RNA–Protein interactions for RNA: YLR430W

SEN1, Transcript of Presumed helicase and subunit of the Nrd1 complex (Nrd1p-Nab3p-Sen1p), yeast

Gene SEN1, Length 6,696 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEN1	YLR430W	YBR259W	P38338	688 aa		4.21	□□□□□ -1.73
SEN1	YLR430W	GPB2	P39717	880 aa		4.21	□□□□□ -1.73
SEN1	YLR430W	MXR1	P40029	184 aa		4.21	□□□□□ -1.73
SEN1	YLR430W	CCT7	P42943	550 aa	Known RBP	4.21	□□□□□ -1.73
SEN1	YLR430W	PBP1	P53297	722 aa	Known RBP	4.21	□□□□□ -1.73
SEN1	YLR430W	SET6	Q12529	373 aa		4.21	□□□□□ -1.73
SEN1	YLR430W	MSS1	P32559	526 aa	Predicted RBP	4.21	□□□□□ -1.74
SEN1	YLR430W	POP4	P38336	279 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	YHR219W	P38900	624 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	BIM1	P40013	344 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	DSE1	P40077	573 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	HXT8	P40886	569 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	QRI1	P43123	477 aa	Known RBP	4.21	□□□□□ -1.74
SEN1	YLR430W	AGP3	P43548	558 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	UPF3	P48412	387 aa	Known RBP	4.21	□□□□□ -1.74
SEN1	YLR430W	CUL3	P53202	744 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	DLT1	Q04216	342 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	FAR10	Q06001	478 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	ATP2	P00830	511 aa	Known RBP	4.21	□□□□□ -1.74
SEN1	YLR430W	NFT1	P0CE68	1218 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	GUK1	P15454	187 aa	Known RBP	4.21	□□□□□ -1.74
SEN1	YLR430W	SNT1	P25357	1226 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	CHA1	P25379	360 aa	Known RBP	4.21	□□□□□ -1.74
SEN1	YLR430W	CBT1	P36038	271 aa	Predicted RBP	4.21	□□□□□ -1.74
SEN1	YLR430W	PHM8	P40025	321 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	NOP19	P53317	196 aa	Predicted RBP	4.21	□□□□□ -1.74
SEN1	YLR430W	RSN1	Q03516	953 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	RAD33	Q04231	177 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	RSC58	Q07979	502 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	TRE2	Q08693	809 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	THI21	Q08975	551 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	HAT1	Q12341	374 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	TSC13	Q99190	310 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	HRR25	P29295	494 aa	Known RBP	4.21	□□□□□ -1.74
SEN1	YLR430W	HYM1	P32464	399 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	KAP122	P32767	1081 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	SOH1	P38633	127 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	LNP1	P38878	278 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	END3	P39013	349 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	ALA1	P40825	983 aa	Known RBP	4.21	□□□□□ -1.74
SEN1	YLR430W	SCS7	Q03529	384 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	MLH3	Q12083	715 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	RPN6	Q12377	434 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	DFG16	Q99234	619 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	HEM15	P16622	393 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	ABZ1	P37254	787 aa	Predicted RBP	4.21	□□□□□ -1.74
SEN1	YLR430W	APM3	P38153	483 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	YMR134W	P40207	237 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	RCF2	P53721	224 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	YDR541C	Q03049	344 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	TRM82	Q03774	444 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	OSW2	Q12202	724 aa		4.21	□□□□□ -1.74
SEN1	YLR430W	NTE1	Q04958	1679 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	MET17	P06106	444 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	RTG2	P32608	588 aa	Known RBP	4.2	□□□□□ -1.74
SEN1	YLR430W	PRP40	P33203	583 aa	Known RBP	4.2	□□□□□ -1.74
SEN1	YLR430W	EDS1	P38073	919 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	HIS2	P38635	335 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	UFE1	P41834	346 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	YJL016W	P47072	561 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	CWC23	P52868	283 aa	Predicted RBP	4.2	□□□□□ -1.74
SEN1	YLR430W	GIM3	P53900	129 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	DIG1	Q03063	452 aa	Known RBP	4.2	□□□□□ -1.74
SEN1	YLR430W	SIZ1	Q04195	904 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	YPR022C	Q12139	1133 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	NUC1	P08466	329 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	ATP7	P30902	174 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	PRS2	P38620	318 aa	Known RBP	4.2	□□□□□ -1.74
SEN1	YLR430W	SLM1	P40485	686 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	VMA13	P41807	478 aa	Known RBP	4.2	□□□□□ -1.74
SEN1	YLR430W	MNN5	P46982	586 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	IRC18	P47056	224 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	YPL068C	Q02749	293 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	NSP1	P14907	823 aa	Known RBP	4.2	□□□□□ -1.74
SEN1	YLR430W	SFL1	P20134	766 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	AEP2	P22136	580 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	CNB1	P25296	175 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
SEN1	YLR430W	RXT2	P38255	430 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	YHR045W	P38775	560 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	THO1	P40040	218 aa	Known RBP	4.2	□□□□□ -1.74
SEN1	YLR430W	BNA6	P43619	295 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	RPS7B	P48164	190 aa	Known RBP	4.2	□□□□□ -1.74
SEN1	YLR430W	ROM1	P53046	1155 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	TEP1	P53916	434 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	RSB1	Q08417	382 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	RAD18	P10862	487 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	CAP2	P13517	287 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	YMR262W	P38430	313 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	IPL1	P38991	367 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	ARC1	P46672	376 aa	Known RBP	4.2	□□□□□ -1.74
SEN1	YLR430W	SWF1	Q04629	336 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	ASA1	Q06822	443 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	THI20	Q08224	551 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	PSY3	Q12318	242 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	DPH6	Q12429	685 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	PTC5	Q12511	572 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	GCD1	P09032	578 aa	Predicted RBP	4.2	□□□□□ -1.74
SEN1	YLR430W	IMA3	P0CW40	589 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	IMA4	P0CW41	589 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms