RNA–Protein interactions for RNA: YCR073C

SSK22, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeastyeast

Gene SSK22, Length 3,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK22YCR073C HRR25P29295 494 aaKnown RBP5.68□□□□□ -1.5
SSK22YCR073C NGG1P32494 702 aa5.68□□□□□ -1.5
SSK22YCR073C PRP19P32523 503 aaKnown RBP5.68□□□□□ -1.5
SSK22YCR073C MSN2P33748 704 aa5.68□□□□□ -1.5
SSK22YCR073C WHI3P34761 661 aaKnown RBP5.68□□□□□ -1.5
SSK22YCR073C ECM31P38122 312 aa5.68□□□□□ -1.5
SSK22YCR073C ATH1P48016 1211 aa5.68□□□□□ -1.5
SSK22YCR073C NAS6P50086 228 aa5.68□□□□□ -1.5
SSK22YCR073C STB4P50104 949 aa5.68□□□□□ -1.5
SSK22YCR073C GPI1P53306 609 aa5.68□□□□□ -1.5
SSK22YCR073C GCN5Q03330 439 aa5.68□□□□□ -1.5
SSK22YCR073C TAF11Q04226 346 aa5.68□□□□□ -1.5
SSK22YCR073C GMC2Q06201 188 aa5.68□□□□□ -1.5
SSK22YCR073C GPI11Q06636 219 aa5.68□□□□□ -1.5
SSK22YCR073C BSC1Q12140 328 aa5.68□□□□□ -1.5
SSK22YCR073C CMK1P27466 446 aaKnown RBP5.68□□□□□ -1.5
SSK22YCR073C PEX3P28795 441 aa5.68□□□□□ -1.5
SSK22YCR073C MCR1P36060 302 aaKnown RBP5.68□□□□□ -1.5
SSK22YCR073C MUP3P38734 546 aa5.68□□□□□ -1.5
SSK22YCR073C BZZ1P38822 633 aa5.68□□□□□ -1.5
SSK22YCR073C RPL34AP87262 121 aaPredicted RBP5.68□□□□□ -1.5
SSK22YCR073C REG1Q00816 1014 aa5.68□□□□□ -1.5
SSK22YCR073C YPR027CQ12079 277 aa5.68□□□□□ -1.5
SSK22YCR073C EMP46Q12396 444 aa5.68□□□□□ -1.5
SSK22YCR073C YLR149CQ99296 730 aa5.68□□□□□ -1.5
SSK22YCR073C CDC19P00549 500 aaKnown RBP5.68□□□□□ -1.5
SSK22YCR073C ASP3-2P0CX77 362 aa5.68□□□□□ -1.5
SSK22YCR073C ASP3-3P0CX78 362 aa5.68□□□□□ -1.5
SSK22YCR073C ASP3-4P0CX79 362 aa5.68□□□□□ -1.5
SSK22YCR073C ASP3-1P0CZ17 362 aa5.68□□□□□ -1.5
SSK22YCR073C RPL4AP10664 362 aaKnown RBP5.68□□□□□ -1.5
SSK22YCR073C PET100P38958 111 aa5.68□□□□□ -1.5
SSK22YCR073C AAD14P42884 376 aa5.68□□□□□ -1.5
SSK22YCR073C RPL4BP49626 362 aaKnown RBP5.68□□□□□ -1.5
SSK22YCR073C SLD3P53135 668 aa5.68□□□□□ -1.5
SSK22YCR073C YPL107WQ02873 248 aa5.68□□□□□ -1.5
SSK22YCR073C PEX10Q05568 337 aa5.68□□□□□ -1.5
SSK22YCR073C YGK3Q12222 375 aaPredicted RBP5.68□□□□□ -1.5
SSK22YCR073C ERP3Q12403 225 aa5.68□□□□□ -1.5
SSK22YCR073C BCY1P07278 416 aaKnown RBP5.67□□□□□ -1.5
SSK22YCR073C RPS4AP0CX35 261 aaKnown RBP5.67□□□□□ -1.5
SSK22YCR073C RPS4BP0CX36 261 aaKnown RBP5.67□□□□□ -1.5
SSK22YCR073C ATG22P25568 528 aa5.67□□□□□ -1.5
SSK22YCR073C RPS5P26783 225 aaKnown RBP5.67□□□□□ -1.5
SSK22YCR073C RPL34BP40525 121 aaKnown RBP5.67□□□□□ -1.5
SSK22YCR073C ELP2P42935 788 aa5.67□□□□□ -1.5
SSK22YCR073C SNG1P46950 547 aa5.67□□□□□ -1.5
SSK22YCR073C MDE1P47095 244 aa5.67□□□□□ -1.5
SSK22YCR073C MND1P53102 219 aa5.67□□□□□ -1.5
SSK22YCR073C YPR1Q12458 312 aa5.67□□□□□ -1.5
SSK22YCR073C GRX2P17695 143 aaKnown RBP5.67□□□□□ -1.5
SSK22YCR073C GIT1P25346 518 aa5.67□□□□□ -1.5
SSK22YCR073C TOM20P35180 183 aa5.67□□□□□ -1.5
SSK22YCR073C YER156CP40093 338 aaKnown RBP5.67□□□□□ -1.5
SSK22YCR073C BNI4P53858 892 aa5.67□□□□□ -1.5
SSK22YCR073C SLM2P53955 656 aa5.67□□□□□ -1.5
SSK22YCR073C BAG7Q12128 409 aa5.67□□□□□ -1.5
SSK22YCR073C ACF2Q12168 779 aa5.67□□□□□ -1.5
SSK22YCR073C RIB3Q99258 208 aa5.67□□□□□ -1.5
SSK22YCR073C FBA1P14540 359 aaKnown RBP5.67□□□□□ -1.5
SSK22YCR073C CHA1P25379 360 aaKnown RBP5.67□□□□□ -1.5
SSK22YCR073C HEM3P28789 327 aa5.67□□□□□ -1.5
SSK22YCR073C LST4P34239 828 aa5.67□□□□□ -1.5
SSK22YCR073C ATG19P35193 415 aa5.67□□□□□ -1.5
SSK22YCR073C SPC42P36094 363 aa5.67□□□□□ -1.5
SSK22YCR073C XDJ1P39102 459 aa5.67□□□□□ -1.5
SSK22YCR073C FAR7P43592 221 aa5.67□□□□□ -1.5
SSK22YCR073C IRC6P43615 237 aa5.67□□□□□ -1.5
SSK22YCR073C ARC35P53731 342 aaKnown RBP5.67□□□□□ -1.5
SSK22YCR073C DSL1P53847 754 aa5.67□□□□□ -1.5
SSK22YCR073C CBC2Q08920 208 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
SSK22YCR073C PST2Q12335 198 aaKnown RBP5.67□□□□□ -1.5
SSK22YCR073C YBL028CP38202 106 aa5.66□□□□□ -1.5
SSK22YCR073C STP2P38704 541 aa5.66□□□□□ -1.5
SSK22YCR073C RIM4P38741 713 aa5.66□□□□□ -1.5
SSK22YCR073C ATM1P40416 690 aa5.66□□□□□ -1.5
SSK22YCR073C SCS3P53012 380 aa5.66□□□□□ -1.5
SSK22YCR073C ISU1Q03020 165 aa5.66□□□□□ -1.5
SSK22YCR073C SUB2Q07478 446 aaKnown RBP5.66□□□□□ -1.5
SSK22YCR073C DTD1Q07648 150 aaKnown RBP5.66□□□□□ -1.5
SSK22YCR073C NRT1Q08485 598 aa5.66□□□□□ -1.5
SSK22YCR073C NSL1Q12143 216 aa5.66□□□□□ -1.5
SSK22YCR073C VPS13Q07878 3144 aa5.66□□□□□ -1.5
SSK22YCR073C BAR1P12630 587 aa5.66□□□□□ -1.5
SSK22YCR073C ERG6P25087 383 aaKnown RBP5.66□□□□□ -1.5
SSK22YCR073C ARN2P38724 620 aa5.66□□□□□ -1.5
SSK22YCR073C JLP2P40206 208 aa5.66□□□□□ -1.5
SSK22YCR073C EFM3P47163 339 aa5.66□□□□□ -1.5
SSK22YCR073C GCV2P49095 1034 aa5.66□□□□□ -1.5
SSK22YCR073C TBF1Q02457 562 aa5.66□□□□□ -1.5
SSK22YCR073C RTT10Q08924 1013 aa5.66□□□□□ -1.5
SSK22YCR073C YOL159C-AQ3E769 90 aa5.66□□□□□ -1.5
SSK22YCR073C YBR298C-AQ8TGK4 73 aa5.66□□□□□ -1.5
SSK22YCR073C HMG1P12683 1054 aa5.66□□□□□ -1.5
SSK22YCR073C CIN8P27895 1000 aa5.66□□□□□ -1.5
SSK22YCR073C YBL029WP38201 376 aa5.66□□□□□ -1.5
SSK22YCR073C IFA38P38286 347 aa5.66□□□□□ -1.5
SSK22YCR073C YIL055CP40523 627 aaKnown RBP5.66□□□□□ -1.5
SSK22YCR073C DIE2P50076 525 aa5.66□□□□□ -1.5
SSK22YCR073C ARO10Q06408 635 aa5.66□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 88.5 ms