RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W TY2A-OR1Q12439 438 aa3□□□□□ -1.93
SSF2YDR312W TY2A-DR3Q99303 438 aa3□□□□□ -1.93
SSF2YDR312W TY1B-NL2Q99337 1749 aaKnown RBP3□□□□□ -1.93
SSF2YDR312W TPK1P06244 397 aa2.99□□□□□ -1.93
SSF2YDR312W PWP2P25635 923 aaKnown RBP2.99□□□□□ -1.93
SSF2YDR312W MSS51P32335 436 aa2.99□□□□□ -1.93
SSF2YDR312W NUP120P35729 1037 aa2.99□□□□□ -1.93
SSF2YDR312W ARN1P38731 627 aa2.99□□□□□ -1.93
SSF2YDR312W YIL161WP40449 235 aaKnown RBP2.99□□□□□ -1.93
SSF2YDR312W YIR016WP40572 265 aa2.99□□□□□ -1.93
SSF2YDR312W CTF18P49956 741 aa2.99□□□□□ -1.93
SSF2YDR312W YGR021WP53212 290 aa2.99□□□□□ -1.93
SSF2YDR312W GTR1Q00582 310 aa2.99□□□□□ -1.93
SSF2YDR312W SWA2Q06677 668 aa2.99□□□□□ -1.93
SSF2YDR312W SNA4Q07549 140 aa2.99□□□□□ -1.93
SSF2YDR312W TMA16Q08687 178 aa2.99□□□□□ -1.93
SSF2YDR312W BUD7Q08754 746 aa2.99□□□□□ -1.93
SSF2YDR312W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
SSF2YDR312W SUI3P09064 285 aaKnown RBP2.98□□□□□ -1.93
SSF2YDR312W SRP54P20424 541 aaKnown RBP2.98□□□□□ -1.93
SSF2YDR312W CNA1P23287 553 aa2.98□□□□□ -1.93
SSF2YDR312W XRS2P33301 854 aa2.98□□□□□ -1.93
SSF2YDR312W GND1P38720 489 aaKnown RBP2.98□□□□□ -1.93
SSF2YDR312W PHM8P40025 321 aa2.98□□□□□ -1.93
SSF2YDR312W PSP1P50896 841 aaKnown RBP2.98□□□□□ -1.93
SSF2YDR312W BOP3P53958 396 aa2.98□□□□□ -1.93
SSF2YDR312W PDR8Q06149 701 aa2.98□□□□□ -1.93
SSF2YDR312W TRM8Q12009 286 aa2.98□□□□□ -1.93
SSF2YDR312W UBX3Q12229 455 aa2.98□□□□□ -1.93
SSF2YDR312W RRI1Q12468 440 aa2.98□□□□□ -1.93
SSF2YDR312W VMR1P38735 1592 aa2.97□□□□□ -1.93
SSF2YDR312W YBT1P32386 1661 aa2.97□□□□□ -1.93
SSF2YDR312W YER145C-AA0A023PYF4 145 aa2.97□□□□□ -1.93
SSF2YDR312W SNF1P06782 633 aaKnown RBP2.97□□□□□ -1.93
SSF2YDR312W SPO16P17122 198 aa2.97□□□□□ -1.93
SSF2YDR312W YCR006CP25350 157 aa2.97□□□□□ -1.93
SSF2YDR312W RAD16P31244 790 aa2.97□□□□□ -1.93
SSF2YDR312W OCT1P35999 772 aa2.97□□□□□ -1.93
SSF2YDR312W ADE17P38009 592 aaKnown RBP2.97□□□□□ -1.93
SSF2YDR312W SCO2P38072 301 aa2.97□□□□□ -1.93
SSF2YDR312W UBP13P38187 747 aa2.97□□□□□ -1.93
SSF2YDR312W PSY4P38193 441 aa2.97□□□□□ -1.93
SSF2YDR312W RPN11P43588 306 aaKnown RBP2.97□□□□□ -1.93
SSF2YDR312W LYS4P49367 693 aaPredicted RBP2.97□□□□□ -1.93
SSF2YDR312W ASE1P50275 885 aa2.97□□□□□ -1.93
SSF2YDR312W VMS1Q04311 632 aaKnown RBP2.97□□□□□ -1.93
SSF2YDR312W ECM22Q05958 814 aaPredicted RBP2.97□□□□□ -1.93
SSF2YDR312W CRN1Q06440 651 aa2.97□□□□□ -1.93
SSF2YDR312W PSR2Q07949 397 aa2.97□□□□□ -1.93
SSF2YDR312W NEW1Q08972 1196 aaKnown RBP2.97□□□□□ -1.93
SSF2YDR312W SSM4P40318 1319 aa2.96□□□□□ -1.94
SSF2YDR312W GPA1P08539 472 aa2.96□□□□□ -1.94
SSF2YDR312W GCS1P35197 352 aa2.96□□□□□ -1.94
SSF2YDR312W VPS41P38959 992 aa2.96□□□□□ -1.94
SSF2YDR312W PSD1P39006 500 aa2.96□□□□□ -1.94
SSF2YDR312W TPA1P40032 644 aaKnown RBP2.96□□□□□ -1.94
SSF2YDR312W YIL152WP40455 235 aa2.96□□□□□ -1.94
SSF2YDR312W ASG1P40467 964 aa2.96□□□□□ -1.94
SSF2YDR312W SWP82P43554 623 aa2.96□□□□□ -1.94
SSF2YDR312W YPT11P48559 417 aa2.96□□□□□ -1.94
SSF2YDR312W DCP2P53550 970 aaKnown RBP2.96□□□□□ -1.94
SSF2YDR312W EAF7P53911 425 aaKnown RBP2.96□□□□□ -1.94
SSF2YDR312W REG1Q00816 1014 aa2.96□□□□□ -1.94
SSF2YDR312W VID22Q05934 901 aa2.96□□□□□ -1.94
SSF2YDR312W PIG1Q06216 648 aa2.96□□□□□ -1.94
SSF2YDR312W MCH4Q08268 501 aa2.96□□□□□ -1.94
SSF2YDR312W IML1P47170 1584 aa2.95□□□□□ -1.94
SSF2YDR312W PET111P08468 800 aa2.95□□□□□ -1.94
SSF2YDR312W PFK2P16862 959 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
SSF2YDR312W ERG8P24521 451 aa2.95□□□□□ -1.94
SSF2YDR312W DPB3P27344 201 aa2.95□□□□□ -1.94
SSF2YDR312W RGT1P32862 1170 aa2.95□□□□□ -1.94
SSF2YDR312W TEF4P36008 412 aaKnown RBP2.95□□□□□ -1.94
SSF2YDR312W IST3P40565 148 aaPredicted RBP2.95□□□□□ -1.94
SSF2YDR312W YGL036WP53185 909 aaPredicted RBP2.95□□□□□ -1.94
SSF2YDR312W YNR061CP53747 219 aa2.95□□□□□ -1.94
SSF2YDR312W YNL144CP53907 740 aa2.95□□□□□ -1.94
SSF2YDR312W YLR455WQ06188 304 aa2.95□□□□□ -1.94
SSF2YDR312W DSE3Q08729 430 aa2.95□□□□□ -1.94
SSF2YDR312W FRE3Q08905 711 aa2.95□□□□□ -1.94
SSF2YDR312W VCX1Q99385 411 aa2.95□□□□□ -1.94
SSF2YDR312W CAT8P39113 1433 aa2.95□□□□□ -1.94
SSF2YDR312W GEA1P47102 1408 aaPredicted RBP2.95□□□□□ -1.94
SSF2YDR312W CHO1P08456 276 aa2.94□□□□□ -1.94
SSF2YDR312W MRP2P10663 115 aaPredicted RBP2.94□□□□□ -1.94
SSF2YDR312W GUK1P15454 187 aaKnown RBP2.94□□□□□ -1.94
SSF2YDR312W TRX2P22803 104 aaKnown RBP2.94□□□□□ -1.94
SSF2YDR312W SRB5P32585 307 aa2.94□□□□□ -1.94
SSF2YDR312W NTR2P36118 322 aaPredicted RBP2.94□□□□□ -1.94
SSF2YDR312W UME6P39001 836 aa2.94□□□□□ -1.94
SSF2YDR312W PFK26P40433 827 aaKnown RBP2.94□□□□□ -1.94
SSF2YDR312W YML131WQ03102 365 aa2.94□□□□□ -1.94
SSF2YDR312W NUP188P52593 1655 aaKnown RBP2.94□□□□□ -1.94
SSF2YDR312W YCR043CP25361 127 aa2.93□□□□□ -1.94
SSF2YDR312W CNS1P33313 385 aa2.93□□□□□ -1.94
SSF2YDR312W SLC1P33333 303 aa2.93□□□□□ -1.94
SSF2YDR312W TFC3P34111 1160 aa2.93□□□□□ -1.94
SSF2YDR312W AAP1P37898 856 aaKnown RBP2.93□□□□□ -1.94
SSF2YDR312W AXL2P38928 823 aa2.93□□□□□ -1.94
SSF2YDR312W NPR2P39923 615 aa2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 49.2 ms