RNA–Protein interactions for RNA: YER049W

TPA1, Transcript of Poly(rA)-binding protein, yeast

Gene TPA1, Length 1,935 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPA1	YER049W	IES3	Q12345	250 aa		4.17	□□□□□ -1.74
TPA1	YER049W	CNA1	P23287	553 aa		4.17	□□□□□ -1.74
TPA1	YER049W	CYM1	P32898	989 aa		4.17	□□□□□ -1.74
TPA1	YER049W	KES1	P35844	434 aa	Known RBP	4.17	□□□□□ -1.74
TPA1	YER049W	PHO89	P38361	574 aa		4.17	□□□□□ -1.74
TPA1	YER049W	UTP9	P38882	575 aa	Known RBP	4.17	□□□□□ -1.74
TPA1	YER049W	YJL206C	P39529	758 aa		4.17	□□□□□ -1.74
TPA1	YER049W	ARB1	P40024	610 aa	Known RBP	4.17	□□□□□ -1.74
TPA1	YER049W	YIL054W	P40524	105 aa		4.17	□□□□□ -1.74
TPA1	YER049W	FMP32	P43557	207 aa		4.17	□□□□□ -1.74
TPA1	YER049W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	RIP-Chip
TPA1	YER049W	BNA3	P47039	444 aa	Known RBP	4.17	□□□□□ -1.74
TPA1	YER049W	NOP9	P47077	666 aa	Known RBP	4.17	□□□□□ -1.74
TPA1	YER049W	CCT8	P47079	568 aa	Known RBP	4.17	□□□□□ -1.74
TPA1	YER049W	RBL2	P48606	106 aa	Known RBP	4.17	□□□□□ -1.74
TPA1	YER049W	YGL036W	P53185	909 aa	Predicted RBP	4.17	□□□□□ -1.74
TPA1	YER049W	ASI2	P53895	289 aa		4.17	□□□□□ -1.74
TPA1	YER049W	GPD1	Q00055	391 aa	Known RBP	4.17	□□□□□ -1.74
TPA1	YER049W	YKR005C	Q02203	525 aa		4.17	□□□□□ -1.74
TPA1	YER049W	RNY1	Q02933	434 aa	Known RBP	4.17	□□□□□ -1.74
TPA1	YER049W	RAD30	Q04049	632 aa		4.17	□□□□□ -1.74
TPA1	YER049W	FMP42	Q04991	504 aa		4.17	□□□□□ -1.74
TPA1	YER049W	PSR1	Q07800	427 aa		4.17	□□□□□ -1.74
TPA1	YER049W	SGT2	Q12118	346 aa	Known RBP	4.17	□□□□□ -1.74
TPA1	YER049W	YPK1	P12688	680 aa	Known RBP	4.16	□□□□□ -1.74
TPA1	YER049W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
TPA1	YER049W	URA10	P30402	227 aa		4.16	□□□□□ -1.74
TPA1	YER049W	NPL6	P32832	435 aa		4.16	□□□□□ -1.74
TPA1	YER049W	BUD2	P33314	1104 aa		4.16	□□□□□ -1.74
TPA1	YER049W	TIF3	P34167	436 aa	Known RBP	4.16	□□□□□ -1.74
TPA1	YER049W	SHP1	P34223	423 aa		4.16	□□□□□ -1.74
TPA1	YER049W	DBP7	P36120	742 aa	Known RBP	4.16	□□□□□ -1.74
TPA1	YER049W	YRO2	P38079	344 aa		4.16	□□□□□ -1.74
TPA1	YER049W	APN2	P38207	520 aa		4.16	□□□□□ -1.74
TPA1	YER049W	YBR259W	P38338	688 aa		4.16	□□□□□ -1.74
TPA1	YER049W	YEL025C	P39991	1188 aa		4.16	□□□□□ -1.74
TPA1	YER049W	TOK1	P40310	691 aa		4.16	□□□□□ -1.74
TPA1	YER049W	STB1	P42845	420 aa		4.16	□□□□□ -1.74
TPA1	YER049W	MND1	P53102	219 aa		4.16	□□□□□ -1.74
TPA1	YER049W	SRL4	Q03085	281 aa		4.16	□□□□□ -1.74
TPA1	YER049W	UGO1	Q03327	502 aa		4.16	□□□□□ -1.74
TPA1	YER049W	YMR209C	Q03648	457 aa		4.16	□□□□□ -1.74
TPA1	YER049W	SND1	Q04007	877 aa		4.16	□□□□□ -1.74
TPA1	YER049W	YET2	Q04210	160 aa		4.16	□□□□□ -1.74
TPA1	YER049W	TAF11	Q04226	346 aa		4.16	□□□□□ -1.74
TPA1	YER049W	SPC2	Q04969	178 aa		4.16	□□□□□ -1.74
TPA1	YER049W	ATG26	Q06321	1198 aa		4.16	□□□□□ -1.74
TPA1	YER049W	RGS2	Q99188	309 aa		4.16	□□□□□ -1.74
TPA1	YER049W	STE2	D6VTK4	431 aa		4.15	□□□□□ -1.74
TPA1	YER049W	CAR1	P00812	333 aa	Known RBP	4.15	□□□□□ -1.74
TPA1	YER049W	GAL10	P04397	699 aa		4.15	□□□□□ -1.74
TPA1	YER049W	ASP3-2	P0CX77	362 aa		4.15	□□□□□ -1.74
TPA1	YER049W	ASP3-3	P0CX78	362 aa		4.15	□□□□□ -1.74
TPA1	YER049W	ASP3-4	P0CX79	362 aa		4.15	□□□□□ -1.74
TPA1	YER049W	ASP3-1	P0CZ17	362 aa		4.15	□□□□□ -1.74
TPA1	YER049W	MSM1	P22438	575 aa		4.15	□□□□□ -1.74
TPA1	YER049W	AMD2	P22580	549 aa		4.15	□□□□□ -1.74
TPA1	YER049W	HEM12	P32347	362 aa	Predicted RBP	4.15	□□□□□ -1.74
TPA1	YER049W	RIM1	P32445	135 aa	Known RBP	4.15	□□□□□ -1.74
TPA1	YER049W	PHA2	P32452	334 aa		4.15	□□□□□ -1.74
TPA1	YER049W	FRE1	P32791	686 aa		4.15	□□□□□ -1.74
TPA1	YER049W	SKG6	P32900	734 aa	Predicted RBP	4.15	□□□□□ -1.74
TPA1	YER049W	RIB7	P33312	244 aa		4.15	□□□□□ -1.74
TPA1	YER049W	UTP11	P34247	250 aa	Predicted RBP	4.15	□□□□□ -1.74
TPA1	YER049W	RRN3	P36070	627 aa		4.15	□□□□□ -1.74
TPA1	YER049W	KAP104	P38217	918 aa	Known RBP	4.15	□□□□□ -1.74
TPA1	YER049W	MMS4	P38257	691 aa		4.15	□□□□□ -1.74
TPA1	YER049W	YHL012W	P38709	493 aa		4.15	□□□□□ -1.74
TPA1	YER049W	OTU2	P38747	307 aa	Known RBP	4.15	□□□□□ -1.74
TPA1	YER049W	BZZ1	P38822	633 aa		4.15	□□□□□ -1.74
TPA1	YER049W	PIK1	P39104	1066 aa		4.15	□□□□□ -1.74
TPA1	YER049W	NPT1	P39683	429 aa	Known RBP	4.15	□□□□□ -1.74
TPA1	YER049W	CCT7	P42943	550 aa	Known RBP	4.15	□□□□□ -1.74
TPA1	YER049W	EAF6	P47128	113 aa		4.15	□□□□□ -1.74
TPA1	YER049W	SQS1	P53866	767 aa	Known RBP	4.15	□□□□□ -1.74
TPA1	YER049W	TRM44	Q02648	567 aa	Known RBP	4.15	□□□□□ -1.74
TPA1	YER049W	SRP1	Q02821	542 aa	Known RBP	4.15	□□□□□ -1.74
TPA1	YER049W	YDR239C	Q03780	787 aa		4.15	□□□□□ -1.74
TPA1	YER049W	RSM24	Q03976	319 aa		4.15	□□□□□ -1.74
TPA1	YER049W	ADF1	Q2V2Q1	113 aa		4.15	□□□□□ -1.74
TPA1	YER049W	IZH4	Q99393	312 aa		4.15	□□□□□ -1.74
TPA1	YER049W	ECM29	P38737	1868 aa		4.15	□□□□□ -1.75
TPA1	YER049W	CBP1	P07252	654 aa		4.15	□□□□□ -1.75
TPA1	YER049W	SUI3	P09064	285 aa	Known RBP	4.15	□□□□□ -1.75
TPA1	YER049W	FBP1	P09201	348 aa		4.15	□□□□□ -1.75
TPA1	YER049W	VPS34	P22543	875 aa		4.15	□□□□□ -1.75
TPA1	YER049W	TKL1	P23254	680 aa	Known RBP	4.15	□□□□□ -1.75
TPA1	YER049W	CLB2	P24869	491 aa		4.15	□□□□□ -1.75
TPA1	YER049W	GID7	P25569	745 aa		4.15	□□□□□ -1.75
TPA1	YER049W	HRR25	P29295	494 aa	Known RBP	4.15	□□□□□ -1.75
TPA1	YER049W	ATO2	P32907	282 aa		4.15	□□□□□ -1.75
TPA1	YER049W	DOM34	P33309	386 aa		4.15	□□□□□ -1.75
TPA1	YER049W	NOP4	P37838	685 aa	Known RBP	4.15	□□□□□ -1.75
TPA1	YER049W	FES1	P38260	290 aa		4.15	□□□□□ -1.75
TPA1	YER049W	ATG12	P38316	186 aa		4.15	□□□□□ -1.75
TPA1	YER049W	GOS1	P38736	223 aa		4.15	□□□□□ -1.75
TPA1	YER049W	EAF5	P39995	279 aa		4.15	□□□□□ -1.75
TPA1	YER049W	IES5	P40060	125 aa		4.15	□□□□□ -1.75
TPA1	YER049W	ERR3	P42222	437 aa		4.15	□□□□□ -1.75
TPA1	YER049W	YFL012W	P43580	148 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms