RNA–Protein interactions for RNA: YMR088C

VBA1, Transcript of Permease of basic amino acids in the vacuolar membrane, yeastyeast

Gene VBA1, Length 1,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA1YMR088C BCH1Q05029 724 aa5.52□□□□□ -1.53
VBA1YMR088C YAP7Q08182 245 aa5.52□□□□□ -1.53
VBA1YMR088C GPN2Q08726 347 aaPredicted RBP5.52□□□□□ -1.53
VBA1YMR088C YPL272CQ08984 517 aa5.52□□□□□ -1.53
VBA1YMR088C TAF10Q12030 206 aa5.52□□□□□ -1.53
VBA1YMR088C NUR1Q12066 484 aa5.52□□□□□ -1.53
VBA1YMR088C PUS9Q12069 462 aa5.52□□□□□ -1.53
VBA1YMR088C NTO1Q12311 748 aa5.52□□□□□ -1.53
VBA1YMR088C MDM20Q12387 796 aaKnown RBP5.52□□□□□ -1.53
VBA1YMR088C GIS3Q12418 502 aa5.52□□□□□ -1.53
VBA1YMR088C APM4Q99186 491 aa5.52□□□□□ -1.53
VBA1YMR088C MTR10Q99189 972 aa5.52□□□□□ -1.53
VBA1YMR088C YLR278CQ05854 1341 aa5.52□□□□□ -1.53
VBA1YMR088C GCN4P03069 281 aa5.51□□□□□ -1.53
VBA1YMR088C RPP1AP05318 106 aaPredicted RBP5.51□□□□□ -1.53
VBA1YMR088C CHO2P05374 869 aaKnown RBP5.51□□□□□ -1.53
VBA1YMR088C LEU4P06208 619 aaKnown RBP5.51□□□□□ -1.53
VBA1YMR088C CMD1P06787 147 aaKnown RBP5.51□□□□□ -1.53
VBA1YMR088C KGD1P20967 1014 aaKnown RBP5.51□□□□□ -1.53
VBA1YMR088C MNE1P24720 663 aa5.51□□□□□ -1.53
VBA1YMR088C GYP6P32806 458 aa5.51□□□□□ -1.53
VBA1YMR088C RPT5P33297 434 aaKnown RBP5.51□□□□□ -1.53
VBA1YMR088C MUD2P36084 527 aaKnown RBP5.51□□□□□ -1.53
VBA1YMR088C AKL1P38080 1108 aaKnown RBP5.51□□□□□ -1.53
VBA1YMR088C RFT1P38206 574 aaPredicted RBP5.51□□□□□ -1.53
VBA1YMR088C IMD2P38697 523 aaKnown RBP5.51□□□□□ -1.53
VBA1YMR088C YHL017WP38745 532 aa5.51□□□□□ -1.53
VBA1YMR088C SOP4P39543 234 aaPredicted RBP5.51□□□□□ -1.53
VBA1YMR088C TPA1P40032 644 aaKnown RBP5.51□□□□□ -1.53
VBA1YMR088C YJL068CP40363 299 aa5.51□□□□□ -1.53
VBA1YMR088C PAC11P40960 533 aa5.51□□□□□ -1.53
VBA1YMR088C TDA10P42938 290 aa5.51□□□□□ -1.53
VBA1YMR088C NPA3P47122 385 aa5.51□□□□□ -1.53
VBA1YMR088C PMT3P47190 753 aa5.51□□□□□ -1.53
VBA1YMR088C DAM1P53267 343 aa5.51□□□□□ -1.53
VBA1YMR088C BOP3P53958 396 aa5.51□□□□□ -1.53
VBA1YMR088C YPR147CQ06522 304 aaKnown RBP5.51□□□□□ -1.53
VBA1YMR088C YOL019WQ08157 551 aa5.51□□□□□ -1.53
VBA1YMR088C TRE2Q08693 809 aa5.51□□□□□ -1.53
VBA1YMR088C LDB17Q12342 491 aa5.51□□□□□ -1.53
VBA1YMR088C PAR32Q12515 295 aaKnown RBP5.51□□□□□ -1.53
VBA1YMR088C RRP12Q12754 1228 aaKnown RBP5.51□□□□□ -1.53
VBA1YMR088C HAP1P0CE41 1502 aa5.5□□□□□ -1.53
VBA1YMR088C ATP6P00854 259 aa5.5□□□□□ -1.53
VBA1YMR088C RPP0P05317 312 aaKnown RBP5.5□□□□□ -1.53
VBA1YMR088C APA1P16550 321 aaKnown RBP5.5□□□□□ -1.53
VBA1YMR088C MSN1P22148 382 aa5.5□□□□□ -1.53
VBA1YMR088C RIT1P23796 513 aa5.5□□□□□ -1.53
VBA1YMR088C ADP1P25371 1049 aa5.5□□□□□ -1.53
VBA1YMR088C CMK1P27466 446 aaKnown RBP5.5□□□□□ -1.53
VBA1YMR088C LAS1P36146 502 aaPredicted RBP5.5□□□□□ -1.53
VBA1YMR088C KTR4P38131 464 aa5.5□□□□□ -1.53
VBA1YMR088C RFS1P38234 210 aaKnown RBP5.5□□□□□ -1.53
VBA1YMR088C YBR238CP38330 731 aaKnown RBP5.5□□□□□ -1.53
VBA1YMR088C GDI1P39958 451 aaKnown RBP5.5□□□□□ -1.53
VBA1YMR088C VAB2P40003 282 aa5.5□□□□□ -1.53
VBA1YMR088C MMF1P40185 145 aaKnown RBP5.5□□□□□ -1.53
VBA1YMR088C GID8P40208 455 aa5.5□□□□□ -1.53
VBA1YMR088C SOK1P40317 901 aa5.5□□□□□ -1.53
VBA1YMR088C CCT5P40413 562 aaKnown RBP5.5□□□□□ -1.53
VBA1YMR088C ERG10P41338 398 aaKnown RBP5.5□□□□□ -1.53
VBA1YMR088C RPS7BP48164 190 aaKnown RBP5.5□□□□□ -1.53
VBA1YMR088C SEH1P53011 349 aaKnown RBP5.5□□□□□ -1.53
VBA1YMR088C RPL6AQ02326 176 aaKnown RBP5.5□□□□□ -1.53
VBA1YMR088C MMT1Q03218 510 aa5.5□□□□□ -1.53
VBA1YMR088C RMD1Q03441 430 aa5.5□□□□□ -1.53
VBA1YMR088C SEG1Q04279 960 aa5.5□□□□□ -1.53
VBA1YMR088C VBA4Q04602 768 aaKnown RBP5.5□□□□□ -1.53
VBA1YMR088C MHR1Q06630 226 aa5.5□□□□□ -1.53
VBA1YMR088C YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.5□□□□□ -1.53not detected
VBA1YMR088C AIM41Q12032 185 aa5.5□□□□□ -1.53
VBA1YMR088C HFI1Q12060 488 aa5.5□□□□□ -1.53
VBA1YMR088C LEU9Q12166 604 aaKnown RBP5.5□□□□□ -1.53
VBA1YMR088C FRE6Q12473 712 aa5.5□□□□□ -1.53
VBA1YMR088C SKS1Q12505 502 aa5.5□□□□□ -1.53
VBA1YMR088C DNA2P38859 1522 aa5.5□□□□□ -1.53
VBA1YMR088C POL30P15873 258 aaKnown RBP5.5□□□□□ -1.53
VBA1YMR088C RNR1P21524 888 aaKnown RBP5.5□□□□□ -1.53
VBA1YMR088C DAL7P21826 554 aa5.5□□□□□ -1.53
VBA1YMR088C CLB2P24869 491 aa5.5□□□□□ -1.53
VBA1YMR088C BOS1P25385 244 aa5.5□□□□□ -1.53
VBA1YMR088C IMG1P25626 169 aa5.5□□□□□ -1.53
VBA1YMR088C SUA5P32579 426 aa5.5□□□□□ -1.53
VBA1YMR088C YBR071WP38243 211 aa5.5□□□□□ -1.53
VBA1YMR088C YBR287WP38355 427 aa5.5□□□□□ -1.53
VBA1YMR088C YDR089WP38966 869 aa5.5□□□□□ -1.53
VBA1YMR088C FHL1P39521 936 aa5.5□□□□□ -1.53
VBA1YMR088C RGD2P43556 714 aa5.5□□□□□ -1.53
VBA1YMR088C NET1P47035 1189 aa5.5□□□□□ -1.53
VBA1YMR088C ASK10P48361 1146 aa5.5□□□□□ -1.53
VBA1YMR088C MSE1P48525 536 aa5.5□□□□□ -1.53
VBA1YMR088C HFM1P51979 1187 aa5.5□□□□□ -1.53
VBA1YMR088C NSA1P53136 463 aaPredicted RBP5.5□□□□□ -1.53
VBA1YMR088C ERP6P53198 216 aa5.5□□□□□ -1.53
VBA1YMR088C VAC7P53950 1165 aa5.5□□□□□ -1.53
VBA1YMR088C ORC3P54790 616 aa5.5□□□□□ -1.53
VBA1YMR088C CDC55Q00362 526 aa5.5□□□□□ -1.53
VBA1YMR088C CWC27Q02770 301 aa5.5□□□□□ -1.53
VBA1YMR088C YPL107WQ02873 248 aa5.5□□□□□ -1.53
VBA1YMR088C NHP10Q03435 203 aa5.5□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms