RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 GPATCH3Q96I76 525 aa6.99□□□□□ -1.29
ZNF440-201ENST00000304060 AATFQ9NY61 560 aaKnown RBP eCLIP6.99□□□□□ -1.29
ZNF440-201ENST00000304060 DDTLA6NHG4 134 aaPredicted RBP6.98□□□□□ -1.29
ZNF440-201ENST00000304060 MAP3K10Q02779 954 aa6.98□□□□□ -1.29
ZNF440-201ENST00000304060 GRB14Q14449 540 aa6.98□□□□□ -1.29
ZNF440-201ENST00000304060 GSE1Q14687 1217 aa6.98□□□□□ -1.29
ZNF440-201ENST00000304060 ALDH1L2Q3SY69 923 aa6.98□□□□□ -1.29
ZNF440-201ENST00000304060 ZBTB33Q86T24 672 aa6.98□□□□□ -1.29
ZNF440-201ENST00000304060 TINF2Q9BSI4 451 aa6.98□□□□□ -1.29
ZNF440-201ENST00000304060 PPP1R12CQ9BZL4 782 aa6.98□□□□□ -1.29
ZNF440-201ENST00000304060 PRKRIP1Q9H875 184 aaPredicted RBP6.98□□□□□ -1.29
ZNF440-201ENST00000304060 NDUFB9Q9Y6M9 179 aa6.98□□□□□ -1.29
ZNF440-201ENST00000304060 ATRNL1Q5VV63 1379 aa6.98□□□□□ -1.29
ZNF440-201ENST00000304060 ERCC3P19447 782 aa6.98□□□□□ -1.29
ZNF440-201ENST00000304060 ABHD16BQ9H3Z7 469 aa6.98□□□□□ -1.29
ZNF440-201ENST00000304060 MTMR7Q9Y216 660 aa6.98□□□□□ -1.29
ZNF440-201ENST00000304060 PHF20L1A8MW92 1017 aa6.98□□□□□ -1.29
ZNF440-201ENST00000304060 DUSP11O75319 330 aaKnown RBP6.98□□□□□ -1.29
ZNF440-201ENST00000304060 ATP2A2P16615 1042 aaKnown RBP6.98□□□□□ -1.29
ZNF440-201ENST00000304060 ICA1Q05084 483 aa6.98□□□□□ -1.29
ZNF440-201ENST00000304060 BMS1Q14692 1282 aaKnown RBP6.98□□□□□ -1.29
ZNF440-201ENST00000304060 TIGD5Q53EQ6 642 aa6.98□□□□□ -1.29
ZNF440-201ENST00000304060 FTSJ3Q8IY81 847 aaKnown RBP6.98□□□□□ -1.29
ZNF440-201ENST00000304060 CHURC1Q8WUH1 139 aa6.98□□□□□ -1.29
ZNF440-201ENST00000304060 SAMD11Q96NU1 681 aa6.98□□□□□ -1.29
ZNF440-201ENST00000304060 HIPK3Q9H422 1215 aa6.98□□□□□ -1.29
ZNF440-201ENST00000304060 COPRSQ9NQ92 184 aa6.98□□□□□ -1.29
ZNF440-201ENST00000304060 SAP30BPQ9UHR5 308 aaKnown RBP6.98□□□□□ -1.29
ZNF440-201ENST00000304060 COG6Q9Y2V7 657 aa6.98□□□□□ -1.29
ZNF440-201ENST00000304060 PFASO15067 1338 aa6.98□□□□□ -1.29
ZNF440-201ENST00000304060 PPP4CP60510 307 aa6.98□□□□□ -1.29
ZNF440-201ENST00000304060 IPO4Q8TEX9 1081 aaKnown RBP6.98□□□□□ -1.29
ZNF440-201ENST00000304060 EHD4Q9H223 541 aa6.98□□□□□ -1.29
ZNF440-201ENST00000304060 MKNK2Q9HBH9 465 aa6.98□□□□□ -1.29
ZNF440-201ENST00000304060 RBPJLQ9UBG7 517 aa6.98□□□□□ -1.29
ZNF440-201ENST00000304060 COL2A1P02458 1487 aaPredicted RBP6.97□□□□□ -1.29
ZNF440-201ENST00000304060 MAGEB6P1A0A0J9YX57 407 aa6.97□□□□□ -1.29
ZNF440-201ENST00000304060 LPXNO60711 386 aa6.97□□□□□ -1.29
ZNF440-201ENST00000304060 FGFR2P21802 821 aa6.97□□□□□ -1.29
ZNF440-201ENST00000304060 TERF1P54274 439 aa6.97□□□□□ -1.29
ZNF440-201ENST00000304060 TKFCQ3LXA3 575 aa6.97□□□□□ -1.29
ZNF440-201ENST00000304060 UTP14CQ5TAP6 766 aaKnown RBP6.97□□□□□ -1.29
ZNF440-201ENST00000304060 PHOSPHO2Q8TCD6 241 aa6.97□□□□□ -1.29
ZNF440-201ENST00000304060 TEX13BQ9BXU2 312 aa6.97□□□□□ -1.29
ZNF440-201ENST00000304060 NKX2-4Q9H2Z4 354 aa6.97□□□□□ -1.29
ZNF440-201ENST00000304060 KANSL2Q9H9L4 492 aa6.97□□□□□ -1.29
ZNF440-201ENST00000304060 ERC2O15083 957 aa6.97□□□□□ -1.29
ZNF440-201ENST00000304060 CYBAP13498 195 aa6.97□□□□□ -1.29
ZNF440-201ENST00000304060 CTGFP29279 349 aa6.97□□□□□ -1.29
ZNF440-201ENST00000304060 ACLYP53396 1101 aa6.97□□□□□ -1.29
ZNF440-201ENST00000304060 TRIM32Q13049 653 aa6.97□□□□□ -1.29
ZNF440-201ENST00000304060 ZNF444Q8N0Y2 327 aaPredicted RBP6.97□□□□□ -1.29
ZNF440-201ENST00000304060 KCTD17Q8N5Z5 321 aa6.97□□□□□ -1.29
ZNF440-201ENST00000304060 USP17L12C9JPN9 530 aa6.97□□□□□ -1.29
ZNF440-201ENST00000304060 USP17L21D6R901 530 aa6.97□□□□□ -1.29
ZNF440-201ENST00000304060 SMIM22K7EJ46 135 aa6.97□□□□□ -1.29
ZNF440-201ENST00000304060 ARVCFO00192 962 aa6.97□□□□□ -1.29
ZNF440-201ENST00000304060 TRAF1Q13077 416 aa6.97□□□□□ -1.29
ZNF440-201ENST00000304060 MKRN4PQ13434 485 aaPredicted RBP6.97□□□□□ -1.29
ZNF440-201ENST00000304060 GRIN2CQ14957 1233 aa6.97□□□□□ -1.29
ZNF440-201ENST00000304060 LHX8Q68G74 356 aa6.97□□□□□ -1.29
ZNF440-201ENST00000304060 LBX2Q6XYB7 198 aa6.97□□□□□ -1.29
ZNF440-201ENST00000304060 CCDC84Q86UT8 332 aaPredicted RBP6.97□□□□□ -1.29
ZNF440-201ENST00000304060 TMEM87AQ8NBN3 555 aa6.97□□□□□ -1.29
ZNF440-201ENST00000304060 MOV10L1Q9BXT6 1211 aaKnown RBP6.97□□□□□ -1.29
ZNF440-201ENST00000304060 NACAP1Q9BZK3 213 aa6.97□□□□□ -1.29
ZNF440-201ENST00000304060 MCM9Q9NXL9 1143 aa6.97□□□□□ -1.29
ZNF440-201ENST00000304060 LMCD1Q9NZU5 365 aa6.97□□□□□ -1.29
ZNF440-201ENST00000304060 CLCN1P35523 988 aa6.96□□□□□ -1.29
ZNF440-201ENST00000304060 PTPN5P54829 565 aa6.96□□□□□ -1.29
ZNF440-201ENST00000304060 CCL14Q16627 93 aa6.96□□□□□ -1.29
ZNF440-201ENST00000304060 CHST13Q8NET6 341 aa6.96□□□□□ -1.29
ZNF440-201ENST00000304060 PORCNQ9H237 461 aa6.96□□□□□ -1.29
ZNF440-201ENST00000304060 FSD2A1L4K1 749 aa6.96□□□□□ -1.3
ZNF440-201ENST00000304060 FAM196BA6NMK8 535 aa6.96□□□□□ -1.3
ZNF440-201ENST00000304060 VCAM1P19320 739 aa6.96□□□□□ -1.3
ZNF440-201ENST00000304060 RBM25P49756 843 aaKnown RBP6.96□□□□□ -1.3
ZNF440-201ENST00000304060 RASGRF1Q13972 1273 aa6.96□□□□□ -1.3
ZNF440-201ENST00000304060 ANO1Q5XXA6 986 aa6.96□□□□□ -1.3
ZNF440-201ENST00000304060 A0A1W2PQ45 241 aaPredicted RBP6.96□□□□□ -1.3
ZNF440-201ENST00000304060 A0A1W2PQY0 241 aa6.96□□□□□ -1.3
ZNF440-201ENST00000304060 IFIT2P09913 472 aaKnown RBP6.96□□□□□ -1.3
ZNF440-201ENST00000304060 NBPF7P0C2Y1 421 aaPredicted RBP6.96□□□□□ -1.3
ZNF440-201ENST00000304060 C9orf50Q5SZB4 431 aa6.96□□□□□ -1.3
ZNF440-201ENST00000304060 ZNF365Q70YC5 407 aa6.96□□□□□ -1.3
ZNF440-201ENST00000304060 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.96□□□□□ -1.3
ZNF440-201ENST00000304060 PDCL3Q9H2J4 239 aa6.96□□□□□ -1.3
ZNF440-201ENST00000304060 GPR108Q9NPR9 543 aa6.96□□□□□ -1.3
ZNF440-201ENST00000304060 MYH3P11055 1940 aa6.96□□□□□ -1.3
ZNF440-201ENST00000304060 HOXD11P31277 338 aaPredicted RBP6.95□□□□□ -1.3
ZNF440-201ENST00000304060 CPT1AP50416 773 aa6.95□□□□□ -1.3
ZNF440-201ENST00000304060 MOGSQ13724 837 aa6.95□□□□□ -1.3
ZNF440-201ENST00000304060 SNX17Q15036 470 aa6.95□□□□□ -1.3
ZNF440-201ENST00000304060 ALYREFQ86V81 257 aaKnown RBP6.95□□□□□ -1.3
ZNF440-201ENST00000304060 ZNF710Q8N1W2 664 aa6.95□□□□□ -1.3
ZNF440-201ENST00000304060 DLG5Q8TDM6 1919 aa6.95□□□□□ -1.3
ZNF440-201ENST00000304060 DSG3P32926 999 aa6.95□□□□□ -1.3
ZNF440-201ENST00000304060 FAM47AQ5JRC9 791 aa6.95□□□□□ -1.3
ZNF440-201ENST00000304060 DNAJC2Q99543 621 aaKnown RBP6.95□□□□□ -1.3
ZNF440-201ENST00000304060 PRR33A8MZF0 331 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms