RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W ROY1Q04847 553 aa2.02□□□□□ -2.09
HER1YOR227W YMR321CQ04898 105 aa2.02□□□□□ -2.09
HER1YOR227W CRR1Q05790 422 aa2.02□□□□□ -2.09
HER1YOR227W MSC3Q05812 728 aa2.02□□□□□ -2.09
HER1YOR227W MCP2Q06567 569 aa2.02□□□□□ -2.09
HER1YOR227W AIM6Q07716 390 aa2.02□□□□□ -2.09
HER1YOR227W RRT8Q08219 342 aa2.02□□□□□ -2.09
HER1YOR227W TY2A-BQ12260 438 aa2.02□□□□□ -2.09
HER1YOR227W TY2A-OR2Q12293 438 aa2.02□□□□□ -2.09
HER1YOR227W SFI1Q12369 946 aa2.02□□□□□ -2.09
HER1YOR227W TY2A-DR1Q12392 438 aa2.02□□□□□ -2.09
HER1YOR227W ISA2Q12425 185 aa2.02□□□□□ -2.09
HER1YOR227W TY2A-OR1Q12439 438 aa2.02□□□□□ -2.09
HER1YOR227W SFG1Q12507 346 aa2.02□□□□□ -2.09
HER1YOR227W TY2A-DR3Q99303 438 aa2.02□□□□□ -2.09
HER1YOR227W RAD50P12753 1312 aa2.02□□□□□ -2.09
HER1YOR227W RNA1P11745 407 aaKnown RBP2.02□□□□□ -2.09
HER1YOR227W PRP4P20053 465 aaKnown RBP2.02□□□□□ -2.09
HER1YOR227W VPS33P20795 691 aa2.02□□□□□ -2.09
HER1YOR227W SPB1P25582 841 aaPredicted RBP2.02□□□□□ -2.09
HER1YOR227W MDL2P33311 773 aa2.02□□□□□ -2.09
HER1YOR227W BUD2P33314 1104 aa2.02□□□□□ -2.09
HER1YOR227W ECM21P38167 1117 aaKnown RBP2.02□□□□□ -2.09
HER1YOR227W PEX32P38292 413 aa2.02□□□□□ -2.09
HER1YOR227W UTP9P38882 575 aaKnown RBP2.02□□□□□ -2.09
HER1YOR227W BFR1P38934 470 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
HER1YOR227W SSP120P39931 234 aaKnown RBP2.02□□□□□ -2.09
HER1YOR227W ZIM17P42844 174 aa2.02□□□□□ -2.09
HER1YOR227W NUP85P46673 744 aa2.02□□□□□ -2.09
HER1YOR227W EFM3P47163 339 aa2.02□□□□□ -2.09
HER1YOR227W SAP4P53036 818 aa2.02□□□□□ -2.09
HER1YOR227W COG1P53079 417 aa2.02□□□□□ -2.09
HER1YOR227W PDR16P53860 351 aaKnown RBP2.02□□□□□ -2.09
HER1YOR227W YKR011CQ02209 353 aa2.02□□□□□ -2.09
HER1YOR227W VTC3Q02725 835 aa2.02□□□□□ -2.09
HER1YOR227W ECM18Q04623 453 aa2.02□□□□□ -2.09
HER1YOR227W RCO1Q04779 684 aa2.02□□□□□ -2.09
HER1YOR227W MRD1Q06106 887 aaKnown RBP2.02□□□□□ -2.09
HER1YOR227W HRK1Q08732 759 aaKnown RBP2.02□□□□□ -2.09
HER1YOR227W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
HER1YOR227W ATG11Q12527 1178 aa2.02□□□□□ -2.09
HER1YOR227W CPR2P23285 205 aa2.02□□□□□ -2.09
HER1YOR227W PRP28P23394 588 aa2.02□□□□□ -2.09
HER1YOR227W ERG8P24521 451 aa2.02□□□□□ -2.09
HER1YOR227W TEF4P36008 412 aaKnown RBP2.02□□□□□ -2.09
HER1YOR227W GPT2P36148 743 aa2.02□□□□□ -2.09
HER1YOR227W NTC20P38302 140 aaPredicted RBP2.02□□□□□ -2.09
HER1YOR227W ARB1P40024 610 aaKnown RBP2.02□□□□□ -2.09
HER1YOR227W SER3P40054 469 aa2.02□□□□□ -2.09
HER1YOR227W ARF3P40994 183 aaRIP-Chip data2.02□□□□□ -2.09not detected
HER1YOR227W GSM1P42950 618 aa2.02□□□□□ -2.09
HER1YOR227W ECM27P47144 725 aa2.02□□□□□ -2.09
HER1YOR227W NIT3P49954 291 aa2.02□□□□□ -2.09
HER1YOR227W UBP15P50101 1230 aa2.02□□□□□ -2.09
HER1YOR227W FMS1P50264 508 aa2.02□□□□□ -2.09
HER1YOR227W ALT2P52892 507 aa2.02□□□□□ -2.09
HER1YOR227W VBA4Q04602 768 aaKnown RBP2.02□□□□□ -2.09
HER1YOR227W KAP95Q06142 861 aaKnown RBP2.02□□□□□ -2.09
HER1YOR227W JIP3O13555 125 aa2.01□□□□□ -2.09
HER1YOR227W DIF1O13577 133 aa2.01□□□□□ -2.09
HER1YOR227W STF1P01098 86 aa2.01□□□□□ -2.09
HER1YOR227W CUP1-1P0CX80 61 aa2.01□□□□□ -2.09
HER1YOR227W CUP1-2P0CX81 61 aa2.01□□□□□ -2.09
HER1YOR227W HPR1P17629 752 aaKnown RBP2.01□□□□□ -2.09
HER1YOR227W BUD14P27637 709 aa2.01□□□□□ -2.09
HER1YOR227W SMI1P32566 505 aa2.01□□□□□ -2.09
HER1YOR227W RPT3P33298 428 aaKnown RBP2.01□□□□□ -2.09
HER1YOR227W SET5P38890 526 aaKnown RBP2.01□□□□□ -2.09
HER1YOR227W YDR089WP38966 869 aa2.01□□□□□ -2.09
HER1YOR227W AAD10P47182 288 aa2.01□□□□□ -2.09
HER1YOR227W MRPS35P53292 345 aa2.01□□□□□ -2.09
HER1YOR227W STP3Q05937 343 aa2.01□□□□□ -2.09
HER1YOR227W SPH1Q06160 661 aa2.01□□□□□ -2.09
HER1YOR227W YDL073WQ07454 984 aa2.01□□□□□ -2.09
HER1YOR227W RSB1Q08417 382 aa2.01□□□□□ -2.09
HER1YOR227W SVS1Q12254 260 aa2.01□□□□□ -2.09
HER1YOR227W RAD61Q99359 647 aa2.01□□□□□ -2.09
HER1YOR227W SAM35P14693 329 aa2.01□□□□□ -2.09
HER1YOR227W NFS1P25374 497 aa2.01□□□□□ -2.09
HER1YOR227W GEX1P25596 615 aa2.01□□□□□ -2.09
HER1YOR227W YSC84P32793 468 aa2.01□□□□□ -2.09
HER1YOR227W VPS17P32913 551 aa2.01□□□□□ -2.09
HER1YOR227W PIM1P36775 1133 aa2.01□□□□□ -2.09
HER1YOR227W FSH1P38777 243 aaKnown RBP2.01□□□□□ -2.09
HER1YOR227W AIR1P40507 360 aaKnown RBP2.01□□□□□ -2.09
HER1YOR227W BIO3P50277 480 aa2.01□□□□□ -2.09
HER1YOR227W NUP84P52891 726 aa2.01□□□□□ -2.09
HER1YOR227W VPS4P52917 437 aa2.01□□□□□ -2.09
HER1YOR227W YVH1Q02256 364 aaKnown RBP2.01□□□□□ -2.09
HER1YOR227W YPL034WQ03083 165 aa2.01□□□□□ -2.09
HER1YOR227W GYL1Q04322 720 aa2.01□□□□□ -2.09
HER1YOR227W FUS2Q05670 677 aa2.01□□□□□ -2.09
HER1YOR227W VPS36Q06696 566 aa2.01□□□□□ -2.09
HER1YOR227W CRD1Q07560 283 aa2.01□□□□□ -2.09
HER1YOR227W TY3A-GQ12173 290 aa2.01□□□□□ -2.09
HER1YOR227W YLL054CQ12244 843 aa2.01□□□□□ -2.09
HER1YOR227W YBR126W-AQ8TGU7 68 aa2.01□□□□□ -2.09
HER1YOR227W TY3A-IQ99219 290 aa2.01□□□□□ -2.09
HER1YOR227W UBR1P19812 1950 aa2.01□□□□□ -2.09
HER1YOR227W TUB3P09734 445 aaKnown RBP2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms