RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeastyeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GDE1YPL110C YGR273CP53329 174 aa4.48□□□□□ -1.69
GDE1YPL110C GSF2Q04697 403 aaKnown RBP4.48□□□□□ -1.69
GDE1YPL110C SPH1Q06160 661 aa4.48□□□□□ -1.69
GDE1YPL110C BRE4Q07660 1125 aa4.48□□□□□ -1.69
GDE1YPL110C YPR063CQ12160 140 aa4.48□□□□□ -1.69
GDE1YPL110C URA3P03962 267 aa4.48□□□□□ -1.69
GDE1YPL110C POL30P15873 258 aaKnown RBP4.48□□□□□ -1.69
GDE1YPL110C RNR3P21672 869 aaKnown RBP4.48□□□□□ -1.69
GDE1YPL110C BUD31P25337 157 aaPredicted RBP4.48□□□□□ -1.69
GDE1YPL110C MKK2P32491 506 aa4.48□□□□□ -1.69
GDE1YPL110C SCT1P32784 759 aa4.48□□□□□ -1.69
GDE1YPL110C PCH2P38126 564 aa4.48□□□□□ -1.69
GDE1YPL110C TSC10P38342 320 aa4.48□□□□□ -1.69
GDE1YPL110C QNS1P38795 714 aaKnown RBP4.48□□□□□ -1.69
GDE1YPL110C GPP2P40106 250 aaKnown RBP4.48□□□□□ -1.69
GDE1YPL110C PDS1P40316 373 aaPredicted RBP4.48□□□□□ -1.69
GDE1YPL110C VMA13P41807 478 aaKnown RBP4.48□□□□□ -1.69
GDE1YPL110C RTA1P53047 317 aa4.48□□□□□ -1.69
GDE1YPL110C YGR250CP53316 781 aaKnown RBP4.48□□□□□ -1.69
GDE1YPL110C YMR279CQ03263 540 aa4.48□□□□□ -1.69
GDE1YPL110C ESA1Q08649 445 aa4.48□□□□□ -1.69
GDE1YPL110C NTO1Q12311 748 aa4.48□□□□□ -1.69
GDE1YPL110C YHR213W-AQ8TGT4 77 aa4.48□□□□□ -1.69
GDE1YPL110C TRK1P12685 1235 aa4.48□□□□□ -1.69
GDE1YPL110C CMK2P22517 447 aa4.48□□□□□ -1.69
GDE1YPL110C DBP2P24783 546 aaKnown RBP4.48□□□□□ -1.69
GDE1YPL110C TAF14P35189 244 aa4.48□□□□□ -1.69
GDE1YPL110C STB6P36085 766 aa4.48□□□□□ -1.69
GDE1YPL110C YHL041WP38730 149 aa4.48□□□□□ -1.69
GDE1YPL110C FAA3P39002 694 aa4.48□□□□□ -1.69
GDE1YPL110C SLM1P40485 686 aa4.48□□□□□ -1.69
GDE1YPL110C CIT3P43635 486 aa4.48□□□□□ -1.69
GDE1YPL110C NET1P47035 1189 aa4.48□□□□□ -1.69
GDE1YPL110C RPS7BP48164 190 aaKnown RBP4.48□□□□□ -1.69
GDE1YPL110C UPF3P48412 387 aaKnown RBP4.48□□□□□ -1.69
GDE1YPL110C RMR1P53060 241 aa4.48□□□□□ -1.69
GDE1YPL110C SNF12P53628 566 aa4.48□□□□□ -1.69
GDE1YPL110C YDR239CQ03780 787 aa4.48□□□□□ -1.69
GDE1YPL110C BDS1Q08347 646 aa4.48□□□□□ -1.69
GDE1YPL110C SAM3Q08986 587 aa4.48□□□□□ -1.69
GDE1YPL110C TY3A-GQ12173 290 aa4.48□□□□□ -1.69
GDE1YPL110C DCN1Q12395 269 aa4.48□□□□□ -1.69
GDE1YPL110C PNS1Q12412 539 aa4.48□□□□□ -1.69
GDE1YPL110C APM4Q99186 491 aa4.48□□□□□ -1.69
GDE1YPL110C TY3A-IQ99219 290 aa4.48□□□□□ -1.69
GDE1YPL110C GAL4P04386 881 aa4.47□□□□□ -1.69
GDE1YPL110C PMA1P05030 918 aaKnown RBP4.47□□□□□ -1.69
GDE1YPL110C CDC23P16522 626 aa4.47□□□□□ -1.69
GDE1YPL110C TPO5P36029 618 aa4.47□□□□□ -1.69
GDE1YPL110C ERG10P41338 398 aaKnown RBP4.47□□□□□ -1.69
GDE1YPL110C FMP32P43557 207 aa4.47□□□□□ -1.69
GDE1YPL110C NPY1P53164 384 aa4.47□□□□□ -1.69
GDE1YPL110C YNL040WP53960 456 aaPredicted RBP4.47□□□□□ -1.69
GDE1YPL110C HFD1Q04458 532 aa4.47□□□□□ -1.69
GDE1YPL110C CRR1Q05790 422 aa4.47□□□□□ -1.69
GDE1YPL110C KAP95Q06142 861 aaKnown RBP4.47□□□□□ -1.69
GDE1YPL110C PSR2Q07949 397 aa4.47□□□□□ -1.69
GDE1YPL110C CUE5Q08412 411 aaKnown RBP4.47□□□□□ -1.69
GDE1YPL110C RCN2Q12044 265 aa4.47□□□□□ -1.69
GDE1YPL110C YDL206WQ12424 762 aa4.47□□□□□ -1.69
GDE1YPL110C PHO5P00635 467 aa4.47□□□□□ -1.69
GDE1YPL110C GYP6P32806 458 aa4.47□□□□□ -1.69
GDE1YPL110C GRE3P38715 327 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
GDE1YPL110C MNL1P38888 796 aa4.47□□□□□ -1.69
GDE1YPL110C CCT7P42943 550 aaKnown RBP4.47□□□□□ -1.69
GDE1YPL110C SWP82P43554 623 aa4.47□□□□□ -1.69
GDE1YPL110C LOC1P43586 204 aaPredicted RBP4.47□□□□□ -1.69
GDE1YPL110C YFR018CP43599 363 aa4.47□□□□□ -1.69
GDE1YPL110C YGR042WP53227 271 aa4.47□□□□□ -1.69
GDE1YPL110C PRM1P53835 661 aa4.47□□□□□ -1.69
GDE1YPL110C TMA20P89886 181 aaPredicted RBP4.47□□□□□ -1.69
GDE1YPL110C MMT1Q03218 510 aa4.47□□□□□ -1.69
GDE1YPL110C RAD30Q04049 632 aa4.47□□□□□ -1.69
GDE1YPL110C YLR345WQ06137 509 aa4.47□□□□□ -1.69
GDE1YPL110C SPE3Q12074 293 aaKnown RBP4.47□□□□□ -1.69
GDE1YPL110C DGK1Q12382 290 aa4.47□□□□□ -1.69
GDE1YPL110C CCP1P00431 361 aa4.47□□□□□ -1.69
GDE1YPL110C PET54P10834 293 aa4.47□□□□□ -1.69
GDE1YPL110C MTF2P10849 440 aa4.47□□□□□ -1.69
GDE1YPL110C COX11P19516 300 aaKnown RBP4.47□□□□□ -1.69
GDE1YPL110C ISF1P32488 338 aa4.47□□□□□ -1.69
GDE1YPL110C PET127P32606 800 aa4.47□□□□□ -1.69
GDE1YPL110C YKL133CP36066 463 aa4.47□□□□□ -1.69
GDE1YPL110C PRS2P38620 318 aaKnown RBP4.47□□□□□ -1.69
GDE1YPL110C HRB1P38922 454 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
GDE1YPL110C FLC2P39719 783 aa4.47□□□□□ -1.69
GDE1YPL110C ERV46P39727 415 aa4.47□□□□□ -1.69
GDE1YPL110C VHR1P40522 640 aa4.47□□□□□ -1.69
GDE1YPL110C ORC3P54790 616 aa4.47□□□□□ -1.69
GDE1YPL110C TDA5Q06417 326 aaKnown RBP4.47□□□□□ -1.69
GDE1YPL110C THI73Q07904 523 aa4.47□□□□□ -1.69
GDE1YPL110C YDL176WQ12027 708 aa4.47□□□□□ -1.69
GDE1YPL110C SCEIP03882 235 aa4.46□□□□□ -1.7
GDE1YPL110C RPP1AP05318 106 aaPredicted RBP4.46□□□□□ -1.7
GDE1YPL110C CBP3P21560 335 aa4.46□□□□□ -1.7
GDE1YPL110C CTR86P25355 563 aa4.46□□□□□ -1.7
GDE1YPL110C DAL1P32375 460 aa4.46□□□□□ -1.7
GDE1YPL110C PRP40P33203 583 aaKnown RBP4.46□□□□□ -1.7
GDE1YPL110C NIC96P34077 839 aa4.46□□□□□ -1.7
GDE1YPL110C CTF13P35203 478 aa4.46□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms