RNA–Protein interactions for RNA: YKR082W

NUP133, Transcript of Subunit of Nup84p subcomplex of nuclear pore complex (NPC), yeast

Gene NUP133, Length 3,474 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP133	YKR082W	SAM1	P10659	382 aa	Known RBP	4.13	□□□□□ -1.75
NUP133	YKR082W	CDC23	P16522	626 aa		4.13	□□□□□ -1.75
NUP133	YKR082W	GID7	P25569	745 aa		4.13	□□□□□ -1.75
NUP133	YKR082W	HXT4	P32467	576 aa		4.13	□□□□□ -1.75
NUP133	YKR082W	YKL063C	P35725	167 aa		4.13	□□□□□ -1.75
NUP133	YKR082W	GPT2	P36148	743 aa		4.13	□□□□□ -1.75
NUP133	YKR082W	HSL7	P38274	827 aa		4.13	□□□□□ -1.75
NUP133	YKR082W	VMA22	P38784	181 aa		4.13	□□□□□ -1.75
NUP133	YKR082W	MNN9	P39107	395 aa	Known RBP	4.13	□□□□□ -1.75
NUP133	YKR082W	FHL1	P39521	936 aa		4.13	□□□□□ -1.75
NUP133	YKR082W	EPS1	P40557	701 aa		4.13	□□□□□ -1.75
NUP133	YKR082W	CAF16	P43569	289 aa		4.13	□□□□□ -1.75
NUP133	YKR082W	MRK1	P50873	501 aa		4.13	□□□□□ -1.75
NUP133	YKR082W	KAP114	P53067	1004 aa		4.13	□□□□□ -1.75
NUP133	YKR082W	SLX9	P53251	210 aa	Predicted RBP	4.13	□□□□□ -1.75
NUP133	YKR082W	ABZ2	Q03266	374 aa		4.13	□□□□□ -1.75
NUP133	YKR082W	JIP4	Q03361	876 aa		4.13	□□□□□ -1.75
NUP133	YKR082W	USA1	Q03714	838 aa		4.13	□□□□□ -1.75
NUP133	YKR082W	YDL114W	Q07530	308 aa		4.13	□□□□□ -1.75
NUP133	YKR082W	BUD7	Q08754	746 aa		4.13	□□□□□ -1.75
NUP133	YKR082W	TCO89	Q08921	799 aa		4.13	□□□□□ -1.75
NUP133	YKR082W	HAA1	Q12753	694 aa	Known RBP	4.13	□□□□□ -1.75
NUP133	YKR082W	HIS3	P06633	220 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	WHI2	P12611	486 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	PRP4	P20053	465 aa	Known RBP	4.12	□□□□□ -1.75
NUP133	YKR082W	SIR1	P21691	654 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	BOS1	P25385	244 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	PDC6	P26263	563 aa	Known RBP	4.12	□□□□□ -1.75
NUP133	YKR082W	SIN4	P32259	974 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	ERT1	P38140	529 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	OSH7	P38755	437 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	EFM4	P40516	257 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	YFR006W	P43590	535 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	UBP6	P43593	499 aa	Known RBP	4.12	□□□□□ -1.75
NUP133	YKR082W	YKE2	P52553	114 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	YGR273C	P53329	174 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	CPR6	P53691	371 aa	Known RBP	4.12	□□□□□ -1.75
NUP133	YKR082W	WAR1	Q03631	944 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	ARO10	Q06408	635 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	AEP3	Q12089	606 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	GPM3	Q12326	303 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	NCB2	Q92317	146 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	BNI1	P41832	1953 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	CDC42	P19073	191 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
NUP133	YKR082W	RPB10	P22139	70 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	RVS161	P25343	265 aa	Known RBP	4.12	□□□□□ -1.75
NUP133	YKR082W	ATP7	P30902	174 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	MF(ALPHA)2	P32435	120 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	SPO23	P33757	523 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	PEX28	P38848	579 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	HXT6	P39003	570 aa	Known RBP	4.12	□□□□□ -1.75
NUP133	YKR082W	HXT7	P39004	570 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	CUL3	P53202	744 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	ATC1	Q04005	294 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	YMR114C	Q04471	368 aa	Known RBP	4.12	□□□□□ -1.75
NUP133	YKR082W	DAL4	Q04895	635 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	YLR456W	Q06199	204 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	VAM3	Q12241	283 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	CDC37	P06101	506 aa	Known RBP	4.12	□□□□□ -1.75
NUP133	YKR082W	RPL1A	P0CX43	217 aa	Known RBP	4.12	□□□□□ -1.75
NUP133	YKR082W	RPL1B	P0CX44	217 aa	Known RBP	4.12	□□□□□ -1.75
NUP133	YKR082W	HMT1	P38074	348 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	BMT2	P38278	337 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	PCL6	P40038	420 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	CDC40	P40968	455 aa	Predicted RBP	4.12	□□□□□ -1.75
NUP133	YKR082W	ART5	P53244	586 aa	Known RBP	4.12	□□□□□ -1.75
NUP133	YKR082W	MPP6	P53725	186 aa	Predicted RBP	4.12	□□□□□ -1.75
NUP133	YKR082W	DYN3	Q04949	312 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	YLR283W	Q05867	314 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	HBT1	Q07653	1046 aa	Known RBP	4.12	□□□□□ -1.75
NUP133	YKR082W	GUD1	Q07729	489 aa		4.12	□□□□□ -1.75
NUP133	YKR082W	HAP1	P0CE41	1502 aa		4.11	□□□□□ -1.75
NUP133	YKR082W	RPS24A	P0CX31	135 aa	Known RBP	4.11	□□□□□ -1.75
NUP133	YKR082W	RPS24B	P0CX32	135 aa	Known RBP	4.11	□□□□□ -1.75
NUP133	YKR082W	DBF2	P22204	572 aa		4.11	□□□□□ -1.75
NUP133	YKR082W	RBK1	P25332	333 aa		4.11	□□□□□ -1.75
NUP133	YKR082W	RHB1	P25378	209 aa		4.11	□□□□□ -1.75
NUP133	YKR082W	RPS7A	P26786	190 aa	Known RBP	4.11	□□□□□ -1.75
NUP133	YKR082W	ARO4	P32449	370 aa	Known RBP	4.11	□□□□□ -1.75
NUP133	YKR082W	YME1	P32795	747 aa		4.11	□□□□□ -1.75
NUP133	YKR082W	PUG1	P40100	303 aa		4.11	□□□□□ -1.75
NUP133	YKR082W	LRO1	P40345	661 aa		4.11	□□□□□ -1.75
NUP133	YKR082W	TFG2	P41896	400 aa	Predicted RBP	4.11	□□□□□ -1.75
NUP133	YKR082W	ECL1	P48235	211 aa		4.11	□□□□□ -1.75
NUP133	YKR082W	COG2	P53271	262 aa		4.11	□□□□□ -1.75
NUP133	YKR082W	RCF2	P53721	224 aa		4.11	□□□□□ -1.75
NUP133	YKR082W	YDC1	Q02896	317 aa		4.11	□□□□□ -1.75
NUP133	YKR082W	PLP1	Q04004	230 aa		4.11	□□□□□ -1.75
NUP133	YKR082W	THI3	Q07471	609 aa		4.11	□□□□□ -1.75
NUP133	YKR082W	BDS1	Q08347	646 aa		4.11	□□□□□ -1.75
NUP133	YKR082W	YPL225W	Q08971	146 aa	Known RBP	4.11	□□□□□ -1.75
NUP133	YKR082W	NOT3	P06102	836 aa	Known RBP	4.11	□□□□□ -1.75
NUP133	YKR082W	TAL1	P15019	335 aa	Known RBP	4.11	□□□□□ -1.75
NUP133	YKR082W	KGD2	P19262	463 aa	Predicted RBP	4.11	□□□□□ -1.75
NUP133	YKR082W	KGD1	P20967	1014 aa	Known RBP	4.11	□□□□□ -1.75
NUP133	YKR082W	AFG1	P32317	509 aa		4.11	□□□□□ -1.75
NUP133	YKR082W	RPT3	P33298	428 aa	Known RBP	4.11	□□□□□ -1.75
NUP133	YKR082W	STB6	P36085	766 aa		4.11	□□□□□ -1.75
NUP133	YKR082W	CIN5	P40917	295 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 86.1 ms