RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CBF5	YLR175W	EFM6	P53970	246 aa		4.59	□□□□□ -1.67
CBF5	YLR175W	ORC3	P54790	616 aa		4.59	□□□□□ -1.67
CBF5	YLR175W	ADE12	P80210	433 aa	Known RBP	4.59	□□□□□ -1.67
CBF5	YLR175W	YML119W	Q03208	357 aa		4.59	□□□□□ -1.67
CBF5	YLR175W	BUD22	Q04347	519 aa	Known RBP	4.59	□□□□□ -1.67
CBF5	YLR175W	YDR109C	Q04585	715 aa		4.59	□□□□□ -1.67
CBF5	YLR175W	ADY3	Q07732	790 aa		4.59	□□□□□ -1.67
CBF5	YLR175W	DAP1	Q12091	152 aa		4.59	□□□□□ -1.67
CBF5	YLR175W	SCH9	P11792	824 aa	Known RBP	4.58	□□□□□ -1.68
CBF5	YLR175W	SST2	P11972	698 aa	Known RBP	4.58	□□□□□ -1.68
CBF5	YLR175W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
CBF5	YLR175W	FPR1	P20081	114 aa	Known RBP	4.58	□□□□□ -1.68
CBF5	YLR175W	DAL81	P21657	970 aa		4.58	□□□□□ -1.68
CBF5	YLR175W	SIR1	P21691	654 aa		4.58	□□□□□ -1.68
CBF5	YLR175W	AMD2	P22580	549 aa		4.58	□□□□□ -1.68
CBF5	YLR175W	AEP1	P32493	518 aa		4.58	□□□□□ -1.68
CBF5	YLR175W	LIP5	P32875	414 aa		4.58	□□□□□ -1.68
CBF5	YLR175W	COY1	P34237	679 aa		4.58	□□□□□ -1.68
CBF5	YLR175W	SQT1	P35184	431 aa		4.58	□□□□□ -1.68
CBF5	YLR175W	CTF13	P35203	478 aa		4.58	□□□□□ -1.68
CBF5	YLR175W	ALY1	P36117	915 aa		4.58	□□□□□ -1.68
CBF5	YLR175W	YHR131C	P38835	850 aa		4.58	□□□□□ -1.68
CBF5	YLR175W	VPS41	P38959	992 aa		4.58	□□□□□ -1.68
CBF5	YLR175W	ERG10	P41338	398 aa	Known RBP	4.58	□□□□□ -1.68
CBF5	YLR175W	PEX8	P53248	589 aa		4.58	□□□□□ -1.68
CBF5	YLR175W	BUD32	P53323	261 aa		4.58	□□□□□ -1.68
CBF5	YLR175W	PRM1	P53835	661 aa		4.58	□□□□□ -1.68
CBF5	YLR175W	IMP4	P53941	290 aa	Known RBP	4.58	□□□□□ -1.68
CBF5	YLR175W	NUP100	Q02629	959 aa		4.58	□□□□□ -1.68
CBF5	YLR175W	TFB2	Q02939	513 aa		4.58	□□□□□ -1.68
CBF5	YLR175W	YPL109C	Q02981	657 aa		4.58	□□□□□ -1.68
CBF5	YLR175W	PIR1	Q03178	341 aa		4.58	□□□□□ -1.68
CBF5	YLR175W	TRS31	Q03337	283 aa		4.58	□□□□□ -1.68
CBF5	YLR175W	PEX15	Q08215	383 aa		4.58	□□□□□ -1.68
CBF5	YLR175W	MPD2	Q99316	277 aa		4.58	□□□□□ -1.68
CBF5	YLR175W	HIS5	P07172	385 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	RIP-Chip
CBF5	YLR175W	BET2	P20133	325 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	MNE1	P24720	663 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	EMC1	P25574	760 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	IMG2	P25642	146 aa	Predicted RBP	4.57	□□□□□ -1.68
CBF5	YLR175W	MCM5	P29496	775 aa	Known RBP	4.57	□□□□□ -1.68
CBF5	YLR175W	GDA1	P32621	518 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	CYM1	P32898	989 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	SWE1	P32944	819 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	TFA2	P36145	328 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	MAK5	P38112	773 aa	Predicted RBP	4.57	□□□□□ -1.68
CBF5	YLR175W	YHI9	P38765	294 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	LIN1	P38852	340 aa	Predicted RBP	4.57	□□□□□ -1.68
CBF5	YLR175W	PEP8	P40335	379 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	CHS6	P40955	746 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	TDA10	P42938	290 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	PYK2	P52489	506 aa	Known RBP	4.57	□□□□□ -1.68
CBF5	YLR175W	SAP4	P53036	818 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	COG1	P53079	417 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	MON1	P53129	644 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	SCW11	P53189	542 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	TIM13	P53299	105 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	BIO4	P53630	237 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	YNR065C	P53751	1116 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	SFB2	P53953	876 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	MRS2	Q01926	470 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	SPP2	Q02521	185 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	PET117	Q02771	107 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	TAF11	Q04226	346 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	GSF2	Q04697	403 aa	Known RBP	4.57	□□□□□ -1.68
CBF5	YLR175W	YLR177W	Q06251	628 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	SYT1	Q06836	1226 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	YLR053C	Q12026	108 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	TY1A-BL	Q12266	440 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	RMD5	Q12508	421 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	YOR338W	Q99326	363 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	CCH1	P50077	2039 aa		4.57	□□□□□ -1.68
CBF5	YLR175W	HSF1	P10961	833 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	NIP1	P32497	812 aa	Known RBP	4.56	□□□□□ -1.68
CBF5	YLR175W	IMP3	P32899	183 aa	Predicted RBP	4.56	□□□□□ -1.68
CBF5	YLR175W	YKL097C	P34245	136 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	TOM20	P35180	183 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	YSW1	P38280	609 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	MEF2	P39677	819 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	RGI2	P40188	164 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	OSW5	P40219	148 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	PAN2	P53010	1115 aa	Predicted RBP	4.56	□□□□□ -1.68
CBF5	YLR175W	CWC24	P53769	259 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	NAM8	Q00539	523 aa	Known RBP	4.56	□□□□□ -1.68
CBF5	YLR175W	YDR132C	Q03900	495 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	YHM2	Q04013	314 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	YPR114W	Q06107	315 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	LCB5	Q06147	687 aa	Known RBP	4.56	□□□□□ -1.68
CBF5	YLR175W	MCP2	Q06567	569 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	NSE1	Q07913	336 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	PER33	Q12144	273 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	SPE4	Q12455	300 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	RGS2	Q99188	309 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	YLR149C	Q99296	730 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	FAB1	P34756	2278 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	UBR1	P19812	1950 aa		4.56	□□□□□ -1.68
CBF5	YLR175W	RPS14A	P06367	137 aa	Known RBP	4.56	□□□□□ -1.68
CBF5	YLR175W	ERG20	P08524	352 aa	Known RBP	4.56	□□□□□ -1.68
CBF5	YLR175W	PMA2	P19657	947 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 78.7 ms