RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR043CYIR043C GSH1P32477 678 aa5.65□□□□□ -1.5
YIR043CYIR043C VMA8P32610 256 aaKnown RBP5.65□□□□□ -1.5
YIR043CYIR043C RPC34P32910 317 aa5.65□□□□□ -1.5
YIR043CYIR043C MNN2P38069 597 aa5.65□□□□□ -1.5
YIR043CYIR043C YEL057CP39983 233 aa5.65□□□□□ -1.5
YIR043CYIR043C MAF1P41910 395 aa5.65□□□□□ -1.5
YIR043CYIR043C CTK2P46962 323 aa5.65□□□□□ -1.5
YIR043CYIR043C DPB11P47027 764 aaPredicted RBP5.65□□□□□ -1.5
YIR043CYIR043C IRC8P47046 822 aa5.65□□□□□ -1.5
YIR043CYIR043C RSC1P53236 928 aa5.65□□□□□ -1.5
YIR043CYIR043C IST1P53843 298 aaPredicted RBP5.65□□□□□ -1.5
YIR043CYIR043C ARO10Q06408 635 aa5.65□□□□□ -1.5
YIR043CYIR043C BUD7Q08754 746 aa5.65□□□□□ -1.5
YIR043CYIR043C BI2P03873 423 aa5.64□□□□□ -1.51
YIR043CYIR043C EST1P17214 699 aaPredicted RBP5.64□□□□□ -1.51
YIR043CYIR043C PXA2P34230 853 aa5.64□□□□□ -1.51
YIR043CYIR043C SGN1P40561 250 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
YIR043CYIR043C YFR020WP43600 232 aa5.64□□□□□ -1.51
YIR043CYIR043C DIA3P52290 468 aa5.64□□□□□ -1.51
YIR043CYIR043C YGR066CP53242 292 aa5.64□□□□□ -1.51
YIR043CYIR043C YPR003CP53394 754 aa5.64□□□□□ -1.51
YIR043CYIR043C YNL058CP53947 316 aa5.64□□□□□ -1.51
YIR043CYIR043C THI3Q07471 609 aa5.64□□□□□ -1.51
YIR043CYIR043C IRC10Q08118 586 aa5.64□□□□□ -1.51
YIR043CYIR043C PET111P08468 800 aa5.63□□□□□ -1.51
YIR043CYIR043C SPO11P23179 398 aa5.63□□□□□ -1.51
YIR043CYIR043C UBP11P36026 717 aa5.63□□□□□ -1.51
YIR043CYIR043C CCT6P39079 546 aa5.63□□□□□ -1.51
YIR043CYIR043C LSM5P40089 93 aaKnown RBP5.63□□□□□ -1.51
YIR043CYIR043C YIL166CP40445 542 aa5.63□□□□□ -1.51
YIR043CYIR043C AXL1P40851 1208 aa5.63□□□□□ -1.51
YIR043CYIR043C FMP30Q02883 468 aa5.63□□□□□ -1.51
YIR043CYIR043C LUC7Q07508 261 aaPredicted RBP5.63□□□□□ -1.51
YIR043CYIR043C YPL272CQ08984 517 aa5.63□□□□□ -1.51
YIR043CYIR043C RIM20Q12033 661 aa5.63□□□□□ -1.51
YIR043CYIR043C MSL5Q12186 476 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51not detected
YIR043CYIR043C DFR1P07807 211 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
YIR043CYIR043C RPC53P25441 422 aa5.62□□□□□ -1.51
YIR043CYIR043C GPI10P30777 616 aa5.62□□□□□ -1.51
YIR043CYIR043C YKL050CP35736 922 aa5.62□□□□□ -1.51
YIR043CYIR043C MUM2P38236 366 aa5.62□□□□□ -1.51
YIR043CYIR043C DIA4P38705 446 aaPredicted RBP5.62□□□□□ -1.51
YIR043CYIR043C MET18P40469 1032 aa5.62□□□□□ -1.51
YIR043CYIR043C MET28P40573 187 aa5.62□□□□□ -1.51
YIR043CYIR043C SAE2P46946 345 aa5.62□□□□□ -1.51
YIR043CYIR043C MRK1P50873 501 aa5.62□□□□□ -1.51
YIR043CYIR043C VID30P53076 958 aa5.62□□□□□ -1.51
YIR043CYIR043C YGR250CP53316 781 aaKnown RBP5.62□□□□□ -1.51
YIR043CYIR043C APM1Q00776 475 aaPredicted RBP5.62□□□□□ -1.51
YIR043CYIR043C MAK10Q02197 733 aa5.62□□□□□ -1.51
YIR043CYIR043C YDR239CQ03780 787 aa5.62□□□□□ -1.51
YIR043CYIR043C VPS38Q05919 439 aa5.62□□□□□ -1.51
YIR043CYIR043C GRC3Q07845 632 aa5.62□□□□□ -1.51
YIR043CYIR043C FMP40Q08968 688 aaPredicted RBP5.62□□□□□ -1.51
YIR043CYIR043C INP53Q12271 1107 aa5.62□□□□□ -1.51
YIR043CYIR043C SNU66Q12420 587 aaPredicted RBP5.62□□□□□ -1.51
YIR043CYIR043C GRX6Q12438 231 aa5.62□□□□□ -1.51
YIR043CYIR043C MF(ALPHA)1P01149 165 aa5.61□□□□□ -1.51
YIR043CYIR043C GAL80P04387 435 aa5.61□□□□□ -1.51
YIR043CYIR043C MRP2P10663 115 aaPredicted RBP5.61□□□□□ -1.51
YIR043CYIR043C PDX1P16451 410 aa5.61□□□□□ -1.51
YIR043CYIR043C ADH7P25377 361 aa5.61□□□□□ -1.51
YIR043CYIR043C DBF4P32325 704 aa5.61□□□□□ -1.51
YIR043CYIR043C PKP1P40530 394 aa5.61□□□□□ -1.51
YIR043CYIR043C RPN11P43588 306 aaKnown RBP5.61□□□□□ -1.51
YIR043CYIR043C STU2P46675 888 aa5.61□□□□□ -1.51
YIR043CYIR043C ZDS2P54786 942 aa5.61□□□□□ -1.51
YIR043CYIR043C ATG9Q12142 997 aa5.61□□□□□ -1.51
YIR043CYIR043C SUT2Q12286 268 aa5.61□□□□□ -1.51
YIR043CYIR043C SEF1P34228 1148 aa5.6□□□□□ -1.51
YIR043CYIR043C VID24P38263 362 aa5.6□□□□□ -1.51
YIR043CYIR043C SRP72P38688 640 aaKnown RBP5.6□□□□□ -1.51
YIR043CYIR043C SMF1P38925 575 aa5.6□□□□□ -1.51
YIR043CYIR043C UIP3P39547 235 aa5.6□□□□□ -1.51
YIR043CYIR043C ROK1P45818 564 aaPredicted RBP5.6□□□□□ -1.51
YIR043CYIR043C NNF2P53253 936 aa5.6□□□□□ -1.51
YIR043CYIR043C PFA5Q03289 374 aa5.6□□□□□ -1.51
YIR043CYIR043C AVL9Q12500 764 aa5.6□□□□□ -1.51
YIR043CYIR043C SMC6Q12749 1114 aa5.6□□□□□ -1.51
YIR043CYIR043C SPE2P21182 396 aa5.59□□□□□ -1.51
YIR043CYIR043C GSY2P27472 705 aa5.59□□□□□ -1.51
YIR043CYIR043C BLI1P35727 113 aa5.59□□□□□ -1.51
YIR043CYIR043C FTH1P38310 465 aa5.59□□□□□ -1.51
YIR043CYIR043C PAC2P39937 518 aa5.59□□□□□ -1.51
YIR043CYIR043C JJJ1P53863 590 aa5.59□□□□□ -1.51
YIR043CYIR043C IPI3P53877 555 aa5.59□□□□□ -1.51
YIR043CYIR043C DPB4Q04603 196 aaKnown RBP5.59□□□□□ -1.51
YIR043CYIR043C YOL159CQ08300 171 aa5.59□□□□□ -1.51
YIR043CYIR043C YLR049CQ12110 428 aa5.59□□□□□ -1.51
YIR043CYIR043C YOL159C-AQ3E769 90 aa5.59□□□□□ -1.51
YIR043CYIR043C SGS1P35187 1447 aa5.58□□□□□ -1.52
YIR043CYIR043C KGD1P20967 1014 aaKnown RBP5.58□□□□□ -1.52
YIR043CYIR043C MSS51P32335 436 aa5.58□□□□□ -1.52
YIR043CYIR043C SSE2P32590 693 aaKnown RBP5.58□□□□□ -1.52
YIR043CYIR043C SNU114P36048 1008 aaKnown RBP5.58□□□□□ -1.52
YIR043CYIR043C CST26P38226 397 aa5.58□□□□□ -1.52
YIR043CYIR043C IMD2P38697 523 aaKnown RBP5.58□□□□□ -1.52
YIR043CYIR043C ERV46P39727 415 aa5.58□□□□□ -1.52
YIR043CYIR043C ALG5P40350 334 aa5.58□□□□□ -1.52
YIR043CYIR043C PET130P47065 347 aa5.58□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms