RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W TEL2P53038 688 aa3.26□□□□□ -1.89
MSH2YOL090W RAI1P53063 387 aaKnown RBP3.26□□□□□ -1.89
MSH2YOL090W TNA1P53322 534 aa3.26□□□□□ -1.89
MSH2YOL090W TRS31Q03337 283 aa3.26□□□□□ -1.89
MSH2YOL090W RRT8Q08219 342 aa3.26□□□□□ -1.89
MSH2YOL090W TMA16Q08687 178 aa3.26□□□□□ -1.89
MSH2YOL090W RIM20Q12033 661 aa3.26□□□□□ -1.89
MSH2YOL090W HMG2P12684 1045 aa3.25□□□□□ -1.89
MSH2YOL090W RPS7AP26786 190 aaKnown RBP3.25□□□□□ -1.89
MSH2YOL090W SSE1P32589 693 aaKnown RBP3.25□□□□□ -1.89
MSH2YOL090W STB5P38699 743 aa3.25□□□□□ -1.89
MSH2YOL090W CEM1P39525 442 aa3.25□□□□□ -1.89
MSH2YOL090W YIL108WP40483 696 aaKnown RBP3.25□□□□□ -1.89
MSH2YOL090W TAH11P47112 604 aa3.25□□□□□ -1.89
MSH2YOL090W LSB1P53281 241 aa3.25□□□□□ -1.89
MSH2YOL090W THI22Q06490 572 aa3.25□□□□□ -1.89
MSH2YOL090W LUC7Q07508 261 aaPredicted RBP3.25□□□□□ -1.89
MSH2YOL090W YPT6Q99260 215 aa3.25□□□□□ -1.89
MSH2YOL090W SAM35P14693 329 aa3.25□□□□□ -1.89
MSH2YOL090W MRPL25P23369 157 aa3.25□□□□□ -1.89
MSH2YOL090W PHO84P25297 587 aaKnown RBP3.25□□□□□ -1.89
MSH2YOL090W RRP43P25359 394 aaPredicted RBP3.25□□□□□ -1.89
MSH2YOL090W CRM1P30822 1084 aaKnown RBP3.25□□□□□ -1.89
MSH2YOL090W SPC110P32380 944 aa3.25□□□□□ -1.89
MSH2YOL090W PET127P32606 800 aa3.25□□□□□ -1.89
MSH2YOL090W COY1P34237 679 aa3.25□□□□□ -1.89
MSH2YOL090W WHI3P34761 661 aaKnown RBP3.25□□□□□ -1.89
MSH2YOL090W NNK1P36003 928 aa3.25□□□□□ -1.89
MSH2YOL090W UBP11P36026 717 aa3.25□□□□□ -1.89
MSH2YOL090W APN2P38207 520 aa3.25□□□□□ -1.89
MSH2YOL090W YHR054CP38780 354 aa3.25□□□□□ -1.89
MSH2YOL090W MET12P46151 657 aa3.25□□□□□ -1.89
MSH2YOL090W SSY5P47002 699 aa3.25□□□□□ -1.89
MSH2YOL090W DAK1P54838 584 aaKnown RBP3.25□□□□□ -1.89
MSH2YOL090W DOT1Q04089 582 aaKnown RBP3.25□□□□□ -1.89
MSH2YOL090W MGR3Q04472 501 aa3.25□□□□□ -1.89
MSH2YOL090W KAP95Q06142 861 aaKnown RBP3.25□□□□□ -1.89
MSH2YOL090W YEH1Q07804 573 aa3.25□□□□□ -1.89
MSH2YOL090W BUD7Q08754 746 aa3.25□□□□□ -1.89
MSH2YOL090W LEU9Q12166 604 aaKnown RBP3.25□□□□□ -1.89
MSH2YOL090W RIB2Q12362 591 aaKnown RBP3.25□□□□□ -1.89
MSH2YOL090W GCN2P15442 1659 aa3.24□□□□□ -1.89
MSH2YOL090W ATP2P00830 511 aaKnown RBP3.24□□□□□ -1.89
MSH2YOL090W YML002WP0CF17 737 aa3.24□□□□□ -1.89
MSH2YOL090W PHO91P27514 894 aa3.24□□□□□ -1.89
MSH2YOL090W PRP45P28004 379 aaPredicted RBP3.24□□□□□ -1.89
MSH2YOL090W CRG1P38892 291 aaRIP-Chip data3.24□□□□□ -1.89 RIP-Chip
MSH2YOL090W SLZ1P40167 298 aa3.24□□□□□ -1.89
MSH2YOL090W PKP1P40530 394 aa3.24□□□□□ -1.89
MSH2YOL090W SQS1P53866 767 aaKnown RBP3.24□□□□□ -1.89
MSH2YOL090W RRP5Q05022 1729 aaKnown RBP3.24□□□□□ -1.89
MSH2YOL090W YLR346CQ06139 101 aa3.24□□□□□ -1.89
MSH2YOL090W MCP2Q06567 569 aa3.24□□□□□ -1.89
MSH2YOL090W PUS7Q08647 676 aaKnown RBP3.24□□□□□ -1.89
MSH2YOL090W SLP1Q12232 587 aa3.24□□□□□ -1.89
MSH2YOL090W NUP192P47054 1683 aa3.24□□□□□ -1.89
MSH2YOL090W GEA1P47102 1408 aaPredicted RBP3.24□□□□□ -1.89
MSH2YOL090W PRE2P30656 287 aaKnown RBP3.24□□□□□ -1.89
MSH2YOL090W AUR1P36107 401 aaPredicted RBP3.24□□□□□ -1.89
MSH2YOL090W GPT2P36148 743 aa3.24□□□□□ -1.89
MSH2YOL090W MRPL40P36534 297 aa3.24□□□□□ -1.89
MSH2YOL090W VID24P38263 362 aa3.24□□□□□ -1.89
MSH2YOL090W EHT1P38295 451 aa3.24□□□□□ -1.89
MSH2YOL090W VPS45P38932 577 aa3.24□□□□□ -1.89
MSH2YOL090W ARB1P40024 610 aaKnown RBP3.24□□□□□ -1.89
MSH2YOL090W ATG21Q02887 496 aa3.24□□□□□ -1.89
MSH2YOL090W ECM18Q04623 453 aa3.24□□□□□ -1.89
MSH2YOL090W RBS1Q05672 457 aaKnown RBP3.24□□□□□ -1.89
MSH2YOL090W SMD2Q06217 110 aaKnown RBP3.24□□□□□ -1.89
MSH2YOL090W UAF30Q08747 228 aa3.24□□□□□ -1.89
MSH2YOL090W YOR223WQ12015 292 aa3.24□□□□□ -1.89
MSH2YOL090W OSW2Q12202 724 aa3.24□□□□□ -1.89
MSH2YOL090W HER1Q12276 1246 aa3.24□□□□□ -1.89
MSH2YOL090W CTF3Q12748 733 aa3.24□□□□□ -1.89
MSH2YOL090W PET122P10355 254 aa3.23□□□□□ -1.89
MSH2YOL090W ALG14P38242 237 aa3.23□□□□□ -1.89
MSH2YOL090W VFA1P40080 203 aa3.23□□□□□ -1.89
MSH2YOL090W CAK1P43568 368 aaPredicted RBP3.23□□□□□ -1.89
MSH2YOL090W ZAP1P47043 880 aa3.23□□□□□ -1.89
MSH2YOL090W YGL036WP53185 909 aaPredicted RBP3.23□□□□□ -1.89
MSH2YOL090W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
MSH2YOL090W CWC21Q03375 135 aaKnown RBP3.23□□□□□ -1.89
MSH2YOL090W TPP1Q03796 238 aa3.23□□□□□ -1.89
MSH2YOL090W PEX19Q07418 342 aa3.23□□□□□ -1.89
MSH2YOL090W PYC1P11154 1178 aaKnown RBP3.23□□□□□ -1.89
MSH2YOL090W YME1P32795 747 aa3.23□□□□□ -1.89
MSH2YOL090W REG2P38232 338 aa3.23□□□□□ -1.89
MSH2YOL090W RRT2P38332 387 aa3.23□□□□□ -1.89
MSH2YOL090W OTU2P38747 307 aaKnown RBP3.23□□□□□ -1.89
MSH2YOL090W PUS2P53167 370 aa3.23□□□□□ -1.89
MSH2YOL090W BUD9P53226 547 aa3.23□□□□□ -1.89
MSH2YOL090W HMO1Q03973 246 aaKnown RBP3.23□□□□□ -1.89
MSH2YOL090W SWT1Q12104 458 aa3.23□□□□□ -1.89
MSH2YOL090W TY3A-GQ12173 290 aa3.23□□□□□ -1.89
MSH2YOL090W TY3A-IQ99219 290 aa3.23□□□□□ -1.89
MSH2YOL090W LPD1P09624 499 aaKnown RBP3.22□□□□□ -1.89
MSH2YOL090W SEF1P34228 1148 aa3.22□□□□□ -1.89
MSH2YOL090W YUH1P35127 236 aa3.22□□□□□ -1.89
MSH2YOL090W MAL33P38157 468 aa3.22□□□□□ -1.89
MSH2YOL090W TDP1P38319 544 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms