RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 SKILP12757 684 aa5.79□□□□□ -1.48
SSX9-202ENST00000608568 IGHMBP2P38935 993 aaKnown RBP5.79□□□□□ -1.48
SSX9-202ENST00000608568 ZNF157P51786 506 aaPredicted RBP5.79□□□□□ -1.48
SSX9-202ENST00000608568 TYRO3Q06418 890 aa5.79□□□□□ -1.48
SSX9-202ENST00000608568 NOGQ13253 232 aa5.79□□□□□ -1.48
SSX9-202ENST00000608568 PRKG1Q13976 671 aa5.79□□□□□ -1.48
SSX9-202ENST00000608568 TSGA10IPQ3SY00 556 aa5.79□□□□□ -1.48
SSX9-202ENST00000608568 STRIP1Q5VSL9 837 aa5.79□□□□□ -1.48
SSX9-202ENST00000608568 CC2D1AQ6P1N0 951 aaPredicted RBP5.79□□□□□ -1.48
SSX9-202ENST00000608568 PODNQ7Z5L7 613 aa5.79□□□□□ -1.48
SSX9-202ENST00000608568 RPAP2Q8IXW5 612 aaPredicted RBP5.79□□□□□ -1.48
SSX9-202ENST00000608568 MICALL1Q8N3F8 863 aa5.79□□□□□ -1.48
SSX9-202ENST00000608568 TMEM57Q8N5G2 664 aa5.79□□□□□ -1.48
SSX9-202ENST00000608568 MRPL50Q8N5N7 158 aaKnown RBP5.79□□□□□ -1.48
SSX9-202ENST00000608568 SPC24Q8NBT2 197 aa5.79□□□□□ -1.48
SSX9-202ENST00000608568 FAM71BQ8TC56 605 aa5.79□□□□□ -1.48
SSX9-202ENST00000608568 CLMNQ96JQ2 1002 aa5.79□□□□□ -1.48
SSX9-202ENST00000608568 TRERF1Q96PN7 1200 aa5.79□□□□□ -1.48
SSX9-202ENST00000608568 CSRNP1Q96S65 589 aa5.79□□□□□ -1.48
SSX9-202ENST00000608568 NUP62CLQ9H1M0 184 aa5.79□□□□□ -1.48
SSX9-202ENST00000608568 GNL3LQ9NVN8 582 aaKnown RBP5.79□□□□□ -1.48
SSX9-202ENST00000608568 RNF186Q9NXI6 227 aa5.79□□□□□ -1.48
SSX9-202ENST00000608568 TFIP11Q9UBB9 837 aaKnown RBP5.79□□□□□ -1.48
SSX9-202ENST00000608568 MCM3APO60318 1980 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 ANKRD18BA2A2Z9 1011 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 CCDC85CA6NKD9 419 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 GOLGA6L19H0YKK7 550 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 AP5Z1O43299 807 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 MYO1BO43795 1136 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 GADD45BO75293 160 aaPredicted RBP5.78□□□□□ -1.48
SSX9-202ENST00000608568 TADA3O75528 432 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 TRPA1O75762 1119 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 ERLIN2O94905 339 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 TBC1D8O95759 1140 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 F13A1P00488 732 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 GSPT1P15170 499 aaKnown RBP5.78□□□□□ -1.48
SSX9-202ENST00000608568 GYG1P46976 350 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 LMAN1P49257 510 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 NEK4P51957 841 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 MRPL12P52815 198 aaKnown RBP5.78□□□□□ -1.48
SSX9-202ENST00000608568 FOSBP53539 338 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 ETF1P62495 437 aaKnown RBP5.78□□□□□ -1.48
SSX9-202ENST00000608568 PTPN12Q05209 780 aaKnown RBP5.78□□□□□ -1.48
SSX9-202ENST00000608568 DGKZQ13574 1117 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 ERCC6LQ2NKX8 1250 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 LRRC24Q50LG9 513 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 SLC4A10Q6U841 1118 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 GBP6Q6ZN66 633 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 HDXQ7Z353 690 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 CCDC50Q8IVM0 306 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 TEX11Q8IYF3 940 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 VGLL2Q8N8G2 317 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 C2orf69Q8N8R5 385 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 CTCFLQ8NI51 663 aaPredicted RBP5.78□□□□□ -1.48
SSX9-202ENST00000608568 RNF217Q8TC41 542 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 BICD2Q8TD16 824 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 MAGEC3Q8TD91 643 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 CACTINQ8WUQ7 758 aaKnown RBP5.78□□□□□ -1.48
SSX9-202ENST00000608568 TCP11Q8WWU5 503 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 SSH1Q8WYL5 1049 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 ZNF592Q92610 1267 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 ZSCAN31Q96LW9 406 aaPredicted RBP5.78□□□□□ -1.48
SSX9-202ENST00000608568 API5Q9BZZ5 524 aaKnown RBP5.78□□□□□ -1.48
SSX9-202ENST00000608568 SCAND2PQ9GZW5 306 aaPredicted RBP5.78□□□□□ -1.48
SSX9-202ENST00000608568 COA1Q9GZY4 146 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 BICC1Q9H694 974 aaKnown RBP5.78□□□□□ -1.48
SSX9-202ENST00000608568 VIPAS39Q9H9C1 493 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 LCMT1Q9UIC8 334 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 NOB1Q9ULX3 412 aaKnown RBP5.78□□□□□ -1.48
SSX9-202ENST00000608568 IQSEC3Q9UPP2 1182 aaPredicted RBP5.78□□□□□ -1.48
SSX9-202ENST00000608568 TNNQ9UQP3 1299 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 LEMD3Q9Y2U8 911 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 PCDHGA4Q9Y5G9 962 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 MRVI1Q9Y6F6 885 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 RLFQ13129 1914 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 MYH4Q9Y623 1939 aa5.78□□□□□ -1.48
SSX9-202ENST00000608568 UTYO14607 1347 aa5.77□□□□□ -1.49
SSX9-202ENST00000608568 PLXNA1Q9UIW2 1896 aa5.77□□□□□ -1.49
SSX9-202ENST00000608568 A0A1B0GUA9 196 aa5.77□□□□□ -1.49
SSX9-202ENST00000608568 CHUKO15111 745 aa5.77□□□□□ -1.49
SSX9-202ENST00000608568 POLR3GO15318 223 aaPredicted RBP5.77□□□□□ -1.49
SSX9-202ENST00000608568 ZSCAN12O43309 604 aa5.77□□□□□ -1.49
SSX9-202ENST00000608568 STX6O43752 255 aa5.77□□□□□ -1.49
SSX9-202ENST00000608568 IPO7O95373 1038 aaKnown RBP5.77□□□□□ -1.49
SSX9-202ENST00000608568 IL1R1P14778 569 aa5.77□□□□□ -1.49
SSX9-202ENST00000608568 GCFC2P16383 781 aaKnown RBP5.77□□□□□ -1.49
SSX9-202ENST00000608568 PDCP20941 246 aa5.77□□□□□ -1.49
SSX9-202ENST00000608568 MCM3P25205 808 aa5.77□□□□□ -1.49
SSX9-202ENST00000608568 RDXP35241 583 aaKnown RBP5.77□□□□□ -1.49
SSX9-202ENST00000608568 SOX11P35716 441 aa5.77□□□□□ -1.49
SSX9-202ENST00000608568 USP5P45974 858 aa5.77□□□□□ -1.49
SSX9-202ENST00000608568 RFX5P48382 616 aaPredicted RBP5.77□□□□□ -1.49
SSX9-202ENST00000608568 MNAT1P51948 309 aa5.77□□□□□ -1.49
SSX9-202ENST00000608568 GYS2P54840 703 aa5.77□□□□□ -1.49
SSX9-202ENST00000608568 SOX10P56693 466 aa5.77□□□□□ -1.49
SSX9-202ENST00000608568 KRT85P78386 507 aa5.77□□□□□ -1.49
SSX9-202ENST00000608568 VAC14Q08AM6 782 aa5.77□□□□□ -1.49
SSX9-202ENST00000608568 TRAF1Q13077 416 aa5.77□□□□□ -1.49
SSX9-202ENST00000608568 IFIT5Q13325 482 aaKnown RBP5.77□□□□□ -1.49
SSX9-202ENST00000608568 NAA30Q147X3 362 aaPredicted RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms