RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W MTG2P38860 518 aa3.7□□□□□ -1.82
LCB5YLR260W UTP9P38882 575 aaKnown RBP3.7□□□□□ -1.82
LCB5YLR260W SMC2P38989 1170 aaKnown RBP3.7□□□□□ -1.82
LCB5YLR260W UME6P39001 836 aa3.7□□□□□ -1.82
LCB5YLR260W SWD1P39706 426 aa3.7□□□□□ -1.82
LCB5YLR260W YEL076CP39971 216 aa3.7□□□□□ -1.82
LCB5YLR260W SCS2P40075 244 aaKnown RBP3.7□□□□□ -1.82
LCB5YLR260W THI6P41835 540 aa3.7□□□□□ -1.82
LCB5YLR260W SNF12P53628 566 aa3.7□□□□□ -1.82
LCB5YLR260W VPS75P53853 264 aa3.7□□□□□ -1.82
LCB5YLR260W PGA2P53903 129 aa3.7□□□□□ -1.82
LCB5YLR260W GTB1Q04924 702 aa3.7□□□□□ -1.82
LCB5YLR260W TGL5Q12043 749 aa3.7□□□□□ -1.82
LCB5YLR260W YOL159C-AQ3E769 90 aa3.7□□□□□ -1.82
LCB5YLR260W YLR358CO13565 187 aa3.69□□□□□ -1.82
LCB5YLR260W COX4P04037 155 aa3.69□□□□□ -1.82
LCB5YLR260W ADE4P04046 510 aaKnown RBP3.69□□□□□ -1.82
LCB5YLR260W RNR2P09938 399 aaKnown RBP3.69□□□□□ -1.82
LCB5YLR260W GRR1P24814 1151 aa3.69□□□□□ -1.82
LCB5YLR260W NPP1P25353 742 aa3.69□□□□□ -1.82
LCB5YLR260W KIP1P28742 1111 aa3.69□□□□□ -1.82
LCB5YLR260W SAC6P32599 642 aaKnown RBP3.69□□□□□ -1.82
LCB5YLR260W SUR1P33300 382 aa3.69□□□□□ -1.82
LCB5YLR260W TEF4P36008 412 aaKnown RBP3.69□□□□□ -1.82
LCB5YLR260W EMC3P36039 253 aa3.69□□□□□ -1.82
LCB5YLR260W YKL077WP36081 392 aa3.69□□□□□ -1.82
LCB5YLR260W STB6P36085 766 aa3.69□□□□□ -1.82
LCB5YLR260W RPC37P36121 282 aa3.69□□□□□ -1.82
LCB5YLR260W POL12P38121 705 aaPredicted RBP3.69□□□□□ -1.82
LCB5YLR260W YHL017WP38745 532 aa3.69□□□□□ -1.82
LCB5YLR260W NEM1P38757 446 aa3.69□□□□□ -1.82
LCB5YLR260W PEX18P38855 283 aa3.69□□□□□ -1.82
LCB5YLR260W FET5P43561 622 aa3.69□□□□□ -1.82
LCB5YLR260W NPA3P47122 385 aa3.69□□□□□ -1.82
LCB5YLR260W GCV1P48015 400 aa3.69□□□□□ -1.82
LCB5YLR260W HNT2P49775 206 aa3.69□□□□□ -1.82
LCB5YLR260W VID30P53076 958 aa3.69□□□□□ -1.82
LCB5YLR260W DUO1P53168 247 aaKnown RBP3.69□□□□□ -1.82
LCB5YLR260W OGG1P53397 376 aaPredicted RBP3.69□□□□□ -1.82
LCB5YLR260W BSC5P53755 489 aa3.69□□□□□ -1.82
LCB5YLR260W TOF2Q02208 771 aa3.69□□□□□ -1.82
LCB5YLR260W GGA1Q06336 557 aa3.69□□□□□ -1.82
LCB5YLR260W CIR2Q08822 631 aa3.69□□□□□ -1.82
LCB5YLR260W ENV7Q12003 364 aa3.69□□□□□ -1.82
LCB5YLR260W PHO5P00635 467 aa3.69□□□□□ -1.82
LCB5YLR260W PRC1P00729 532 aa3.69□□□□□ -1.82
LCB5YLR260W POL3P15436 1097 aa3.69□□□□□ -1.82
LCB5YLR260W SAC7P17121 654 aa3.69□□□□□ -1.82
LCB5YLR260W BET2P20133 325 aa3.69□□□□□ -1.82
LCB5YLR260W ADE2P21264 571 aaKnown RBP3.69□□□□□ -1.82
LCB5YLR260W MBR1P23493 339 aa3.69□□□□□ -1.82
LCB5YLR260W DEP1P31385 405 aa3.69□□□□□ -1.82
LCB5YLR260W SDS22P36047 338 aa3.69□□□□□ -1.82
LCB5YLR260W YBR138CP38277 524 aa3.69□□□□□ -1.82
LCB5YLR260W PSD1P39006 500 aa3.69□□□□□ -1.82
LCB5YLR260W ATF1P40353 525 aa3.69□□□□□ -1.82
LCB5YLR260W EFM4P40516 257 aa3.69□□□□□ -1.82
LCB5YLR260W SLS1P42900 643 aa3.69□□□□□ -1.82
LCB5YLR260W YFL052WP43551 465 aa3.69□□□□□ -1.82
LCB5YLR260W MRX6P48564 524 aa3.69□□□□□ -1.82
LCB5YLR260W GCV2P49095 1034 aa3.69□□□□□ -1.82
LCB5YLR260W HFM1P51979 1187 aa3.69□□□□□ -1.82
LCB5YLR260W ALT1P52893 592 aa3.69□□□□□ -1.82
LCB5YLR260W MCM6P53091 1017 aaKnown RBP3.69□□□□□ -1.82
LCB5YLR260W JJJ1P53863 590 aa3.69□□□□□ -1.82
LCB5YLR260W VPS20Q04272 221 aa3.69□□□□□ -1.82
LCB5YLR260W YDR514CQ04408 483 aa3.69□□□□□ -1.82
LCB5YLR260W CSM3Q04659 317 aa3.69□□□□□ -1.82
LCB5YLR260W NOP6Q07623 225 aaKnown RBP3.69□□□□□ -1.82
LCB5YLR260W PML1Q07930 204 aaPredicted RBP3.69□□□□□ -1.82
LCB5YLR260W RTC5Q12108 567 aaKnown RBP3.69□□□□□ -1.82
LCB5YLR260W YPL150WQ12152 901 aa3.69□□□□□ -1.82
LCB5YLR260W NSI1Q12457 570 aa3.69□□□□□ -1.82
LCB5YLR260W AI1P03875 834 aa3.68□□□□□ -1.82
LCB5YLR260W RPB2P08518 1224 aaKnown RBP3.68□□□□□ -1.82
LCB5YLR260W SUI3P09064 285 aaKnown RBP3.68□□□□□ -1.82
LCB5YLR260W RPL19AP0CX82 189 aaKnown RBP3.68□□□□□ -1.82
LCB5YLR260W RPL19BP0CX83 189 aaPredicted RBP3.68□□□□□ -1.82
LCB5YLR260W ERS1P17261 260 aa3.68□□□□□ -1.82
LCB5YLR260W CLB1P24868 471 aa3.68□□□□□ -1.82
LCB5YLR260W TRK2P28584 889 aa3.68□□□□□ -1.82
LCB5YLR260W TMT1P32643 299 aa3.68□□□□□ -1.82
LCB5YLR260W SFA1P32771 386 aa3.68□□□□□ -1.82
LCB5YLR260W MRE11P32829 692 aa3.68□□□□□ -1.82
LCB5YLR260W SWH1P35845 1188 aa3.68□□□□□ -1.82
LCB5YLR260W ADD66P36040 267 aa3.68□□□□□ -1.82
LCB5YLR260W RFS1P38234 210 aaKnown RBP3.68□□□□□ -1.82
LCB5YLR260W RFC5P38251 354 aa3.68□□□□□ -1.82
LCB5YLR260W STB5P38699 743 aa3.68□□□□□ -1.82
LCB5YLR260W DED81P38707 554 aaKnown RBP3.68□□□□□ -1.82
LCB5YLR260W RIX1P38883 763 aaPredicted RBP3.68□□□□□ -1.82
LCB5YLR260W PIK1P39104 1066 aa3.68□□□□□ -1.82
LCB5YLR260W SIP4P46954 829 aa3.68□□□□□ -1.82
LCB5YLR260W MDR1P53258 950 aa3.68□□□□□ -1.82
LCB5YLR260W UTP5Q04177 643 aaKnown RBP3.68□□□□□ -1.82
LCB5YLR260W VBA4Q04602 768 aaKnown RBP3.68□□□□□ -1.82
LCB5YLR260W FUS2Q05670 677 aa3.68□□□□□ -1.82
LCB5YLR260W ECM22Q05958 814 aaPredicted RBP3.68□□□□□ -1.82
LCB5YLR260W YLR456WQ06199 204 aa3.68□□□□□ -1.82
LCB5YLR260W MDM36Q06820 579 aa3.68□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms