RNA–Protein interactions for RNA: YOR068C

VAM10, Transcript of Protein involved in vacuole morphogenesis, yeast

Gene VAM10, Length 345 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM10	YOR068C	IMA1	P53051	589 aa		3.56	□□□□□ -1.84
VAM10	YOR068C	VPS73	P53142	486 aa	Known RBP	3.56	□□□□□ -1.84
VAM10	YOR068C	BUD17	P53727	317 aa		3.56	□□□□□ -1.84
VAM10	YOR068C	ADA2	Q02336	434 aa		3.56	□□□□□ -1.84
VAM10	YOR068C	TRS31	Q03337	283 aa		3.56	□□□□□ -1.84
VAM10	YOR068C	USA1	Q03714	838 aa		3.56	□□□□□ -1.84
VAM10	YOR068C	SYF1	Q04048	859 aa	Predicted RBP	3.56	□□□□□ -1.84
VAM10	YOR068C	ATG26	Q06321	1198 aa		3.56	□□□□□ -1.84
VAM10	YOR068C	ARR1	Q06596	294 aa		3.56	□□□□□ -1.84
VAM10	YOR068C	RTC5	Q12108	567 aa	Known RBP	3.56	□□□□□ -1.84
VAM10	YOR068C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	3.56	□□□□□ -1.84	not detected
VAM10	YOR068C	SUT2	Q12286	268 aa		3.56	□□□□□ -1.84
VAM10	YOR068C	FUM1	P08417	488 aa	Known RBP	3.55	□□□□□ -1.84
VAM10	YOR068C	CDC43	P18898	376 aa		3.55	□□□□□ -1.84
VAM10	YOR068C	SWI4	P25302	1093 aa	Known RBP	3.55	□□□□□ -1.84
VAM10	YOR068C	DMC1	P25453	334 aa		3.55	□□□□□ -1.84
VAM10	YOR068C	CMK1	P27466	446 aa	Known RBP	3.55	□□□□□ -1.84
VAM10	YOR068C	BUD14	P27637	709 aa		3.55	□□□□□ -1.84
VAM10	YOR068C	PRP45	P28004	379 aa	Predicted RBP	3.55	□□□□□ -1.84
VAM10	YOR068C	CAP1	P28495	268 aa	Known RBP	3.55	□□□□□ -1.84
VAM10	YOR068C	KRE6	P32486	720 aa		3.55	□□□□□ -1.84
VAM10	YOR068C	FRD1	P32614	470 aa	Known RBP	3.55	□□□□□ -1.84
VAM10	YOR068C	EMP70	P32802	667 aa		3.55	□□□□□ -1.84
VAM10	YOR068C	UIP5	P36137	443 aa		3.55	□□□□□ -1.84
VAM10	YOR068C	TDP1	P38319	544 aa		3.55	□□□□□ -1.84
VAM10	YOR068C	DED81	P38707	554 aa	Known RBP	3.55	□□□□□ -1.84
VAM10	YOR068C	YEL068C	P39977	110 aa		3.55	□□□□□ -1.84
VAM10	YOR068C	NOP16	P40007	231 aa	Known RBP	3.55	□□□□□ -1.84
VAM10	YOR068C	YER010C	P40011	234 aa		3.55	□□□□□ -1.84
VAM10	YOR068C	POL31	P46957	487 aa		3.55	□□□□□ -1.84
VAM10	YOR068C	YJL055W	P47044	245 aa		3.55	□□□□□ -1.84
VAM10	YOR068C	CTF18	P49956	741 aa		3.55	□□□□□ -1.84
VAM10	YOR068C	COS12	P53053	380 aa		3.55	□□□□□ -1.84
VAM10	YOR068C	LSC1	P53598	329 aa	Known RBP	3.55	□□□□□ -1.84
VAM10	YOR068C	YNL144C	P53907	740 aa		3.55	□□□□□ -1.84
VAM10	YOR068C	DAK1	P54838	584 aa	Known RBP	3.55	□□□□□ -1.84
VAM10	YOR068C	PRP42	Q03776	544 aa	Known RBP	3.55	□□□□□ -1.84
VAM10	YOR068C	TDA9	Q04545	1251 aa		3.55	□□□□□ -1.84
VAM10	YOR068C	DPB4	Q04603	196 aa	Known RBP	3.55	□□□□□ -1.84
VAM10	YOR068C	ERV41	Q04651	352 aa		3.55	□□□□□ -1.84
VAM10	YOR068C	ARP9	Q05123	467 aa		3.55	□□□□□ -1.84
VAM10	YOR068C	MRD1	Q06106	887 aa	Known RBP	3.55	□□□□□ -1.84
VAM10	YOR068C	PHO92	Q06390	306 aa		3.55	□□□□□ -1.84
VAM10	YOR068C	YLR302C	O13544	120 aa		3.54	□□□□□ -1.84
VAM10	YOR068C	PUT4	P15380	627 aa		3.54	□□□□□ -1.84
VAM10	YOR068C	VPS3	P23643	1011 aa		3.54	□□□□□ -1.84
VAM10	YOR068C	GRR1	P24814	1151 aa		3.54	□□□□□ -1.84
VAM10	YOR068C	LCB1	P25045	558 aa	Known RBP	3.54	□□□□□ -1.84
VAM10	YOR068C	RPS7A	P26786	190 aa	Known RBP	3.54	□□□□□ -1.84
VAM10	YOR068C	CNE1	P27825	502 aa		3.54	□□□□□ -1.84
VAM10	YOR068C	ITR1	P30605	584 aa		3.54	□□□□□ -1.84
VAM10	YOR068C	PRE2	P30656	287 aa	Known RBP	3.54	□□□□□ -1.84
VAM10	YOR068C	ARP2	P32381	391 aa	Known RBP	3.54	□□□□□ -1.84
VAM10	YOR068C	NIP1	P32497	812 aa	Known RBP	3.54	□□□□□ -1.84
VAM10	YOR068C	VPS17	P32913	551 aa		3.54	□□□□□ -1.84
VAM10	YOR068C	PPQ1	P32945	549 aa		3.54	□□□□□ -1.84
VAM10	YOR068C	MDL1	P33310	695 aa		3.54	□□□□□ -1.84
VAM10	YOR068C	YKT6	P36015	200 aa	Known RBP	3.54	□□□□□ -1.84
VAM10	YOR068C	MUP3	P38734	546 aa		3.54	□□□□□ -1.84
VAM10	YOR068C	LNP1	P38878	278 aa		3.54	□□□□□ -1.84
VAM10	YOR068C	IST3	P40565	148 aa	Predicted RBP	3.54	□□□□□ -1.84
VAM10	YOR068C	MKT1	P40850	830 aa	Known RBP	3.54	□□□□□ -1.84
VAM10	YOR068C	AXL1	P40851	1208 aa		3.54	□□□□□ -1.84
VAM10	YOR068C	THI6	P41835	540 aa		3.54	□□□□□ -1.84
VAM10	YOR068C	YRB1	P41920	201 aa	Known RBP	3.54	□□□□□ -1.84
VAM10	YOR068C	QRI1	P43123	477 aa	Known RBP	3.54	□□□□□ -1.84
VAM10	YOR068C	CGR1	P53188	120 aa		3.54	□□□□□ -1.84
VAM10	YOR068C	LSB1	P53281	241 aa		3.54	□□□□□ -1.84
VAM10	YOR068C	RTC4	P53850	401 aa		3.54	□□□□□ -1.84
VAM10	YOR068C	NGL2	Q03264	515 aa	Known RBP	3.54	□□□□□ -1.84
VAM10	YOR068C	INP2	Q03824	705 aa		3.54	□□□□□ -1.84
VAM10	YOR068C	CRN1	Q06440	651 aa		3.54	□□□□□ -1.84
VAM10	YOR068C	CUE5	Q08412	411 aa	Known RBP	3.54	□□□□□ -1.84
VAM10	YOR068C	YPL216W	Q08964	1102 aa		3.54	□□□□□ -1.84
VAM10	YOR068C	COX17	Q12287	69 aa		3.54	□□□□□ -1.84
VAM10	YOR068C	MDM20	Q12387	796 aa	Known RBP	3.54	□□□□□ -1.84
VAM10	YOR068C	SKM1	Q12469	655 aa		3.54	□□□□□ -1.84
VAM10	YOR068C	IKI3	Q06706	1349 aa	Known RBP	3.53	□□□□□ -1.84
VAM10	YOR068C	TPK2	P06245	380 aa		3.53	□□□□□ -1.84
VAM10	YOR068C	CDC16	P09798	840 aa		3.53	□□□□□ -1.84
VAM10	YOR068C	PET122	P10355	254 aa		3.53	□□□□□ -1.84
VAM10	YOR068C	STE12	P13574	688 aa		3.53	□□□□□ -1.84
VAM10	YOR068C	GUK1	P15454	187 aa	Known RBP	3.53	□□□□□ -1.84
VAM10	YOR068C	PDX1	P16451	410 aa		3.53	□□□□□ -1.84
VAM10	YOR068C	SAN1	P22470	610 aa		3.53	□□□□□ -1.84
VAM10	YOR068C	VPS34	P22543	875 aa		3.53	□□□□□ -1.84
VAM10	YOR068C	PRE8	P23639	250 aa		3.53	□□□□□ -1.84
VAM10	YOR068C	MNE1	P24720	663 aa		3.53	□□□□□ -1.84
VAM10	YOR068C	HSP104	P31539	908 aa	Known RBP	3.53	□□□□□ -1.84
VAM10	YOR068C	SMI1	P32566	505 aa		3.53	□□□□□ -1.84
VAM10	YOR068C	PAH1	P32567	862 aa		3.53	□□□□□ -1.84
VAM10	YOR068C	MUD2	P36084	527 aa	Known RBP	3.53	□□□□□ -1.84
VAM10	YOR068C	ECM4	P36156	370 aa		3.53	□□□□□ -1.84
VAM10	YOR068C	YBR138C	P38277	524 aa		3.53	□□□□□ -1.84
VAM10	YOR068C	IFA38	P38286	347 aa		3.53	□□□□□ -1.84
VAM10	YOR068C	RFC1	P38630	861 aa	Known RBP	3.53	□□□□□ -1.84
VAM10	YOR068C	AXL2	P38928	823 aa		3.53	□□□□□ -1.84
VAM10	YOR068C	YHB1	P39676	399 aa	Known RBP	3.53	□□□□□ -1.84
VAM10	YOR068C	GDI1	P39958	451 aa	Known RBP	3.53	□□□□□ -1.84
VAM10	YOR068C	BST1	P43571	1029 aa		3.53	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms