RNA–Protein interactions for RNA: YPL230W

USV1, Transcript of Putative transcription factor containing a C2H2 zinc finger, yeast

Gene USV1, Length 1,176 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
USV1	YPL230W	YML037C	Q03703	340 aa		4.08	□□□□□ -1.76
USV1	YPL230W	SXM1	Q04175	944 aa	Known RBP	4.08	□□□□□ -1.76
USV1	YPL230W	PLM2	Q04383	521 aa		4.08	□□□□□ -1.76
USV1	YPL230W	GFD1	Q04839	188 aa	Known RBP	4.08	□□□□□ -1.76
USV1	YPL230W	AHA1	Q12449	350 aa	Known RBP	4.08	□□□□□ -1.76
USV1	YPL230W	SEC3	P33332	1336 aa	Known RBP	4.07	□□□□□ -1.76
USV1	YPL230W	HSP82	P02829	709 aa	Known RBP	4.07	□□□□□ -1.76
USV1	YPL230W	SES1	P07284	462 aa	Known RBP	4.07	□□□□□ -1.76
USV1	YPL230W	HOM3	P10869	527 aa		4.07	□□□□□ -1.76
USV1	YPL230W	SRP54	P20424	541 aa	Known RBP	4.07	□□□□□ -1.76
USV1	YPL230W	CDC15	P27636	974 aa		4.07	□□□□□ -1.76
USV1	YPL230W	AUR1	P36107	401 aa	Predicted RBP	4.07	□□□□□ -1.76
USV1	YPL230W	YEL057C	P39983	233 aa		4.07	□□□□□ -1.76
USV1	YPL230W	RGI2	P40188	164 aa		4.07	□□□□□ -1.76
USV1	YPL230W	RSC1	P53236	928 aa		4.07	□□□□□ -1.76
USV1	YPL230W	AAT1	Q01802	451 aa		4.07	□□□□□ -1.76
USV1	YPL230W	YPL068C	Q02749	293 aa		4.07	□□□□□ -1.76
USV1	YPL230W	GEP3	Q08622	556 aa		4.07	□□□□□ -1.76
USV1	YPL230W	YPL191C	Q08930	360 aa		4.07	□□□□□ -1.76
USV1	YPL230W	GET3	Q12154	354 aa	Known RBP	4.07	□□□□□ -1.76
USV1	YPL230W	RPL7A	P05737	244 aa	Known RBP	4.06	□□□□□ -1.76
USV1	YPL230W	OPI1	P21957	404 aa		4.06	□□□□□ -1.76
USV1	YPL230W	OCA4	P25366	362 aa		4.06	□□□□□ -1.76
USV1	YPL230W	BYE1	P36106	594 aa		4.06	□□□□□ -1.76
USV1	YPL230W	UTP9	P38882	575 aa	Known RBP	4.06	□□□□□ -1.76
USV1	YPL230W	GPD2	P41911	440 aa	Known RBP	4.06	□□□□□ -1.76
USV1	YPL230W	RPS7B	P48164	190 aa	Known RBP	4.06	□□□□□ -1.76
USV1	YPL230W	YML6	P51998	286 aa		4.06	□□□□□ -1.76
USV1	YPL230W	INA17	Q02888	182 aa		4.06	□□□□□ -1.76
USV1	YPL230W	YMR155W	Q03795	547 aa		4.06	□□□□□ -1.76
USV1	YPL230W	YLR352W	Q06479	807 aa		4.06	□□□□□ -1.76
USV1	YPL230W	RPL7B	Q12213	244 aa	Known RBP	4.06	□□□□□ -1.76
USV1	YPL230W	SFI1	Q12369	946 aa		4.06	□□□□□ -1.76
USV1	YPL230W	RTN2	Q12443	393 aa		4.06	□□□□□ -1.76
USV1	YPL230W	RTC1	Q08281	1341 aa		4.05	□□□□□ -1.76
USV1	YPL230W	PMA2	P19657	947 aa		4.05	□□□□□ -1.76
USV1	YPL230W	LCB1	P25045	558 aa	Known RBP	4.05	□□□□□ -1.76
USV1	YPL230W	RPC53	P25441	422 aa		4.05	□□□□□ -1.76
USV1	YPL230W	YJU2	P28320	278 aa	Predicted RBP	4.05	□□□□□ -1.76
USV1	YPL230W	SWI3	P32591	825 aa		4.05	□□□□□ -1.76
USV1	YPL230W	VMA8	P32610	256 aa	Known RBP	4.05	□□□□□ -1.76
USV1	YPL230W	RPS0A	P32905	252 aa	Known RBP	4.05	□□□□□ -1.76
USV1	YPL230W	AAP1	P37898	856 aa	Known RBP	4.05	□□□□□ -1.76
USV1	YPL230W	MNN2	P38069	597 aa		4.05	□□□□□ -1.76
USV1	YPL230W	REG2	P38232	338 aa		4.05	□□□□□ -1.76
USV1	YPL230W	CCT6	P39079	546 aa		4.05	□□□□□ -1.76
USV1	YPL230W	LSM5	P40089	93 aa	Known RBP	4.05	□□□□□ -1.76
USV1	YPL230W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
USV1	YPL230W	DCP2	P53550	970 aa	Known RBP	4.05	□□□□□ -1.76
USV1	YPL230W	RCF1	Q03713	159 aa		4.05	□□□□□ -1.76
USV1	YPL230W	ARG7	Q04728	441 aa		4.05	□□□□□ -1.76
USV1	YPL230W	PSR1	Q07800	427 aa		4.05	□□□□□ -1.76
USV1	YPL230W	YEH1	Q07804	573 aa		4.05	□□□□□ -1.76
USV1	YPL230W	BUD7	Q08754	746 aa		4.05	□□□□□ -1.76
USV1	YPL230W	YPL272C	Q08984	517 aa		4.05	□□□□□ -1.76
USV1	YPL230W	ARD1	P07347	238 aa	Predicted RBP	4.04	□□□□□ -1.76
USV1	YPL230W	PWP1	P21304	576 aa	Known RBP	4.04	□□□□□ -1.76
USV1	YPL230W	PDB1	P32473	366 aa	Known RBP	4.04	□□□□□ -1.76
USV1	YPL230W	SEC31	P38968	1273 aa	Known RBP	4.04	□□□□□ -1.76
USV1	YPL230W	DOT5	P40553	215 aa		4.04	□□□□□ -1.76
USV1	YPL230W	AXL1	P40851	1208 aa		4.04	□□□□□ -1.76
USV1	YPL230W	MAF1	P41910	395 aa		4.04	□□□□□ -1.76
USV1	YPL230W	CTK2	P46962	323 aa		4.04	□□□□□ -1.76
USV1	YPL230W	RSM28	Q03430	361 aa		4.04	□□□□□ -1.76
USV1	YPL230W	IRC3	Q06683	689 aa		4.04	□□□□□ -1.76
USV1	YPL230W	CYK3	Q07533	885 aa		4.04	□□□□□ -1.76
USV1	YPL230W	YJR112W-A	Q3E743	109 aa		4.04	□□□□□ -1.76
USV1	YPL230W	YPT6	Q99260	215 aa		4.04	□□□□□ -1.76
USV1	YPL230W	ILV2	P07342	687 aa	Known RBP	4.03	□□□□□ -1.76
USV1	YPL230W	YIH1	P25637	258 aa		4.03	□□□□□ -1.76
USV1	YPL230W	PXA2	P34230	853 aa		4.03	□□□□□ -1.76
USV1	YPL230W	KES1	P35844	434 aa	Known RBP	4.03	□□□□□ -1.76
USV1	YPL230W	ADE17	P38009	592 aa	Known RBP	4.03	□□□□□ -1.76
USV1	YPL230W	AGP2	P38090	596 aa		4.03	□□□□□ -1.76
USV1	YPL230W	YNG2	P38806	282 aa	Known RBP	4.03	□□□□□ -1.76
USV1	YPL230W	AFG3	P39925	761 aa		4.03	□□□□□ -1.76
USV1	YPL230W	ECM10	P39987	644 aa		4.03	□□□□□ -1.76
USV1	YPL230W	PHM8	P40025	321 aa		4.03	□□□□□ -1.76
USV1	YPL230W	BUR6	P40096	142 aa		4.03	□□□□□ -1.76
USV1	YPL230W	MET28	P40573	187 aa		4.03	□□□□□ -1.76
USV1	YPL230W	TDA10	P42938	290 aa		4.03	□□□□□ -1.76
USV1	YPL230W	STR3	P53101	465 aa	Known RBP	4.03	□□□□□ -1.76
USV1	YPL230W	LEA1	Q08963	238 aa	Predicted RBP	4.03	□□□□□ -1.76
USV1	YPL230W	GRX6	Q12438	231 aa		4.03	□□□□□ -1.76
USV1	YPL230W	PET111	P08468	800 aa		4.02	□□□□□ -1.77
USV1	YPL230W	PDX1	P16451	410 aa		4.02	□□□□□ -1.77
USV1	YPL230W	VMA16	P23968	213 aa		4.02	□□□□□ -1.77
USV1	YPL230W	AAD3	P25612	363 aa		4.02	□□□□□ -1.77
USV1	YPL230W	PTC6	P25646	442 aa		4.02	□□□□□ -1.77
USV1	YPL230W	GPI10	P30777	616 aa		4.02	□□□□□ -1.77
USV1	YPL230W	GSH1	P32477	678 aa		4.02	□□□□□ -1.77
USV1	YPL230W	SOF1	P33750	489 aa	Known RBP	4.02	□□□□□ -1.77
USV1	YPL230W	LHS1	P36016	881 aa		4.02	□□□□□ -1.77
USV1	YPL230W	MET18	P40469	1032 aa		4.02	□□□□□ -1.77
USV1	YPL230W	OPT1	P40897	799 aa		4.02	□□□□□ -1.77
USV1	YPL230W	YFR020W	P43600	232 aa		4.02	□□□□□ -1.77
USV1	YPL230W	BUD22	Q04347	519 aa	Known RBP	4.02	□□□□□ -1.77
USV1	YPL230W	RAD34	Q06665	692 aa		4.02	□□□□□ -1.77
USV1	YPL230W	ATG9	Q12142	997 aa		4.02	□□□□□ -1.77
USV1	YPL230W	YOL159C-A	Q3E769	90 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 69.3 ms