RNA–Protein interactions for RNA: YPR010C

RPA135, Transcript of RNA polymerase I second largest subunit A135, yeastyeast

Gene RPA135, Length 3,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA135YPR010C ARG2P40360 574 aa3.4□□□□□ -1.87
RPA135YPR010C SUM1P46676 1062 aa3.4□□□□□ -1.87
RPA135YPR010C POL31P46957 487 aa3.4□□□□□ -1.87
RPA135YPR010C MDE1P47095 244 aa3.4□□□□□ -1.87
RPA135YPR010C ILM1P47155 203 aa3.4□□□□□ -1.87
RPA135YPR010C SRB7P47822 140 aa3.4□□□□□ -1.87
RPA135YPR010C TAF6P53040 516 aa3.4□□□□□ -1.87
RPA135YPR010C OSH6Q02201 448 aa3.4□□□□□ -1.87
RPA135YPR010C RLI1Q03195 608 aaKnown RBP3.4□□□□□ -1.87
RPA135YPR010C GTB1Q04924 702 aa3.4□□□□□ -1.87
RPA135YPR010C DIS3Q08162 1001 aaKnown RBP3.4□□□□□ -1.87
RPA135YPR010C YVC1Q12324 675 aa3.4□□□□□ -1.87
RPA135YPR010C PUT4P15380 627 aa3.39□□□□□ -1.87
RPA135YPR010C ADE2P21264 571 aaKnown RBP3.39□□□□□ -1.87
RPA135YPR010C PHO87P25360 923 aa3.39□□□□□ -1.87
RPA135YPR010C POT1P27796 417 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
RPA135YPR010C MSC7P38694 644 aa3.39□□□□□ -1.87
RPA135YPR010C PFK26P40433 827 aaKnown RBP3.39□□□□□ -1.87
RPA135YPR010C IRR1P40541 1150 aa3.39□□□□□ -1.87
RPA135YPR010C MAD3P47074 515 aa3.39□□□□□ -1.87
RPA135YPR010C AIF1P52923 378 aa3.39□□□□□ -1.87
RPA135YPR010C TAF11Q04226 346 aa3.39□□□□□ -1.87
RPA135YPR010C RIF2Q06208 395 aa3.39□□□□□ -1.87
RPA135YPR010C ATG26Q06321 1198 aa3.39□□□□□ -1.87
RPA135YPR010C YLR352WQ06479 807 aa3.39□□□□□ -1.87
RPA135YPR010C CMS1Q07897 291 aaKnown RBP3.39□□□□□ -1.87
RPA135YPR010C YPR202WQ08993 238 aa3.39□□□□□ -1.87
RPA135YPR010C SPE3Q12074 293 aaKnown RBP3.39□□□□□ -1.87
RPA135YPR010C MCD1Q12158 566 aa3.39□□□□□ -1.87
RPA135YPR010C SVS1Q12254 260 aa3.39□□□□□ -1.87
RPA135YPR010C SEM1O94742 89 aa3.39□□□□□ -1.87
RPA135YPR010C RPS3P05750 240 aaKnown RBP3.39□□□□□ -1.87
RPA135YPR010C ILV2P07342 687 aaKnown RBP3.39□□□□□ -1.87
RPA135YPR010C GCD2P12754 651 aaPredicted RBP3.39□□□□□ -1.87
RPA135YPR010C PMR1P13586 950 aa3.39□□□□□ -1.87
RPA135YPR010C RED1P14291 827 aa3.39□□□□□ -1.87
RPA135YPR010C MET8P15807 274 aa3.39□□□□□ -1.87
RPA135YPR010C HEM15P16622 393 aa3.39□□□□□ -1.87
RPA135YPR010C CLN2P20438 545 aa3.39□□□□□ -1.87
RPA135YPR010C SSH4P32343 579 aa3.39□□□□□ -1.87
RPA135YPR010C PET112P33893 541 aa3.39□□□□□ -1.87
RPA135YPR010C YKR078WP36158 585 aaKnown RBP3.39□□□□□ -1.87
RPA135YPR010C SIF2P38262 535 aa3.39□□□□□ -1.87
RPA135YPR010C YBR259WP38338 688 aa3.39□□□□□ -1.87
RPA135YPR010C LRP1P38801 184 aaKnown RBP3.39□□□□□ -1.87
RPA135YPR010C SCS2P40075 244 aaKnown RBP3.39□□□□□ -1.87
RPA135YPR010C COG2P53271 262 aa3.39□□□□□ -1.87
RPA135YPR010C RSC4Q02206 625 aa3.39□□□□□ -1.87
RPA135YPR010C SKI8Q02793 397 aaPredicted RBP3.39□□□□□ -1.87
RPA135YPR010C GSF2Q04697 403 aaKnown RBP3.39□□□□□ -1.87
RPA135YPR010C THI73Q07904 523 aa3.39□□□□□ -1.87
RPA135YPR010C NRT1Q08485 598 aa3.39□□□□□ -1.87
RPA135YPR010C GNT1Q12096 491 aa3.39□□□□□ -1.87
RPA135YPR010C RGS2Q99188 309 aa3.39□□□□□ -1.87
RPA135YPR010C BEM2P39960 2167 aaKnown RBP3.39□□□□□ -1.87
RPA135YPR010C RPB4P20433 221 aaPredicted RBP3.39□□□□□ -1.87
RPA135YPR010C YCR099CP25657 155 aa3.39□□□□□ -1.87
RPA135YPR010C RAD14P28519 371 aa3.39□□□□□ -1.87
RPA135YPR010C MEI5P32489 222 aa3.39□□□□□ -1.87
RPA135YPR010C RAD5P32849 1169 aaPredicted RBP3.39□□□□□ -1.87
RPA135YPR010C PPE1P38796 400 aa3.39□□□□□ -1.87
RPA135YPR010C MON1P53129 644 aa3.39□□□□□ -1.87
RPA135YPR010C DUS1P53759 423 aaKnown RBP3.39□□□□□ -1.87
RPA135YPR010C CEG1Q01159 459 aaPredicted RBP3.39□□□□□ -1.87
RPA135YPR010C SPO19Q03029 223 aa3.39□□□□□ -1.87
RPA135YPR010C TRS31Q03337 283 aa3.39□□□□□ -1.87
RPA135YPR010C NSE5Q03718 556 aa3.39□□□□□ -1.87
RPA135YPR010C SEC10Q06245 871 aa3.39□□□□□ -1.87
RPA135YPR010C YPR172WQ06608 200 aa3.39□□□□□ -1.87
RPA135YPR010C COX5AP00424 153 aa3.38□□□□□ -1.87
RPA135YPR010C INH1P01097 85 aa3.38□□□□□ -1.87
RPA135YPR010C HRR25P29295 494 aaKnown RBP3.38□□□□□ -1.87
RPA135YPR010C PHA2P32452 334 aa3.38□□□□□ -1.87
RPA135YPR010C GDA1P32621 518 aa3.38□□□□□ -1.87
RPA135YPR010C COY1P34237 679 aa3.38□□□□□ -1.87
RPA135YPR010C YBL029WP38201 376 aa3.38□□□□□ -1.87
RPA135YPR010C YSW1P38280 609 aa3.38□□□□□ -1.87
RPA135YPR010C YBR184WP38299 523 aa3.38□□□□□ -1.87
RPA135YPR010C TDP1P38319 544 aa3.38□□□□□ -1.87
RPA135YPR010C DHH1P39517 506 aaKnown RBP3.38□□□□□ -1.87
RPA135YPR010C PRM9P39551 298 aa3.38□□□□□ -1.87
RPA135YPR010C UTP18P40362 594 aaPredicted RBP3.38□□□□□ -1.87
RPA135YPR010C CHS6P40955 746 aa3.38□□□□□ -1.87
RPA135YPR010C SPO74P45819 413 aa3.38□□□□□ -1.87
RPA135YPR010C EFM5P53200 248 aaKnown RBP3.38□□□□□ -1.87
RPA135YPR010C HER2Q03557 464 aa3.38□□□□□ -1.87
RPA135YPR010C YMR155WQ03795 547 aa3.38□□□□□ -1.87
RPA135YPR010C YLR177WQ06251 628 aa3.38□□□□□ -1.87
RPA135YPR010C HOS1Q12214 470 aa3.38□□□□□ -1.87
RPA135YPR010C TOR2P32600 2474 aaKnown RBP3.38□□□□□ -1.87
RPA135YPR010C ACC1Q00955 2233 aaKnown RBP3.38□□□□□ -1.87
RPA135YPR010C FIG2P25653 1609 aa3.38□□□□□ -1.87
RPA135YPR010C FUR4P05316 633 aaKnown RBP3.38□□□□□ -1.87
RPA135YPR010C SEC53P07283 254 aaKnown RBP3.38□□□□□ -1.87
RPA135YPR010C VMA8P32610 256 aaKnown RBP3.38□□□□□ -1.87
RPA135YPR010C SDH3P33421 198 aa3.38□□□□□ -1.87
RPA135YPR010C ETP1P38748 585 aaKnown RBP3.38□□□□□ -1.87
RPA135YPR010C FSH1P38777 243 aaKnown RBP3.38□□□□□ -1.87
RPA135YPR010C PIK1P39104 1066 aa3.38□□□□□ -1.87
RPA135YPR010C TES1P41903 349 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms