RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W TDP1P38319 544 aa2.23□□□□□ -2.05
SEC16YPL085W YHL049CP38722 271 aa2.23□□□□□ -2.05
SEC16YPL085W TIF11P38912 153 aaKnown RBP2.23□□□□□ -2.05
SEC16YPL085W RCY1P39531 840 aa2.23□□□□□ -2.05
SEC16YPL085W YEL075CP39972 122 aa2.23□□□□□ -2.05
SEC16YPL085W YER189WP40104 122 aa2.23□□□□□ -2.05
SEC16YPL085W PSF2P40359 213 aa2.23□□□□□ -2.05
SEC16YPL085W ATM1P40416 690 aa2.23□□□□□ -2.05
SEC16YPL085W YFL064CP43540 174 aa2.23□□□□□ -2.05
SEC16YPL085W AIP1P46680 615 aaKnown RBP2.23□□□□□ -2.05
SEC16YPL085W YGL036WP53185 909 aaPredicted RBP2.23□□□□□ -2.05
SEC16YPL085W YSA1Q01976 231 aa2.23□□□□□ -2.05
SEC16YPL085W TAF9Q05027 157 aa2.23□□□□□ -2.05
SEC16YPL085W YPR114WQ06107 315 aa2.23□□□□□ -2.05
SEC16YPL085W YBL111CQ3E7Y5 667 aa2.23□□□□□ -2.05
SEC16YPL085W TRS33Q99394 268 aa2.23□□□□□ -2.05
SEC16YPL085W YEL076C-AP0CX16 216 aa2.23□□□□□ -2.05
SEC16YPL085W YLR464WP0CX17 216 aa2.23□□□□□ -2.05
SEC16YPL085W RPS6AP0CX37 236 aaKnown RBP2.23□□□□□ -2.05
SEC16YPL085W RPS6BP0CX38 236 aaPredicted RBP2.23□□□□□ -2.05
SEC16YPL085W HOM3P10869 527 aa2.23□□□□□ -2.05
SEC16YPL085W URA4P20051 364 aa2.23□□□□□ -2.05
SEC16YPL085W AMS1P22855 1083 aa2.23□□□□□ -2.05
SEC16YPL085W RVS161P25343 265 aaKnown RBP2.23□□□□□ -2.05
SEC16YPL085W YJU2P28320 278 aaPredicted RBP2.23□□□□□ -2.05
SEC16YPL085W URA10P30402 227 aa2.23□□□□□ -2.05
SEC16YPL085W GUT1P32190 709 aa2.23□□□□□ -2.05
SEC16YPL085W MUD1P32605 298 aaKnown RBP2.23□□□□□ -2.05
SEC16YPL085W STE5P32917 917 aa2.23□□□□□ -2.05
SEC16YPL085W DOM34P33309 386 aa2.23□□□□□ -2.05
SEC16YPL085W HEK2P38199 381 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05 RIP-Chip
SEC16YPL085W POP8P38208 133 aa2.23□□□□□ -2.05
SEC16YPL085W MED8P38304 223 aa2.23□□□□□ -2.05
SEC16YPL085W YEL076CP39971 216 aa2.23□□□□□ -2.05
SEC16YPL085W ISC1P40015 477 aaKnown RBP2.23□□□□□ -2.05
SEC16YPL085W DOT6P40059 670 aaKnown RBP2.23□□□□□ -2.05
SEC16YPL085W YIL161WP40449 235 aaKnown RBP2.23□□□□□ -2.05
SEC16YPL085W LSC2P53312 427 aa2.23□□□□□ -2.05
SEC16YPL085W YNL260CP53846 198 aa2.23□□□□□ -2.05
SEC16YPL085W YML131WQ03102 365 aa2.23□□□□□ -2.05
SEC16YPL085W URC2Q04411 772 aa2.23□□□□□ -2.05
SEC16YPL085W HAP4P14064 554 aa2.23□□□□□ -2.05
SEC16YPL085W RNA14P25298 677 aaKnown RBP2.23□□□□□ -2.05
SEC16YPL085W SSO1P32867 290 aa2.23□□□□□ -2.05
SEC16YPL085W TKL2P33315 681 aa2.23□□□□□ -2.05
SEC16YPL085W LHS1P36016 881 aa2.23□□□□□ -2.05
SEC16YPL085W DID4P36108 232 aa2.23□□□□□ -2.05
SEC16YPL085W FES1P38260 290 aa2.23□□□□□ -2.05
SEC16YPL085W CKB2P38930 258 aa2.23□□□□□ -2.05
SEC16YPL085W YER130CP39959 443 aa2.23□□□□□ -2.05
SEC16YPL085W YMR134WP40207 237 aa2.23□□□□□ -2.05
SEC16YPL085W PRM2P40534 656 aa2.23□□□□□ -2.05
SEC16YPL085W YIL001WP40560 513 aa2.23□□□□□ -2.05
SEC16YPL085W NOP19P53317 196 aaPredicted RBP2.23□□□□□ -2.05
SEC16YPL085W IPI3P53877 555 aa2.23□□□□□ -2.05
SEC16YPL085W CIK1Q01649 594 aa2.23□□□□□ -2.05
SEC16YPL085W YPL071CQ02864 156 aa2.23□□□□□ -2.05
SEC16YPL085W INP2Q03824 705 aa2.23□□□□□ -2.05
SEC16YPL085W SPO71Q03868 1245 aa2.23□□□□□ -2.05
SEC16YPL085W YML082WQ04533 649 aaKnown RBP2.23□□□□□ -2.05
SEC16YPL085W GPN3Q06543 272 aa2.23□□□□□ -2.05
SEC16YPL085W THI20Q08224 551 aa2.23□□□□□ -2.05
SEC16YPL085W TUM1Q08686 304 aaKnown RBP2.23□□□□□ -2.05
SEC16YPL085W YOR019WQ99248 730 aa2.23□□□□□ -2.05
SEC16YPL085W PRC1P00729 532 aa2.22□□□□□ -2.05
SEC16YPL085W GAL10P04397 699 aa2.22□□□□□ -2.05
SEC16YPL085W PRP9P19736 530 aaKnown RBP2.22□□□□□ -2.05
SEC16YPL085W DBR1P24309 405 aaKnown RBP2.22□□□□□ -2.05
SEC16YPL085W KIN82P25341 720 aa2.22□□□□□ -2.05
SEC16YPL085W PRP19P32523 503 aaKnown RBP2.22□□□□□ -2.05
SEC16YPL085W PMT1P33775 817 aa2.22□□□□□ -2.05
SEC16YPL085W ELF1P36053 145 aa2.22□□□□□ -2.05
SEC16YPL085W MRPL37P36532 105 aa2.22□□□□□ -2.05
SEC16YPL085W YEN1P40028 759 aa2.22□□□□□ -2.05
SEC16YPL085W YER158CP40095 573 aa2.22□□□□□ -2.05
SEC16YPL085W SAD1P43589 448 aa2.22□□□□□ -2.05
SEC16YPL085W BIT61P47041 543 aa2.22□□□□□ -2.05
SEC16YPL085W DIA3P52290 468 aa2.22□□□□□ -2.05
SEC16YPL085W CWC23P52868 283 aaPredicted RBP2.22□□□□□ -2.05
SEC16YPL085W UBP2Q01476 1272 aa2.22□□□□□ -2.05
SEC16YPL085W YPL062WQ02781 134 aa2.22□□□□□ -2.05
SEC16YPL085W SPP1Q03012 353 aa2.22□□□□□ -2.05
SEC16YPL085W HER2Q03557 464 aa2.22□□□□□ -2.05
SEC16YPL085W GIS4Q04233 774 aa2.22□□□□□ -2.05
SEC16YPL085W PRP11Q07350 266 aaPredicted RBP2.22□□□□□ -2.05
SEC16YPL085W YOR238WQ08634 303 aa2.22□□□□□ -2.05
SEC16YPL085W YDL206WQ12424 762 aa2.22□□□□□ -2.05
SEC16YPL085W YCL012CQ8J0M4 134 aa2.22□□□□□ -2.05
SEC16YPL085W ARG3P05150 338 aa2.22□□□□□ -2.05
SEC16YPL085W GAL11P19659 1081 aa2.22□□□□□ -2.05
SEC16YPL085W SRB2P34162 210 aa2.22□□□□□ -2.05
SEC16YPL085W YKL050CP35736 922 aa2.22□□□□□ -2.05
SEC16YPL085W SWH1P35845 1188 aa2.22□□□□□ -2.05
SEC16YPL085W NUP60P39705 539 aa2.22□□□□□ -2.05
SEC16YPL085W MRX1P40050 688 aa2.22□□□□□ -2.05
SEC16YPL085W MOB1P40484 314 aa2.22□□□□□ -2.05
SEC16YPL085W MSS2P40990 351 aa2.22□□□□□ -2.05
SEC16YPL085W SBE2P42223 864 aaKnown RBP2.22□□□□□ -2.05
SEC16YPL085W AGX1P43567 385 aa2.22□□□□□ -2.05
SEC16YPL085W NOP9P47077 666 aaKnown RBP2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms