RNA–Protein interactions for RNA: YPR008W

HAA1, Transcript of Transcriptional activator involved in adaptation to weak acid stress, yeast

Gene HAA1, Length 2,085 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HAA1	YPR008W	VPS41	P38959	992 aa		3.03	□□□□□ -1.92
HAA1	YPR008W	BUD16	P39988	312 aa		3.03	□□□□□ -1.92
HAA1	YPR008W	QRI7	P43122	407 aa		3.03	□□□□□ -1.92
HAA1	YPR008W	EIS1	Q05050	843 aa	Known RBP	3.03	□□□□□ -1.92
HAA1	YPR008W	THI3	Q07471	609 aa		3.03	□□□□□ -1.92
HAA1	YPR008W	RRI1	Q12468	440 aa		3.03	□□□□□ -1.92
HAA1	YPR008W	ILV2	P07342	687 aa	Known RBP	3.02	□□□□□ -1.93
HAA1	YPR008W	PDE1	P22434	369 aa		3.02	□□□□□ -1.93
HAA1	YPR008W	RIT1	P23796	513 aa		3.02	□□□□□ -1.93
HAA1	YPR008W	URK1	P27515	501 aa		3.02	□□□□□ -1.93
HAA1	YPR008W	PFF1	P38244	976 aa		3.02	□□□□□ -1.93
HAA1	YPR008W	OSH3	P38713	996 aa	Known RBP	3.02	□□□□□ -1.93
HAA1	YPR008W	SPC72	P39723	622 aa		3.02	□□□□□ -1.93
HAA1	YPR008W	TEP1	P53916	434 aa		3.02	□□□□□ -1.93
HAA1	YPR008W	AAT1	Q01802	451 aa		3.02	□□□□□ -1.93
HAA1	YPR008W	MRPL1	Q04599	285 aa		3.02	□□□□□ -1.93
HAA1	YPR008W	STP3	Q05937	343 aa		3.02	□□□□□ -1.93
HAA1	YPR008W	ATX2	Q12067	313 aa		3.02	□□□□□ -1.93
HAA1	YPR008W	LSP1	Q12230	341 aa	Known RBP	3.02	□□□□□ -1.93
HAA1	YPR008W	RRI2	Q12348	645 aa		3.02	□□□□□ -1.93
HAA1	YPR008W	GAL1	P04385	528 aa		3.02	□□□□□ -1.93
HAA1	YPR008W	MSS18	P08593	268 aa		3.02	□□□□□ -1.93
HAA1	YPR008W	RNR2	P09938	399 aa	Known RBP	3.02	□□□□□ -1.93
HAA1	YPR008W	SST2	P11972	698 aa	Known RBP	3.02	□□□□□ -1.93
HAA1	YPR008W	POL3	P15436	1097 aa		3.02	□□□□□ -1.93
HAA1	YPR008W	TPM1	P17536	199 aa	Known RBP	3.02	□□□□□ -1.93
HAA1	YPR008W	OPI1	P21957	404 aa		3.02	□□□□□ -1.93
HAA1	YPR008W	MCM3	P24279	971 aa	Known RBP	3.02	□□□□□ -1.93
HAA1	YPR008W	KRE2	P27809	442 aa		3.02	□□□□□ -1.93
HAA1	YPR008W	LAC1	P28496	418 aa		3.02	□□□□□ -1.93
HAA1	YPR008W	SMY1	P32364	656 aa	Known RBP	3.02	□□□□□ -1.93
HAA1	YPR008W	ATO2	P32907	282 aa		3.02	□□□□□ -1.93
HAA1	YPR008W	HES1	P35843	434 aa		3.02	□□□□□ -1.93
HAA1	YPR008W	ARN1	P38731	627 aa		3.02	□□□□□ -1.93
HAA1	YPR008W	YMR147W	P40218	223 aa	Known RBP	3.02	□□□□□ -1.93
HAA1	YPR008W	YIL152W	P40455	235 aa		3.02	□□□□□ -1.93
HAA1	YPR008W	ORC5	P50874	479 aa		3.02	□□□□□ -1.93
HAA1	YPR008W	SNA4	Q07549	140 aa		3.02	□□□□□ -1.93
HAA1	YPR008W	RPL42A	P0CX27	106 aa	Known RBP	3.01	□□□□□ -1.93
HAA1	YPR008W	RPL42B	P0CX28	106 aa	Known RBP	3.01	□□□□□ -1.93
HAA1	YPR008W	VPS24	P36095	224 aa	Known RBP	3.01	□□□□□ -1.93
HAA1	YPR008W	APM3	P38153	483 aa		3.01	□□□□□ -1.93
HAA1	YPR008W	SPO22	P40511	975 aa		3.01	□□□□□ -1.93
HAA1	YPR008W	MDV1	P47025	714 aa		3.01	□□□□□ -1.93
HAA1	YPR008W	YPT11	P48559	417 aa		3.01	□□□□□ -1.93
HAA1	YPR008W	EAF7	P53911	425 aa	Known RBP	3.01	□□□□□ -1.93
HAA1	YPR008W	MET14	Q02196	202 aa		3.01	□□□□□ -1.93
HAA1	YPR008W	ECM22	Q05958	814 aa	Predicted RBP	3.01	□□□□□ -1.93
HAA1	YPR008W	SRL1	Q08673	210 aa		3.01	□□□□□ -1.93
HAA1	YPR008W	ROX1	P25042	368 aa		3	□□□□□ -1.93
HAA1	YPR008W	LCB1	P25045	558 aa	Known RBP	3	□□□□□ -1.93
HAA1	YPR008W	CAB2	P40506	365 aa		3	□□□□□ -1.93
HAA1	YPR008W	STB2	P46679	850 aa		3	□□□□□ -1.93
HAA1	YPR008W	ERO1	Q03103	563 aa		3	□□□□□ -1.93
HAA1	YPR008W	VPS20	Q04272	221 aa		3	□□□□□ -1.93
HAA1	YPR008W	TMA7	Q3E764	64 aa	Known RBP	3	□□□□□ -1.93
HAA1	YPR008W	YER145C-A	A0A023PYF4	145 aa		3	□□□□□ -1.93
HAA1	YPR008W	CYB2	P00175	591 aa		3	□□□□□ -1.93
HAA1	YPR008W	YSP3	P25036	478 aa		3	□□□□□ -1.93
HAA1	YPR008W	YCR043C	P25361	127 aa		3	□□□□□ -1.93
HAA1	YPR008W	ARP2	P32381	391 aa	Known RBP	3	□□□□□ -1.93
HAA1	YPR008W	YBR138C	P38277	524 aa		3	□□□□□ -1.93
HAA1	YPR008W	HIS6	P40545	261 aa		3	□□□□□ -1.93
HAA1	YPR008W	DJP1	P40564	432 aa		3	□□□□□ -1.93
HAA1	YPR008W	YGL036W	P53185	909 aa	Predicted RBP	3	□□□□□ -1.93
HAA1	YPR008W	RPT4	P53549	437 aa	Known RBP	3	□□□□□ -1.93
HAA1	YPR008W	LSC1	P53598	329 aa	Known RBP	3	□□□□□ -1.93
HAA1	YPR008W	IRC4	Q03036	179 aa		3	□□□□□ -1.93
HAA1	YPR008W	IWR1	Q07532	353 aa	Predicted RBP	3	□□□□□ -1.93
HAA1	YPR008W	PEP3	P27801	918 aa		2.99	□□□□□ -1.93
HAA1	YPR008W	MSP1	P28737	362 aa		2.99	□□□□□ -1.93
HAA1	YPR008W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	2.99	□□□□□ -1.93	not detected
HAA1	YPR008W	GRX7	P38068	203 aa		2.99	□□□□□ -1.93
HAA1	YPR008W	TOM71	P38825	639 aa	Known RBP	2.99	□□□□□ -1.93
HAA1	YPR008W	YIR016W	P40572	265 aa		2.99	□□□□□ -1.93
HAA1	YPR008W	MSY1	P48527	492 aa		2.99	□□□□□ -1.93
HAA1	YPR008W	YDR109C	Q04585	715 aa		2.99	□□□□□ -1.93
HAA1	YPR008W	YMR034C	Q05131	434 aa	Predicted RBP	2.99	□□□□□ -1.93
HAA1	YPR008W	INM2	Q05533	292 aa		2.99	□□□□□ -1.93
HAA1	YPR008W	TAH18	Q12181	623 aa		2.99	□□□□□ -1.93
HAA1	YPR008W	PMD1	P32634	1753 aa		2.99	□□□□□ -1.93
HAA1	YPR008W	RPL19A	P0CX82	189 aa	Known RBP	2.99	□□□□□ -1.93
HAA1	YPR008W	RPL19B	P0CX83	189 aa	Predicted RBP	2.99	□□□□□ -1.93
HAA1	YPR008W	YFL068W	P0CX99	160 aa		2.99	□□□□□ -1.93
HAA1	YPR008W	YLL066W-A	P0CY00	160 aa		2.99	□□□□□ -1.93
HAA1	YPR008W	YLL067W-A	P0CY01	160 aa		2.99	□□□□□ -1.93
HAA1	YPR008W	RFA2	P26754	273 aa	Known RBP	2.99	□□□□□ -1.93
HAA1	YPR008W	GEX2	P36173	615 aa		2.99	□□□□□ -1.93
HAA1	YPR008W	YFH7	P43591	353 aa		2.99	□□□□□ -1.93
HAA1	YPR008W	EAF6	P47128	113 aa		2.99	□□□□□ -1.93
HAA1	YPR008W	CPR6	P53691	371 aa	Known RBP	2.99	□□□□□ -1.93
HAA1	YPR008W	VTC3	Q02725	835 aa		2.99	□□□□□ -1.93
HAA1	YPR008W	UBX2	Q04228	584 aa		2.99	□□□□□ -1.93
HAA1	YPR008W	GTB1	Q04924	702 aa		2.99	□□□□□ -1.93
HAA1	YPR008W	PDR8	Q06149	701 aa		2.99	□□□□□ -1.93
HAA1	YPR008W	PGA3	Q12746	312 aa	Known RBP	2.99	□□□□□ -1.93
HAA1	YPR008W	FIG2	P25653	1609 aa		2.98	□□□□□ -1.93
HAA1	YPR008W	DUR1,2	P32528	1835 aa	Known RBP	2.98	□□□□□ -1.93
HAA1	YPR008W	TOM1	Q03280	3268 aa		2.98	□□□□□ -1.93
HAA1	YPR008W	SNF3	P10870	884 aa		2.98	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms