RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeastyeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSR3YKR053C RMP1Q12530 201 aa10.14□□□□□ -0.79
YSR3YKR053C PET111P08468 800 aa10.13□□□□□ -0.79
YSR3YKR053C PRP9P19736 530 aaKnown RBP10.13□□□□□ -0.79
YSR3YKR053C YCL068CP25593 260 aa10.13□□□□□ -0.79
YSR3YKR053C URA10P30402 227 aa10.13□□□□□ -0.79
YSR3YKR053C MRP21P38175 177 aa10.13□□□□□ -0.79
YSR3YKR053C DBP8P38719 431 aa10.13□□□□□ -0.79
YSR3YKR053C YIL108WP40483 696 aaKnown RBP10.13□□□□□ -0.79
YSR3YKR053C SUM1P46676 1062 aa10.13□□□□□ -0.79
YSR3YKR053C PET117Q02771 107 aa10.13□□□□□ -0.79
YSR3YKR053C YLL032CQ07834 825 aaKnown RBP RIP-Chip data10.13□□□□□ -0.79not detected
YSR3YKR053C CUE5Q08412 411 aaKnown RBP10.13□□□□□ -0.79
YSR3YKR053C SLD7Q08457 257 aa10.13□□□□□ -0.79
YSR3YKR053C BUD7Q08754 746 aa10.13□□□□□ -0.79
YSR3YKR053C VPS68Q12016 184 aa10.13□□□□□ -0.79
YSR3YKR053C TEL1P38110 2787 aa10.12□□□□□ -0.79
YSR3YKR053C PHO84P25297 587 aaKnown RBP10.12□□□□□ -0.79
YSR3YKR053C CDC20P26309 610 aa10.12□□□□□ -0.79
YSR3YKR053C RFA2P26754 273 aaKnown RBP10.12□□□□□ -0.79
YSR3YKR053C TPS2P31688 896 aaKnown RBP10.12□□□□□ -0.79
YSR3YKR053C TIM17P39515 158 aa10.12□□□□□ -0.79
YSR3YKR053C SEO1P39709 593 aa10.12□□□□□ -0.79
YSR3YKR053C ERV46P39727 415 aa10.12□□□□□ -0.79
YSR3YKR053C IME4P41833 600 aa10.12□□□□□ -0.79
YSR3YKR053C SAE2P46946 345 aa10.12□□□□□ -0.79
YSR3YKR053C SUN4P53616 420 aa10.12□□□□□ -0.79
YSR3YKR053C FRE4P53746 719 aa10.12□□□□□ -0.79
YSR3YKR053C NHX1Q04121 633 aa10.12□□□□□ -0.79
YSR3YKR053C NUT2Q06213 157 aa10.12□□□□□ -0.79
YSR3YKR053C BUD20Q08004 166 aaPredicted RBP10.12□□□□□ -0.79
YSR3YKR053C SMF3Q12078 473 aaPredicted RBP10.12□□□□□ -0.79
YSR3YKR053C CPA1P07258 411 aaKnown RBP10.11□□□□□ -0.79
YSR3YKR053C INO1P11986 533 aa10.11□□□□□ -0.79
YSR3YKR053C GLN4P13188 809 aaKnown RBP10.11□□□□□ -0.79
YSR3YKR053C URA7P28274 579 aaKnown RBP10.11□□□□□ -0.79
YSR3YKR053C CYC2P38909 366 aa10.11□□□□□ -0.79
YSR3YKR053C ALG8P40351 577 aa10.11□□□□□ -0.79
YSR3YKR053C GTS1P40956 396 aa10.11□□□□□ -0.79
YSR3YKR053C ARH1P48360 493 aa10.11□□□□□ -0.79
YSR3YKR053C PEX8P53248 589 aa10.11□□□□□ -0.79
YSR3YKR053C COG6P53959 839 aa10.11□□□□□ -0.79
YSR3YKR053C CCE1Q03702 353 aa10.11□□□□□ -0.79
YSR3YKR053C YDR109CQ04585 715 aa10.11□□□□□ -0.79
YSR3YKR053C THI73Q07904 523 aa10.11□□□□□ -0.79
YSR3YKR053C HRK1Q08732 759 aaKnown RBP10.11□□□□□ -0.79
YSR3YKR053C CBF1P17106 351 aa10.1□□□□□ -0.79
YSR3YKR053C RDS2P19541 446 aaKnown RBP10.1□□□□□ -0.79
YSR3YKR053C STB6P36085 766 aa10.1□□□□□ -0.79
YSR3YKR053C GMH1P36125 273 aa10.1□□□□□ -0.79
YSR3YKR053C OLA1P38219 394 aaKnown RBP10.1□□□□□ -0.79
YSR3YKR053C YSW1P38280 609 aa10.1□□□□□ -0.79
YSR3YKR053C PCL5P38794 229 aa10.1□□□□□ -0.79
YSR3YKR053C IRR1P40541 1150 aa10.1□□□□□ -0.79
YSR3YKR053C YNL320WP42840 284 aa10.1□□□□□ -0.79
YSR3YKR053C FET5P43561 622 aa10.1□□□□□ -0.79
YSR3YKR053C BIR1P47134 954 aa10.1□□□□□ -0.79
YSR3YKR053C RPN9Q04062 393 aaKnown RBP10.1□□□□□ -0.79
YSR3YKR053C BLS1Q06071 122 aa10.1□□□□□ -0.79
YSR3YKR053C TRM8Q12009 286 aa10.1□□□□□ -0.79
YSR3YKR053C NOP14Q99207 810 aaKnown RBP10.1□□□□□ -0.79
YSR3YKR053C YPR089WO13585 888 aa10.09□□□□□ -0.79
YSR3YKR053C SEM1O94742 89 aa10.09□□□□□ -0.79
YSR3YKR053C TUB1P09733 447 aaKnown RBP10.09□□□□□ -0.79
YSR3YKR053C VAN1P23642 535 aa10.09□□□□□ -0.79
YSR3YKR053C SPR1P32603 445 aa10.09□□□□□ -0.79
YSR3YKR053C ACO2P39533 789 aa10.09□□□□□ -0.79
YSR3YKR053C LTP1P40347 161 aa10.09□□□□□ -0.79
YSR3YKR053C INA22P40576 216 aa10.09□□□□□ -0.79
YSR3YKR053C YFL012WP43580 148 aa10.09□□□□□ -0.79
YSR3YKR053C NPL3Q01560 414 aaKnown RBP RIP-Chip data10.09□□□□□ -0.79not detected
YSR3YKR053C TFB2Q02939 513 aa10.09□□□□□ -0.79
YSR3YKR053C VPS60Q03390 229 aa10.09□□□□□ -0.79
YSR3YKR053C YML096WQ04489 525 aa10.09□□□□□ -0.79
YSR3YKR053C PLB3Q08108 686 aa10.09□□□□□ -0.79
YSR3YKR053C ALR1Q08269 859 aa10.09□□□□□ -0.79
YSR3YKR053C TFB4Q12004 338 aa10.09□□□□□ -0.79
YSR3YKR053C GTT2Q12390 233 aa10.09□□□□□ -0.79
YSR3YKR053C RMD5Q12508 421 aa10.09□□□□□ -0.79
YSR3YKR053C CMD1P06787 147 aaKnown RBP10.08□□□□□ -0.8
YSR3YKR053C ERG20P08524 352 aaKnown RBP10.08□□□□□ -0.8
YSR3YKR053C SNF5P18480 905 aa10.08□□□□□ -0.8
YSR3YKR053C ATP12P22135 325 aa10.08□□□□□ -0.8
YSR3YKR053C GUT2P32191 649 aa10.08□□□□□ -0.8
YSR3YKR053C PRP18P33411 251 aaPredicted RBP10.08□□□□□ -0.8
YSR3YKR053C ELO1P39540 310 aa10.08□□□□□ -0.8
YSR3YKR053C ATG36P46983 293 aa10.08□□□□□ -0.8
YSR3YKR053C YMR027WQ04371 470 aa10.08□□□□□ -0.8
YSR3YKR053C EMI1Q04406 187 aa10.08□□□□□ -0.8
YSR3YKR053C NHA1Q99271 985 aa10.08□□□□□ -0.8
YSR3YKR053C CDC8P00572 216 aa10.07□□□□□ -0.8
YSR3YKR053C AMD1P15274 810 aaKnown RBP10.07□□□□□ -0.8
YSR3YKR053C SCL1P21243 252 aaKnown RBP10.07□□□□□ -0.8
YSR3YKR053C MRPL9P31334 269 aa10.07□□□□□ -0.8
YSR3YKR053C TFC3P34111 1160 aa10.07□□□□□ -0.8
YSR3YKR053C TOM20P35180 183 aa10.07□□□□□ -0.8
YSR3YKR053C RPC37P36121 282 aa10.07□□□□□ -0.8
YSR3YKR053C MEF2P39677 819 aa10.07□□□□□ -0.8
YSR3YKR053C CTK3P46963 296 aaPredicted RBP10.07□□□□□ -0.8
YSR3YKR053C CIS3P47001 227 aa10.07□□□□□ -0.8
YSR3YKR053C ARX1Q03862 593 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 46.1 ms