RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W SPO1P53541 631 aa2.15□□□□□ -2.07
RTT107YHR154W YNL050CP53952 270 aa2.15□□□□□ -2.07
RTT107YHR154W RSM24Q03976 319 aa2.15□□□□□ -2.07
RTT107YHR154W BUD22Q04347 519 aaKnown RBP2.15□□□□□ -2.07
RTT107YHR154W TRI1Q05024 226 aa2.15□□□□□ -2.07
RTT107YHR154W HOF1Q05080 669 aa2.15□□□□□ -2.07
RTT107YHR154W YPR172WQ06608 200 aa2.15□□□□□ -2.07
RTT107YHR154W THI3Q07471 609 aa2.15□□□□□ -2.07
RTT107YHR154W PUF3Q07807 879 aaKnown RBP RIP-Chip data2.15□□□□□ -2.07not detected
RTT107YHR154W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.15□□□□□ -2.07not detected
RTT107YHR154W RCL1Q08096 367 aaPredicted RBP2.15□□□□□ -2.07
RTT107YHR154W PCL8Q08966 492 aa2.15□□□□□ -2.07
RTT107YHR154W FKS1P38631 1876 aaKnown RBP2.15□□□□□ -2.07
RTT107YHR154W PUT4P15380 627 aa2.14□□□□□ -2.07
RTT107YHR154W NAR1P23503 491 aaKnown RBP2.14□□□□□ -2.07
RTT107YHR154W SED4P25365 1065 aa2.14□□□□□ -2.07
RTT107YHR154W CAP1P28495 268 aaKnown RBP2.14□□□□□ -2.07
RTT107YHR154W ELM1P32801 640 aa2.14□□□□□ -2.07
RTT107YHR154W PGM1P33401 570 aaKnown RBP2.14□□□□□ -2.07
RTT107YHR154W SIF2P38262 535 aa2.14□□□□□ -2.07
RTT107YHR154W OSW5P40219 148 aa2.14□□□□□ -2.07
RTT107YHR154W PKP1P40530 394 aa2.14□□□□□ -2.07
RTT107YHR154W YGR012WP53206 393 aa2.14□□□□□ -2.07
RTT107YHR154W YNR068CP53754 272 aa2.14□□□□□ -2.07
RTT107YHR154W DCI1Q08558 271 aa2.14□□□□□ -2.07
RTT107YHR154W SPE3Q12074 293 aaKnown RBP2.14□□□□□ -2.07
RTT107YHR154W UPC2Q12151 913 aa2.14□□□□□ -2.07
RTT107YHR154W ACO1P19414 778 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
RTT107YHR154W PRP2P20095 876 aaPredicted RBP2.14□□□□□ -2.07
RTT107YHR154W MF(ALPHA)2P32435 120 aa2.14□□□□□ -2.07
RTT107YHR154W PET127P32606 800 aa2.14□□□□□ -2.07
RTT107YHR154W SWH1P35845 1188 aa2.14□□□□□ -2.07
RTT107YHR154W TOM71P38825 639 aaKnown RBP2.14□□□□□ -2.07
RTT107YHR154W SMF1P38925 575 aa2.14□□□□□ -2.07
RTT107YHR154W UBP5P39944 805 aa2.14□□□□□ -2.07
RTT107YHR154W ASG1P40467 964 aa2.14□□□□□ -2.07
RTT107YHR154W GTS1P40956 396 aa2.14□□□□□ -2.07
RTT107YHR154W YFH7P43591 353 aa2.14□□□□□ -2.07
RTT107YHR154W ARI1P53111 347 aaKnown RBP2.14□□□□□ -2.07
RTT107YHR154W YNL144CP53907 740 aa2.14□□□□□ -2.07
RTT107YHR154W YDR131CQ03899 556 aa2.14□□□□□ -2.07
RTT107YHR154W RAD33Q04231 177 aa2.14□□□□□ -2.07
RTT107YHR154W VTS1Q08831 523 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
RTT107YHR154W BMS1Q08965 1183 aaKnown RBP2.14□□□□□ -2.07
RTT107YHR154W SWM1Q12379 170 aa2.14□□□□□ -2.07
RTT107YHR154W YOR019WQ99248 730 aa2.14□□□□□ -2.07
RTT107YHR154W MOT1P32333 1867 aa2.14□□□□□ -2.07
RTT107YHR154W CPA2P03965 1118 aaKnown RBP2.13□□□□□ -2.07
RTT107YHR154W GAL80P04387 435 aa2.13□□□□□ -2.07
RTT107YHR154W SUP35P05453 685 aaKnown RBP2.13□□□□□ -2.07
RTT107YHR154W PDE2P06776 526 aa2.13□□□□□ -2.07
RTT107YHR154W CWH43P25618 953 aa2.13□□□□□ -2.07
RTT107YHR154W POT1P27796 417 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
RTT107YHR154W CBF2P32504 956 aa2.13□□□□□ -2.07
RTT107YHR154W IME2P32581 645 aa2.13□□□□□ -2.07
RTT107YHR154W POL12P38121 705 aaPredicted RBP2.13□□□□□ -2.07
RTT107YHR154W RRF1P38771 230 aa2.13□□□□□ -2.07
RTT107YHR154W REV7P38927 245 aa2.13□□□□□ -2.07
RTT107YHR154W LYS9P38999 446 aa2.13□□□□□ -2.07
RTT107YHR154W FLC2P39719 783 aa2.13□□□□□ -2.07
RTT107YHR154W EPL1P43572 832 aa2.13□□□□□ -2.07
RTT107YHR154W CTR1P49573 406 aa2.13□□□□□ -2.07
RTT107YHR154W CUE3P53137 624 aaKnown RBP2.13□□□□□ -2.07
RTT107YHR154W DSE4P53753 1117 aa2.13□□□□□ -2.07
RTT107YHR154W CLU1Q03690 1277 aaKnown RBP2.13□□□□□ -2.07
RTT107YHR154W ROY1Q04847 553 aa2.13□□□□□ -2.07
RTT107YHR154W APC5Q08683 685 aa2.13□□□□□ -2.07
RTT107YHR154W GPR1Q12361 961 aa2.13□□□□□ -2.07
RTT107YHR154W LAM4P38800 1345 aa2.13□□□□□ -2.07
RTT107YHR154W GYP6P32806 458 aa2.13□□□□□ -2.07
RTT107YHR154W OTU2P38747 307 aaKnown RBP2.13□□□□□ -2.07
RTT107YHR154W YEL057CP39983 233 aa2.13□□□□□ -2.07
RTT107YHR154W SGN1P40561 250 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
RTT107YHR154W BST1P43571 1029 aa2.13□□□□□ -2.07
RTT107YHR154W GTF1P53260 183 aaPredicted RBP2.13□□□□□ -2.07
RTT107YHR154W YGR111WP53265 400 aa2.13□□□□□ -2.07
RTT107YHR154W YGR130CP53278 816 aa2.13□□□□□ -2.07
RTT107YHR154W RSM28Q03430 361 aa2.13□□□□□ -2.07
RTT107YHR154W RCR2Q03446 210 aaKnown RBP2.13□□□□□ -2.07
RTT107YHR154W PML1Q07930 204 aaPredicted RBP2.13□□□□□ -2.07
RTT107YHR154W MLH2Q07980 695 aa2.13□□□□□ -2.07
RTT107YHR154W DIA2Q08496 732 aaPredicted RBP2.13□□□□□ -2.07
RTT107YHR154W YOR352WQ08816 343 aa2.13□□□□□ -2.07
RTT107YHR154W TGL5Q12043 749 aa2.13□□□□□ -2.07
RTT107YHR154W YLR122CQ12312 125 aa2.13□□□□□ -2.07
RTT107YHR154W PGA3Q12746 312 aaKnown RBP2.13□□□□□ -2.07
RTT107YHR154W APE1P14904 514 aa2.13□□□□□ -2.07
RTT107YHR154W ADH7P25377 361 aa2.13□□□□□ -2.07
RTT107YHR154W DAL80P26343 269 aa2.13□□□□□ -2.07
RTT107YHR154W PUP2P32379 260 aa2.13□□□□□ -2.07
RTT107YHR154W PUB1P32588 453 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
RTT107YHR154W RRP1P35178 278 aaPredicted RBP2.13□□□□□ -2.07
RTT107YHR154W VID24P38263 362 aa2.13□□□□□ -2.07
RTT107YHR154W EHT1P38295 451 aa2.13□□□□□ -2.07
RTT107YHR154W VPS45P38932 577 aa2.13□□□□□ -2.07
RTT107YHR154W PFA3P42836 336 aa2.13□□□□□ -2.07
RTT107YHR154W IRC8P47046 822 aa2.13□□□□□ -2.07
RTT107YHR154W ASE1P50275 885 aa2.13□□□□□ -2.07
RTT107YHR154W TAM41P53230 385 aa2.13□□□□□ -2.07
RTT107YHR154W TOF1P53840 1238 aa2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms