RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C ARD1P07347 238 aaPredicted RBP2.07□□□□□ -2.08
RTT101YJL047C RPS4AP0CX35 261 aaKnown RBP2.07□□□□□ -2.08
RTT101YJL047C RPS4BP0CX36 261 aaKnown RBP2.07□□□□□ -2.08
RTT101YJL047C HMX1P32339 317 aa2.07□□□□□ -2.08
RTT101YJL047C ASF2P32448 525 aaPredicted RBP2.07□□□□□ -2.08
RTT101YJL047C DPH5P32469 300 aaPredicted RBP2.07□□□□□ -2.08
RTT101YJL047C DOA4P32571 926 aa2.07□□□□□ -2.08
RTT101YJL047C RML2P32611 393 aa2.07□□□□□ -2.08
RTT101YJL047C YME2P32843 850 aa2.07□□□□□ -2.08
RTT101YJL047C WBP1P33767 430 aaKnown RBP2.07□□□□□ -2.08
RTT101YJL047C CMC1P36064 111 aa2.07□□□□□ -2.08
RTT101YJL047C GLY1P37303 387 aaKnown RBP2.07□□□□□ -2.08
RTT101YJL047C CCL1P37366 393 aa2.07□□□□□ -2.08
RTT101YJL047C TAT1P38085 619 aa2.07□□□□□ -2.08
RTT101YJL047C RRM3P38766 723 aa2.07□□□□□ -2.08
RTT101YJL047C PEX18P38855 283 aa2.07□□□□□ -2.08
RTT101YJL047C AIM10P39965 576 aaKnown RBP2.07□□□□□ -2.08
RTT101YJL047C ALD5P40047 520 aaKnown RBP2.07□□□□□ -2.08
RTT101YJL047C ALG5P40350 334 aa2.07□□□□□ -2.08
RTT101YJL047C SDP1P40479 209 aa2.07□□□□□ -2.08
RTT101YJL047C HXT14P42833 540 aa2.07□□□□□ -2.08
RTT101YJL047C CTR1P49573 406 aa2.07□□□□□ -2.08
RTT101YJL047C PRP31P49704 494 aaPredicted RBP2.07□□□□□ -2.08
RTT101YJL047C PAN2P53010 1115 aaPredicted RBP2.07□□□□□ -2.08
RTT101YJL047C DCP2P53550 970 aaKnown RBP2.07□□□□□ -2.08
RTT101YJL047C ADE12P80210 433 aaKnown RBP2.07□□□□□ -2.08
RTT101YJL047C YPL108WQ02872 168 aaPredicted RBP2.07□□□□□ -2.08
RTT101YJL047C HOF1Q05080 669 aa2.07□□□□□ -2.08
RTT101YJL047C CUR1Q06469 252 aa2.07□□□□□ -2.08
RTT101YJL047C GPN2Q08726 347 aaPredicted RBP2.07□□□□□ -2.08
RTT101YJL047C RLM1Q12224 676 aa2.07□□□□□ -2.08
RTT101YJL047C HIP1P06775 603 aa2.07□□□□□ -2.08
RTT101YJL047C GCD1P09032 578 aaPredicted RBP2.07□□□□□ -2.08
RTT101YJL047C YML003WP0CF16 290 aa2.07□□□□□ -2.08
RTT101YJL047C TAL1P15019 335 aaKnown RBP2.07□□□□□ -2.08
RTT101YJL047C CDC42P19073 191 aa2.07□□□□□ -2.08
RTT101YJL047C PRP2P20095 876 aaPredicted RBP2.07□□□□□ -2.08
RTT101YJL047C RNR1P21524 888 aaKnown RBP2.07□□□□□ -2.08
RTT101YJL047C MSN4P33749 630 aa2.07□□□□□ -2.08
RTT101YJL047C TIF3P34167 436 aaKnown RBP2.07□□□□□ -2.08
RTT101YJL047C KES1P35844 434 aaKnown RBP2.07□□□□□ -2.08
RTT101YJL047C TPO5P36029 618 aa2.07□□□□□ -2.08
RTT101YJL047C TCD2P36101 447 aaKnown RBP2.07□□□□□ -2.08
RTT101YJL047C PFF1P38244 976 aa2.07□□□□□ -2.08
RTT101YJL047C RFC3P38629 340 aa2.07□□□□□ -2.08
RTT101YJL047C YHL012WP38709 493 aa2.07□□□□□ -2.08
RTT101YJL047C MSS4P38994 779 aa2.07□□□□□ -2.08
RTT101YJL047C NUP60P39705 539 aa2.07□□□□□ -2.08
RTT101YJL047C YTA12P40341 825 aa2.07□□□□□ -2.08
RTT101YJL047C GCD14P46959 383 aaPredicted RBP2.07□□□□□ -2.08
RTT101YJL047C ECM27P47144 725 aa2.07□□□□□ -2.08
RTT101YJL047C EFM3P47163 339 aa2.07□□□□□ -2.08
RTT101YJL047C IMD4P50094 524 aaKnown RBP2.07□□□□□ -2.08
RTT101YJL047C LYS5P50113 272 aa2.07□□□□□ -2.08
RTT101YJL047C COS12P53053 380 aa2.07□□□□□ -2.08
RTT101YJL047C YGR012WP53206 393 aa2.07□□□□□ -2.08
RTT101YJL047C YNL050CP53952 270 aa2.07□□□□□ -2.08
RTT101YJL047C UTP6Q02354 440 aaKnown RBP2.07□□□□□ -2.08
RTT101YJL047C TY1A-MR1Q04215 440 aa2.07□□□□□ -2.08
RTT101YJL047C CRF1Q04930 467 aa2.07□□□□□ -2.08
RTT101YJL047C YLR413WQ06689 675 aa2.07□□□□□ -2.08
RTT101YJL047C MDM36Q06820 579 aa2.07□□□□□ -2.08
RTT101YJL047C GSH2Q08220 491 aa2.07□□□□□ -2.08
RTT101YJL047C ULA1Q12059 462 aa2.07□□□□□ -2.08
RTT101YJL047C SLP1Q12232 587 aa2.07□□□□□ -2.08
RTT101YJL047C PRS5Q12265 496 aaKnown RBP2.07□□□□□ -2.08
RTT101YJL047C LDB17Q12342 491 aa2.07□□□□□ -2.08
RTT101YJL047C ERG27Q12452 347 aaKnown RBP2.07□□□□□ -2.08
RTT101YJL047C SFG1Q12507 346 aa2.07□□□□□ -2.08
RTT101YJL047C YML133CQ03099 1374 aa2.06□□□□□ -2.08
RTT101YJL047C YLL067CQ07888 1374 aa2.06□□□□□ -2.08
RTT101YJL047C YLL066CQ99208 1374 aa2.06□□□□□ -2.08
RTT101YJL047C SGS1P35187 1447 aa2.06□□□□□ -2.08
RTT101YJL047C RPS9BP05755 195 aaKnown RBP2.06□□□□□ -2.08
RTT101YJL047C STE3P06783 470 aa2.06□□□□□ -2.08
RTT101YJL047C CAR2P07991 424 aaKnown RBP2.06□□□□□ -2.08
RTT101YJL047C ERG20P08524 352 aaKnown RBP2.06□□□□□ -2.08
RTT101YJL047C TUB3P09734 445 aaKnown RBP2.06□□□□□ -2.08
RTT101YJL047C PPH22P23595 377 aa2.06□□□□□ -2.08
RTT101YJL047C YIH1P25637 258 aa2.06□□□□□ -2.08
RTT101YJL047C GCD7P32502 381 aaPredicted RBP2.06□□□□□ -2.08
RTT101YJL047C MRE11P32829 692 aa2.06□□□□□ -2.08
RTT101YJL047C PXL1P36166 706 aa2.06□□□□□ -2.08
RTT101YJL047C TOS1P38288 455 aa2.06□□□□□ -2.08
RTT101YJL047C LIN1P38852 340 aaPredicted RBP2.06□□□□□ -2.08
RTT101YJL047C GET2P40056 285 aa2.06□□□□□ -2.08
RTT101YJL047C ASG1P40467 964 aa2.06□□□□□ -2.08
RTT101YJL047C INA22P40576 216 aa2.06□□□□□ -2.08
RTT101YJL047C TWF1P53250 332 aa2.06□□□□□ -2.08
RTT101YJL047C RRP46P53256 223 aaPredicted RBP2.06□□□□□ -2.08
RTT101YJL047C REX2P54964 269 aaKnown RBP2.06□□□□□ -2.08
RTT101YJL047C EGD1Q02642 157 aaKnown RBP2.06□□□□□ -2.08
RTT101YJL047C YDR179W-AQ03983 463 aa2.06□□□□□ -2.08
RTT101YJL047C ECM7Q06200 448 aa2.06□□□□□ -2.08
RTT101YJL047C DIB1Q06819 143 aaPredicted RBP2.06□□□□□ -2.08
RTT101YJL047C SIL1Q08199 421 aa2.06□□□□□ -2.08
RTT101YJL047C TFB5Q3E7C1 72 aaPredicted RBP2.06□□□□□ -2.08
RTT101YJL047C RAD61Q99359 647 aa2.06□□□□□ -2.08
RTT101YJL047C CBP2P03874 630 aaPredicted RBP2.06□□□□□ -2.08
RTT101YJL047C MRP13P12686 339 aa2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms