RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeastyeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC4YLR086W YSA1Q01976 231 aa1.56□□□□□ -2.16
SMC4YLR086W GRX6Q12438 231 aa1.56□□□□□ -2.16
SMC4YLR086W EDE1P34216 1381 aa1.56□□□□□ -2.16
SMC4YLR086W MLP2P40457 1679 aa1.56□□□□□ -2.16
SMC4YLR086W GEA1P47102 1408 aaPredicted RBP1.56□□□□□ -2.16
SMC4YLR086W ESC1Q03661 1658 aaKnown RBP1.56□□□□□ -2.16
SMC4YLR086W DNF1P32660 1571 aa1.56□□□□□ -2.16
SMC4YLR086W RKR1Q04781 1562 aa1.56□□□□□ -2.16
SMC4YLR086W KAR3P17119 729 aa1.56□□□□□ -2.16
SMC4YLR086W PWP1P21304 576 aaKnown RBP1.56□□□□□ -2.16
SMC4YLR086W CLB2P24869 491 aa1.56□□□□□ -2.16
SMC4YLR086W LCB1P25045 558 aaKnown RBP1.56□□□□□ -2.16
SMC4YLR086W PIM1P36775 1133 aa1.56□□□□□ -2.16
SMC4YLR086W NPA3P47122 385 aa1.56□□□□□ -2.16
SMC4YLR086W STB4P50104 949 aa1.56□□□□□ -2.16
SMC4YLR086W VPS73P53142 486 aaKnown RBP1.56□□□□□ -2.16
SMC4YLR086W TAM41P53230 385 aa1.56□□□□□ -2.16
SMC4YLR086W COG2P53271 262 aa1.56□□□□□ -2.16
SMC4YLR086W MFM1Q02783 413 aa1.56□□□□□ -2.16
SMC4YLR086W CRF1Q04930 467 aa1.56□□□□□ -2.16
SMC4YLR086W HOF1Q05080 669 aa1.56□□□□□ -2.16
SMC4YLR086W YEH1Q07804 573 aa1.56□□□□□ -2.16
SMC4YLR086W GPN2Q08726 347 aaPredicted RBP1.56□□□□□ -2.16
SMC4YLR086W RDL1Q12305 139 aaKnown RBP1.56□□□□□ -2.16
SMC4YLR086W PNS1Q12412 539 aa1.56□□□□□ -2.16
SMC4YLR086W SKM1Q12469 655 aa1.56□□□□□ -2.16
SMC4YLR086W YJR112W-AQ3E743 109 aa1.56□□□□□ -2.16
SMC4YLR086W HAP1P0CE41 1502 aa1.56□□□□□ -2.16
SMC4YLR086W MET5P47169 1442 aa1.56□□□□□ -2.16
SMC4YLR086W ECM5Q03214 1411 aa1.56□□□□□ -2.16
SMC4YLR086W BPT1P14772 1559 aa1.55□□□□□ -2.16
SMC4YLR086W CKA1P15790 372 aa1.55□□□□□ -2.16
SMC4YLR086W RNR3P21672 869 aaKnown RBP1.55□□□□□ -2.16
SMC4YLR086W STE50P25344 346 aa1.55□□□□□ -2.16
SMC4YLR086W LAC1P28496 418 aa1.55□□□□□ -2.16
SMC4YLR086W ERG3P32353 365 aa1.55□□□□□ -2.16
SMC4YLR086W RPC34P32910 317 aa1.55□□□□□ -2.16
SMC4YLR086W MUD2P36084 527 aaKnown RBP1.55□□□□□ -2.16
SMC4YLR086W PCL5P38794 229 aa1.55□□□□□ -2.16
SMC4YLR086W PSD1P39006 500 aa1.55□□□□□ -2.16
SMC4YLR086W ASG1P40467 964 aa1.55□□□□□ -2.16
SMC4YLR086W SWP82P43554 623 aa1.55□□□□□ -2.16
SMC4YLR086W FCP1Q03254 732 aa1.55□□□□□ -2.16
SMC4YLR086W RIX7Q07844 837 aaKnown RBP1.55□□□□□ -2.16
SMC4YLR086W CTI6Q08923 506 aa1.55□□□□□ -2.16
SMC4YLR086W LEA1Q08963 238 aaPredicted RBP1.55□□□□□ -2.16
SMC4YLR086W PCL8Q08966 492 aa1.55□□□□□ -2.16
SMC4YLR086W LTE1P07866 1435 aa1.55□□□□□ -2.16
SMC4YLR086W SEC3P33332 1336 aaKnown RBP1.55□□□□□ -2.16
SMC4YLR086W PEP1P32319 1579 aa1.55□□□□□ -2.16
SMC4YLR086W CDC43P18898 376 aa1.55□□□□□ -2.16
SMC4YLR086W SAN1P22470 610 aa1.55□□□□□ -2.16
SMC4YLR086W EMP70P32802 667 aa1.55□□□□□ -2.16
SMC4YLR086W MRE11P32829 692 aa1.55□□□□□ -2.16
SMC4YLR086W MTH1P35198 433 aa1.55□□□□□ -2.16
SMC4YLR086W MRX1P40050 688 aa1.55□□□□□ -2.16
SMC4YLR086W LSM5P40089 93 aaKnown RBP1.55□□□□□ -2.16
SMC4YLR086W IME4P41833 600 aa1.55□□□□□ -2.16
SMC4YLR086W PMT6P42934 759 aa1.55□□□□□ -2.16
SMC4YLR086W YFL015CP43578 164 aa1.55□□□□□ -2.16
SMC4YLR086W FAR3P46671 204 aa1.55□□□□□ -2.16
SMC4YLR086W SAE2P46946 345 aa1.55□□□□□ -2.16
SMC4YLR086W APM1Q00776 475 aaPredicted RBP1.55□□□□□ -2.16
SMC4YLR086W RQC1Q05468 723 aaKnown RBP1.55□□□□□ -2.16
SMC4YLR086W SKG3Q06315 1026 aa1.55□□□□□ -2.16
SMC4YLR086W TMA16Q08687 178 aa1.55□□□□□ -2.16
SMC4YLR086W RCN2Q12044 265 aa1.55□□□□□ -2.16
SMC4YLR086W COX17Q12287 69 aa1.55□□□□□ -2.16
SMC4YLR086W SCC2Q04002 1493 aa1.55□□□□□ -2.16
SMC4YLR086W SAT4P25333 603 aaKnown RBP1.55□□□□□ -2.16
SMC4YLR086W PRD1P25375 712 aa1.55□□□□□ -2.16
SMC4YLR086W YKL050CP35736 922 aa1.55□□□□□ -2.16
SMC4YLR086W TOM71P38825 639 aaKnown RBP1.55□□□□□ -2.16
SMC4YLR086W ARF3P40994 183 aaRIP-Chip data1.55□□□□□ -2.16not detected
SMC4YLR086W CTK2P46962 323 aa1.55□□□□□ -2.16
SMC4YLR086W NMA2P53204 395 aa1.55□□□□□ -2.16
SMC4YLR086W EFM6P53970 246 aa1.55□□□□□ -2.16
SMC4YLR086W TDA9Q04545 1251 aa1.55□□□□□ -2.16
SMC4YLR086W ATG9Q12142 997 aa1.55□□□□□ -2.16
SMC4YLR086W PCD1Q12524 340 aa1.55□□□□□ -2.16
SMC4YLR086W AAC3P18238 307 aa1.54□□□□□ -2.16
SMC4YLR086W BUD5P25300 642 aaPredicted RBP1.54□□□□□ -2.16
SMC4YLR086W RRP43P25359 394 aaPredicted RBP1.54□□□□□ -2.16
SMC4YLR086W PTC6P25646 442 aa1.54□□□□□ -2.16
SMC4YLR086W AGP2P38090 596 aa1.54□□□□□ -2.16
SMC4YLR086W STB5P38699 743 aa1.54□□□□□ -2.16
SMC4YLR086W ECM10P39987 644 aa1.54□□□□□ -2.16
SMC4YLR086W MET18P40469 1032 aa1.54□□□□□ -2.16
SMC4YLR086W DUO1P53168 247 aaKnown RBP1.54□□□□□ -2.16
SMC4YLR086W MUK1Q02866 612 aa1.54□□□□□ -2.16
SMC4YLR086W WAR1Q03631 944 aa1.54□□□□□ -2.16
SMC4YLR086W CAC2Q04199 468 aa1.54□□□□□ -2.16
SMC4YLR086W PLM2Q04383 521 aa1.54□□□□□ -2.16
SMC4YLR086W ECM22Q05958 814 aaPredicted RBP1.54□□□□□ -2.16
SMC4YLR086W PIG1Q06216 648 aa1.54□□□□□ -2.16
SMC4YLR086W BSP1Q06604 576 aa1.54□□□□□ -2.16
SMC4YLR086W SPE4Q12455 300 aa1.54□□□□□ -2.16
SMC4YLR086W SEC39Q12745 709 aa1.54□□□□□ -2.16
SMC4YLR086W YCF1P39109 1515 aaKnown RBP1.54□□□□□ -2.16
SMC4YLR086W YLR302CO13544 120 aa1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms