	YIL076W	INN1	P53901	409 aa		4.15	□□□□□ -1.75
SEC28	YIL076W	RBA50	Q04418	439 aa		4.15	□□□□□ -1.75
SEC28	YIL076W	SNO4	Q04902	237 aa		4.15	□□□□□ -1.75
SEC28	YIL076W	RPS10A	Q08745	105 aa	Predicted RBP	4.15	□□□□□ -1.75
SEC28	YIL076W	HSP33	Q08914	237 aa	Known RBP	4.15	□□□□□ -1.75
SEC28	YIL076W	HSP32	Q08992	237 aa		4.15	□□□□□ -1.75
SEC28	YIL076W	ARP6	Q12509	438 aa		4.15	□□□□□ -1.75
SEC28	YIL076W	CYB2	P00175	591 aa		4.14	□□□□□ -1.75
SEC28	YIL076W	PUT2	P07275	575 aa		4.14	□□□□□ -1.75
SEC28	YIL076W	TYR1	P20049	452 aa		4.14	□□□□□ -1.75
SEC28	YIL076W	CPR3	P25719	182 aa		4.14	□□□□□ -1.75
SEC28	YIL076W	MRS6	P32864	603 aa	Known RBP	4.14	□□□□□ -1.75
SEC28	YIL076W	SLC1	P33333	303 aa		4.14	□□□□□ -1.75
SEC28	YIL076W	YBR139W	P38109	508 aa		4.14	□□□□□ -1.75
SEC28	YIL076W	TSC10	P38342	320 aa		4.14	□□□□□ -1.75
SEC28	YIL076W	DBP8	P38719	431 aa		4.14	□□□□□ -1.75
SEC28	YIL076W	MDM31	P38880	579 aa		4.14	□□□□□ -1.75
SEC28	YIL076W	YHR218W	P38899	603 aa		4.14	□□□□□ -1.75
SEC28	YIL076W	AXL2	P38928	823 aa		4.14	□□□□□ -1.75
SEC28	YIL076W	YER010C	P40011	234 aa		4.14	□□□□□ -1.75
SEC28	YIL076W	IES5	P40060	125 aa		4.14	□□□□□ -1.75
SEC28	YIL076W	YJR061W	P40355	935 aa		4.14	□□□□□ -1.75
SEC28	YIL076W	TPM2	P40414	161 aa		4.14	□□□□□ -1.75
SEC28	YIL076W	SGM1	P47166	707 aa		4.14	□□□□□ -1.75
SEC28	YIL076W	YGR021W	P53212	290 aa		4.14	□□□□□ -1.75
SEC28	YIL076W	SSK1	Q07084	712 aa		4.14	□□□□□ -1.75
SEC28	YIL076W	PSR1	Q07800	427 aa		4.14	□□□□□ -1.75
SEC28	YIL076W	YEH2	Q07950	538 aa		4.14	□□□□□ -1.75
SEC28	YIL076W	ARG81	P05085	880 aa		4.13	□□□□□ -1.75
SEC28	YIL076W	SNC1	P31109	117 aa		4.13	□□□□□ -1.75
SEC28	YIL076W	PDB1	P32473	366 aa	Known RBP	4.13	□□□□□ -1.75
SEC28	YIL076W	ROT2	P38138	954 aa		4.13	□□□□□ -1.75
SEC28	YIL076W	SDS24	P38314	527 aa		4.13	□□□□□ -1.75
SEC28	YIL076W	ELO1	P39540	310 aa		4.13	□□□□□ -1.75
SEC28	YIL076W	IKS1	P47042	667 aa		4.13	□□□□□ -1.75
SEC28	YIL076W	PYK2	P52489	506 aa	Known RBP	4.13	□□□□□ -1.75
SEC28	YIL076W	DIC1	Q06143	298 aa		4.13	□□□□□ -1.75
SEC28	YIL076W	GRC3	Q07845	632 aa		4.13	□□□□□ -1.75
SEC28	YIL076W	NKP1	Q12493	238 aa		4.13	□□□□□ -1.75
SEC28	YIL076W	NOP1	P15646	327 aa	Known RBP	4.12	□□□□□ -1.75
SEC28	YIL076W	PWP1	P21304	576 aa	Known RBP	4.12	□□□□□ -1.75
SEC28	YIL076W	RPS2	P25443	254 aa	Known RBP	4.12	□□□□□ -1.75
SEC28	YIL076W	BUD14	P27637	709 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms