RNA–Protein interactions for RNA: YMR288W

HSH155, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH155, Length 2,916 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH155YMR288W HOS1Q12214 470 aa2.04□□□□□ -2.08
HSH155YMR288W CEX1Q12453 761 aa2.04□□□□□ -2.08
HSH155YMR288W NOP58Q12499 511 aaKnown RBP2.04□□□□□ -2.08
HSH155YMR288W PDR18P53756 1333 aa2.03□□□□□ -2.08
HSH155YMR288W GAL1P04385 528 aa2.03□□□□□ -2.08
HSH155YMR288W NAT1P12945 854 aaKnown RBP2.03□□□□□ -2.08
HSH155YMR288W RED1P14291 827 aa2.03□□□□□ -2.08
HSH155YMR288W APA1P16550 321 aaKnown RBP2.03□□□□□ -2.08
HSH155YMR288W ADK2P26364 225 aa2.03□□□□□ -2.08
HSH155YMR288W MCM4P30665 933 aaKnown RBP2.03□□□□□ -2.08
HSH155YMR288W TFC4P33339 1025 aa2.03□□□□□ -2.08
HSH155YMR288W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
HSH155YMR288W DBP7P36120 742 aaKnown RBP2.03□□□□□ -2.08
HSH155YMR288W RXT2P38255 430 aa2.03□□□□□ -2.08
HSH155YMR288W TDP1P38319 544 aa2.03□□□□□ -2.08
HSH155YMR288W SRP68P38687 599 aaKnown RBP2.03□□□□□ -2.08
HSH155YMR288W OSH3P38713 996 aaKnown RBP2.03□□□□□ -2.08
HSH155YMR288W HRB1P38922 454 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
HSH155YMR288W YEL025CP39991 1188 aa2.03□□□□□ -2.08
HSH155YMR288W BUD8P41698 603 aa2.03□□□□□ -2.08
HSH155YMR288W OCA1P50946 238 aaPredicted RBP2.03□□□□□ -2.08
HSH155YMR288W FHN1P53279 174 aa2.03□□□□□ -2.08
HSH155YMR288W UFO1Q04511 668 aa2.03□□□□□ -2.08
HSH155YMR288W HEL2Q05580 639 aaKnown RBP2.03□□□□□ -2.08
HSH155YMR288W SLK19Q08581 821 aaKnown RBP2.03□□□□□ -2.08
HSH155YMR288W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
HSH155YMR288W POL2P21951 2222 aaKnown RBP2.03□□□□□ -2.08
HSH155YMR288W THR1P17423 357 aaKnown RBP2.03□□□□□ -2.08
HSH155YMR288W SAM2P19358 384 aaKnown RBP2.03□□□□□ -2.08
HSH155YMR288W RAD51P25454 400 aa2.03□□□□□ -2.08
HSH155YMR288W PLC1P32383 869 aa2.03□□□□□ -2.08
HSH155YMR288W DAL3P32459 195 aa2.03□□□□□ -2.08
HSH155YMR288W PPZ2P33329 710 aa2.03□□□□□ -2.08
HSH155YMR288W SAS3P34218 831 aa2.03□□□□□ -2.08
HSH155YMR288W NUP120P35729 1037 aa2.03□□□□□ -2.08
HSH155YMR288W DRE2P36152 348 aa2.03□□□□□ -2.08
HSH155YMR288W FAT1P38225 669 aa2.03□□□□□ -2.08
HSH155YMR288W REG2P38232 338 aa2.03□□□□□ -2.08
HSH155YMR288W RFS1P38234 210 aaKnown RBP2.03□□□□□ -2.08
HSH155YMR288W CAJ1P39101 391 aa2.03□□□□□ -2.08
HSH155YMR288W GPP2P40106 250 aaKnown RBP2.03□□□□□ -2.08
HSH155YMR288W NIT2P47016 307 aa2.03□□□□□ -2.08
HSH155YMR288W NMA2P53204 395 aa2.03□□□□□ -2.08
HSH155YMR288W MET14Q02196 202 aa2.03□□□□□ -2.08
HSH155YMR288W FDC1Q03034 503 aa2.03□□□□□ -2.08
HSH155YMR288W YDR286CQ05530 114 aa2.03□□□□□ -2.08
HSH155YMR288W PGC1Q08959 321 aa2.03□□□□□ -2.08
HSH155YMR288W KEL3Q08979 651 aaPredicted RBP2.03□□□□□ -2.08
HSH155YMR288W RRP6Q12149 733 aaKnown RBP2.03□□□□□ -2.08
HSH155YMR288W MED1Q12321 566 aa2.03□□□□□ -2.08
HSH155YMR288W MPD2Q99316 277 aa2.03□□□□□ -2.08
HSH155YMR288W PCK1P10963 549 aa2.02□□□□□ -2.09
HSH155YMR288W ACO1P19414 778 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
HSH155YMR288W HXT4P32467 576 aa2.02□□□□□ -2.09
HSH155YMR288W VPH1P32563 840 aaKnown RBP2.02□□□□□ -2.09
HSH155YMR288W LNP1P38878 278 aa2.02□□□□□ -2.09
HSH155YMR288W ALD5P40047 520 aaKnown RBP2.02□□□□□ -2.09
HSH155YMR288W RRP46P53256 223 aaPredicted RBP2.02□□□□□ -2.09
HSH155YMR288W DIP5P53388 608 aa2.02□□□□□ -2.09
HSH155YMR288W YNR061CP53747 219 aa2.02□□□□□ -2.09
HSH155YMR288W GYL1Q04322 720 aa2.02□□□□□ -2.09
HSH155YMR288W HLR1Q04429 423 aa2.02□□□□□ -2.09
HSH155YMR288W SPH1Q06160 661 aa2.02□□□□□ -2.09
HSH155YMR288W YLR352WQ06479 807 aa2.02□□□□□ -2.09
HSH155YMR288W YDR056CQ12025 205 aa2.02□□□□□ -2.09
HSH155YMR288W CWC2Q12046 339 aaPredicted RBP2.02□□□□□ -2.09
HSH155YMR288W TGS1Q12052 315 aa2.02□□□□□ -2.09
HSH155YMR288W INH1P01097 85 aa2.02□□□□□ -2.09
HSH155YMR288W YEL076C-AP0CX16 216 aa2.02□□□□□ -2.09
HSH155YMR288W YLR464WP0CX17 216 aa2.02□□□□□ -2.09
HSH155YMR288W SWC3P31376 625 aa2.02□□□□□ -2.09
HSH155YMR288W MCM10P32354 571 aa2.02□□□□□ -2.09
HSH155YMR288W TGL1P34163 548 aa2.02□□□□□ -2.09
HSH155YMR288W YKL050CP35736 922 aa2.02□□□□□ -2.09
HSH155YMR288W ELF1P36053 145 aa2.02□□□□□ -2.09
HSH155YMR288W MED6P38782 295 aa2.02□□□□□ -2.09
HSH155YMR288W YEL076CP39971 216 aa2.02□□□□□ -2.09
HSH155YMR288W PRM2P40534 656 aa2.02□□□□□ -2.09
HSH155YMR288W MNT3P40549 630 aa2.02□□□□□ -2.09
HSH155YMR288W PMT6P42934 759 aa2.02□□□□□ -2.09
HSH155YMR288W GFD1Q04839 188 aaKnown RBP2.02□□□□□ -2.09
HSH155YMR288W YCG1Q06680 1035 aa2.02□□□□□ -2.09
HSH155YMR288W PSR2Q07949 397 aa2.02□□□□□ -2.09
HSH155YMR288W RKI1Q12189 258 aa2.02□□□□□ -2.09
HSH155YMR288W RPS19AP07280 144 aaKnown RBP2.01□□□□□ -2.09
HSH155YMR288W RPS19BP07281 144 aaPredicted RBP2.01□□□□□ -2.09
HSH155YMR288W HMG2P12684 1045 aa2.01□□□□□ -2.09
HSH155YMR288W HOM2P13663 365 aaKnown RBP2.01□□□□□ -2.09
HSH155YMR288W PRE8P23639 250 aa2.01□□□□□ -2.09
HSH155YMR288W GCD7P32502 381 aaPredicted RBP2.01□□□□□ -2.09
HSH155YMR288W PEX5P35056 612 aa2.01□□□□□ -2.09
HSH155YMR288W JNM1P36224 373 aa2.01□□□□□ -2.09
HSH155YMR288W MRPL7P36519 292 aa2.01□□□□□ -2.09
HSH155YMR288W PHO88P38264 188 aaPredicted RBP2.01□□□□□ -2.09
HSH155YMR288W YHL041WP38730 149 aa2.01□□□□□ -2.09
HSH155YMR288W YHR097CP38809 366 aaKnown RBP2.01□□□□□ -2.09
HSH155YMR288W VPS41P38959 992 aa2.01□□□□□ -2.09
HSH155YMR288W GCD10P41814 478 aa2.01□□□□□ -2.09
HSH155YMR288W VTC2P43585 828 aa2.01□□□□□ -2.09
HSH155YMR288W VPS73P53142 486 aaKnown RBP2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 37.2 ms