RNA–Protein interactions for RNA: ENST00000547201.5

USP25-209, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 2

Gene USP25, Length 757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-209ENST00000547201 ATP11AP98196 1134 aa7.01□□□□□ -1.29
USP25-209ENST00000547201 PRPF40BQ6NWY9 871 aaKnown RBP7.01□□□□□ -1.29
USP25-209ENST00000547201 ATF7IPQ6VMQ6 1270 aa7.01□□□□□ -1.29
USP25-209ENST00000547201 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.01□□□□□ -1.29
USP25-209ENST00000547201 LINS1Q8NG48 757 aa7.01□□□□□ -1.29
USP25-209ENST00000547201 BICC1Q9H694 974 aaKnown RBP7.01□□□□□ -1.29
USP25-209ENST00000547201 ZNF652Q9Y2D9 606 aa7.01□□□□□ -1.29
USP25-209ENST00000547201 CHD4Q14839 1912 aa7.01□□□□□ -1.29
USP25-209ENST00000547201 PTPRCP08575 1304 aa7.01□□□□□ -1.29
USP25-209ENST00000547201 SH3TC1Q8TE82 1336 aa7.01□□□□□ -1.29
USP25-209ENST00000547201 KIF16BQ96L93 1317 aa7.01□□□□□ -1.29
USP25-209ENST00000547201 LINC01387J3KSC0 135 aa7□□□□□ -1.29
USP25-209ENST00000547201 GRM8O00222 908 aa7□□□□□ -1.29
USP25-209ENST00000547201 SCNN1AP37088 669 aa7□□□□□ -1.29
USP25-209ENST00000547201 RFX5P48382 616 aaPredicted RBP7□□□□□ -1.29
USP25-209ENST00000547201 NAA30Q147X3 362 aaPredicted RBP7□□□□□ -1.29
USP25-209ENST00000547201 PARP10Q53GL7 1025 aa7□□□□□ -1.29
USP25-209ENST00000547201 COL13A1Q5TAT6 717 aaPredicted RBP7□□□□□ -1.29
USP25-209ENST00000547201 TTC39BQ5VTQ0 682 aaPredicted RBP7□□□□□ -1.29
USP25-209ENST00000547201 CEP135Q66GS9 1140 aa7□□□□□ -1.29
USP25-209ENST00000547201 CAPN12Q6ZSI9 719 aa7□□□□□ -1.29
USP25-209ENST00000547201 ZBTB38Q8NAP3 1195 aaPredicted RBP7□□□□□ -1.29
USP25-209ENST00000547201 CCDC191Q8NCU4 936 aa7□□□□□ -1.29
USP25-209ENST00000547201 GALNT11Q8NCW6 608 aa7□□□□□ -1.29
USP25-209ENST00000547201 ZNF622Q969S3 477 aaKnown RBP eCLIP7□□□□□ -1.294e-6■□□□□ 9.7
USP25-209ENST00000547201 CRBNQ96SW2 442 aa7□□□□□ -1.29
USP25-209ENST00000547201 PUS3Q9BZE2 481 aaKnown RBP7□□□□□ -1.29
USP25-209ENST00000547201 LACRTQ9GZZ8 138 aa7□□□□□ -1.29
USP25-209ENST00000547201 PCMTD2Q9NV79 361 aa7□□□□□ -1.29
USP25-209ENST00000547201 PA2G4Q9UQ80 394 aaKnown RBP7□□□□□ -1.29
USP25-209ENST00000547201 CD2APQ9Y5K6 639 aa7□□□□□ -1.29
USP25-209ENST00000547201 LRRFIP2Q9Y608 721 aaKnown RBP7□□□□□ -1.29
USP25-209ENST00000547201 ARAP2Q8WZ64 1704 aa7□□□□□ -1.29
USP25-209ENST00000547201 UTYO14607 1347 aa7□□□□□ -1.29
USP25-209ENST00000547201 RNF123Q5XPI4 1314 aa7□□□□□ -1.29
USP25-209ENST00000547201 CDHR2Q9BYE9 1310 aa7□□□□□ -1.29
USP25-209ENST00000547201 COL1A1P02452 1464 aaPredicted RBP6.99□□□□□ -1.29
USP25-209ENST00000547201 PNMA6EA0A0J9YXQ4 647 aa6.99□□□□□ -1.29
USP25-209ENST00000547201 GSC2O15499 205 aa6.99□□□□□ -1.29
USP25-209ENST00000547201 DDX58O95786 925 aaKnown RBP6.99□□□□□ -1.29
USP25-209ENST00000547201 CT47B1P0C2W7 299 aaPredicted RBP6.99□□□□□ -1.29
USP25-209ENST00000547201 CDC27P30260 824 aa6.99□□□□□ -1.29
USP25-209ENST00000547201 ST5P78524 1137 aa6.99□□□□□ -1.29
USP25-209ENST00000547201 SLC10A5Q5PT55 438 aa6.99□□□□□ -1.29
USP25-209ENST00000547201 INTS3Q68E01 1043 aaKnown RBP6.99□□□□□ -1.29
USP25-209ENST00000547201 TXNDC11Q6PKC3 985 aa6.99□□□□□ -1.29
USP25-209ENST00000547201 SIRT2Q8IXJ6 389 aa6.99□□□□□ -1.29
USP25-209ENST00000547201 TTLL11Q8NHH1 800 aa6.99□□□□□ -1.29
USP25-209ENST00000547201 GPR152Q8TDT2 470 aa6.99□□□□□ -1.29
USP25-209ENST00000547201 BRIP1Q9BX63 1249 aa6.99□□□□□ -1.29
USP25-209ENST00000547201 SRCIN1Q9C0H9 1055 aa6.99□□□□□ -1.29
USP25-209ENST00000547201 ABI2Q9NYB9 513 aaPredicted RBP6.99□□□□□ -1.29
USP25-209ENST00000547201 STIM2Q9P246 746 aa6.99□□□□□ -1.29
USP25-209ENST00000547201 RAXQ9Y2V3 346 aa6.99□□□□□ -1.29
USP25-209ENST00000547201 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.98□□□□□ -1.29
USP25-209ENST00000547201 KIF4AO95239 1232 aa6.98□□□□□ -1.29
USP25-209ENST00000547201 ATG7O95352 703 aa6.98□□□□□ -1.29
USP25-209ENST00000547201 SSTR4P31391 388 aa6.98□□□□□ -1.29
USP25-209ENST00000547201 CD68P34810 354 aaPredicted RBP6.98□□□□□ -1.29
USP25-209ENST00000547201 LRRC24Q50LG9 513 aa6.98□□□□□ -1.29
USP25-209ENST00000547201 HSP90AB3PQ58FF7 597 aa6.98□□□□□ -1.29
USP25-209ENST00000547201 TMEM164Q5U3C3 297 aa6.98□□□□□ -1.29
USP25-209ENST00000547201 ZKSCAN2Q63HK3 967 aa6.98□□□□□ -1.29
USP25-209ENST00000547201 LMBR1LQ6UX01 489 aa6.98□□□□□ -1.29
USP25-209ENST00000547201 ACAD11Q709F0 780 aa6.98□□□□□ -1.29
USP25-209ENST00000547201 PPP1R42Q7Z4L9 355 aa6.98□□□□□ -1.29
USP25-209ENST00000547201 SKAP1Q86WV1 359 aa6.98□□□□□ -1.29
USP25-209ENST00000547201 ITPRIPQ8IWB1 547 aa6.98□□□□□ -1.29
USP25-209ENST00000547201 CEP41Q9BYV8 373 aa6.98□□□□□ -1.29
USP25-209ENST00000547201 RASSF4Q9H2L5 321 aa6.98□□□□□ -1.29
USP25-209ENST00000547201 SUPT16HQ9Y5B9 1047 aaKnown RBP6.98□□□□□ -1.29
USP25-209ENST00000547201 IRS2Q9Y4H2 1338 aa6.98□□□□□ -1.29
USP25-209ENST00000547201 DICER1Q9UPY3 1922 aaKnown RBP6.97□□□□□ -1.29
USP25-209ENST00000547201 NPHP1O15259 732 aa6.97□□□□□ -1.29
USP25-209ENST00000547201 DHX15O43143 795 aaKnown RBP6.97□□□□□ -1.29
USP25-209ENST00000547201 ALDH1L1O75891 902 aa6.97□□□□□ -1.29
USP25-209ENST00000547201 WISP1O95388 367 aa6.97□□□□□ -1.29
USP25-209ENST00000547201 HOXA10P31260 410 aaPredicted RBP6.97□□□□□ -1.29
USP25-209ENST00000547201 GPSM2P81274 684 aa6.97□□□□□ -1.29
USP25-209ENST00000547201 RABL6Q3YEC7 729 aaPredicted RBP6.97□□□□□ -1.29
USP25-209ENST00000547201 FAM117BQ6P1L5 589 aa6.97□□□□□ -1.29
USP25-209ENST00000547201 TPTE2Q6XPS3 522 aa6.97□□□□□ -1.29
USP25-209ENST00000547201 NPM2Q86SE8 214 aaKnown RBP6.97□□□□□ -1.29
USP25-209ENST00000547201 EXOC6Q8TAG9 804 aa6.97□□□□□ -1.29
USP25-209ENST00000547201 CLP1Q92989 425 aaKnown RBP6.97□□□□□ -1.29
USP25-209ENST00000547201 UBL7Q96S82 380 aaPredicted RBP6.97□□□□□ -1.29
USP25-209ENST00000547201 PLA2G12BQ9BX93 195 aa6.97□□□□□ -1.29
USP25-209ENST00000547201 API5Q9BZZ5 524 aaKnown RBP6.97□□□□□ -1.29
USP25-209ENST00000547201 STOML1Q9UBI4 398 aa6.97□□□□□ -1.29
USP25-209ENST00000547201 ZNF541Q9H0D2 1346 aa6.97□□□□□ -1.29
USP25-209ENST00000547201 PSME4Q14997 1843 aa6.97□□□□□ -1.29
USP25-209ENST00000547201 SHTN1A0MZ66 631 aa6.96□□□□□ -1.3
USP25-209ENST00000547201 PDE8AO60658 829 aa6.96□□□□□ -1.3
USP25-209ENST00000547201 TAF5LO75529 589 aa6.96□□□□□ -1.3
USP25-209ENST00000547201 IGLV1-40P01703 118 aa6.96□□□□□ -1.3
USP25-209ENST00000547201 CSF1RP07333 972 aa6.96□□□□□ -1.3
USP25-209ENST00000547201 NPR1P16066 1061 aa6.96□□□□□ -1.3
USP25-209ENST00000547201 CDC25BP30305 580 aa6.96□□□□□ -1.3
USP25-209ENST00000547201 CD97P48960 835 aa6.96□□□□□ -1.3
USP25-209ENST00000547201 TGFB2P61812 414 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms