RNA–Protein interactions for RNA: YKL036C

YKL036C, Transcript of Dubious open reading frame, yeast

Gene YKL036C, Length 393 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKL036C	YKL036C	VPS68	Q12016	184 aa		18.35	■□□□□ 0.53
YKL036C	YKL036C	RFA2	P26754	273 aa	Known RBP	18.34	■□□□□ 0.53
YKL036C	YKL036C	TIM17	P39515	158 aa		18.34	■□□□□ 0.53
YKL036C	YKL036C	FET5	P43561	622 aa		18.34	■□□□□ 0.53
YKL036C	YKL036C	DUG1	P43616	481 aa	Known RBP	18.34	■□□□□ 0.53
YKL036C	YKL036C	CIS3	P47001	227 aa		18.34	■□□□□ 0.53
YKL036C	YKL036C	TRM8	Q12009	286 aa		18.34	■□□□□ 0.53
YKL036C	YKL036C	YPR089W	O13585	888 aa		18.33	■□□□□ 0.52
YKL036C	YKL036C	TUB1	P09733	447 aa	Known RBP	18.33	■□□□□ 0.52
YKL036C	YKL036C	GLN4	P13188	809 aa	Known RBP	18.33	■□□□□ 0.52
YKL036C	YKL036C	YCL068C	P25593	260 aa		18.33	■□□□□ 0.52
YKL036C	YKL036C	GCG1	P32656	232 aa	Known RBP	18.33	■□□□□ 0.52
YKL036C	YKL036C	LDB7	P38210	180 aa		18.33	■□□□□ 0.52
YKL036C	YKL036C	DBP8	P38719	431 aa		18.33	■□□□□ 0.52
YKL036C	YKL036C	PCL5	P38794	229 aa		18.33	■□□□□ 0.52
YKL036C	YKL036C	CYC2	P38909	366 aa		18.33	■□□□□ 0.52
YKL036C	YKL036C	CCT4	P39078	528 aa	Known RBP	18.33	■□□□□ 0.52
YKL036C	YKL036C	ELO1	P39540	310 aa		18.33	■□□□□ 0.52
YKL036C	YKL036C	IRR1	P40541	1150 aa		18.33	■□□□□ 0.52
YKL036C	YKL036C	PXA1	P41909	870 aa		18.33	■□□□□ 0.52
YKL036C	YKL036C	CTK3	P46963	296 aa	Predicted RBP	18.33	■□□□□ 0.52
YKL036C	YKL036C	RPN9	Q04062	393 aa	Known RBP	18.33	■□□□□ 0.52
YKL036C	YKL036C	EMI1	Q04406	187 aa		18.33	■□□□□ 0.52
YKL036C	YKL036C	ALR1	Q08269	859 aa		18.33	■□□□□ 0.52
YKL036C	YKL036C	SMF3	Q12078	473 aa	Predicted RBP	18.33	■□□□□ 0.52
YKL036C	YKL036C	CPA1	P07258	411 aa	Known RBP	18.32	■□□□□ 0.52
YKL036C	YKL036C	RPL1A	P0CX43	217 aa	Known RBP	18.32	■□□□□ 0.52
YKL036C	YKL036C	RPL1B	P0CX44	217 aa	Known RBP	18.32	■□□□□ 0.52
YKL036C	YKL036C	RDS2	P19541	446 aa	Known RBP	18.32	■□□□□ 0.52
YKL036C	YKL036C	UBC6	P33296	250 aa	Predicted RBP	18.32	■□□□□ 0.52
YKL036C	YKL036C	MRP21	P38175	177 aa		18.32	■□□□□ 0.52
YKL036C	YKL036C	GND1	P38720	489 aa	Known RBP	18.32	■□□□□ 0.52
YKL036C	YKL036C	NMD5	P46970	1048 aa		18.32	■□□□□ 0.52
YKL036C	YKL036C	ACM1	Q08981	209 aa		18.32	■□□□□ 0.52
YKL036C	YKL036C	HSP60	P19882	572 aa	Known RBP	18.31	■□□□□ 0.52
YKL036C	YKL036C	ALG8	P40351	577 aa		18.31	■□□□□ 0.52
YKL036C	YKL036C	PET117	Q02771	107 aa		18.31	■□□□□ 0.52
YKL036C	YKL036C	BUD20	Q08004	166 aa	Predicted RBP	18.31	■□□□□ 0.52
YKL036C	YKL036C	RKM5	Q12367	367 aa		18.31	■□□□□ 0.52
YKL036C	YKL036C	GCR1	P07261	785 aa		18.3	■□□□□ 0.52
YKL036C	YKL036C	SPO16	P17122	198 aa		18.3	■□□□□ 0.52
YKL036C	YKL036C	PHO84	P25297	587 aa	Known RBP	18.3	■□□□□ 0.52
YKL036C	YKL036C	SPR1	P32603	445 aa		18.3	■□□□□ 0.52
YKL036C	YKL036C	BYE1	P36106	594 aa		18.3	■□□□□ 0.52
YKL036C	YKL036C	GMH1	P36125	273 aa		18.3	■□□□□ 0.52
YKL036C	YKL036C	REI1	P38344	393 aa	Predicted RBP	18.3	■□□□□ 0.52
YKL036C	YKL036C	SEO1	P39709	593 aa		18.3	■□□□□ 0.52
YKL036C	YKL036C	IME4	P41833	600 aa		18.3	■□□□□ 0.52
YKL036C	YKL036C	ATG36	P46983	293 aa		18.3	■□□□□ 0.52
YKL036C	YKL036C	BIR1	P47134	954 aa		18.3	■□□□□ 0.52
YKL036C	YKL036C	CCE1	Q03702	353 aa		18.3	■□□□□ 0.52
YKL036C	YKL036C	ARX1	Q03862	593 aa	Known RBP	18.3	■□□□□ 0.52
YKL036C	YKL036C	YDR444W	Q04093	687 aa		18.3	■□□□□ 0.52
YKL036C	YKL036C	BNA5	Q05979	453 aa		18.3	■□□□□ 0.52
YKL036C	YKL036C	YLR456W	Q06199	204 aa		18.3	■□□□□ 0.52
YKL036C	YKL036C	MRPL9	P31334	269 aa		18.29	■□□□□ 0.52
YKL036C	YKL036C	STB6	P36085	766 aa		18.29	■□□□□ 0.52
YKL036C	YKL036C	SLD7	Q08457	257 aa		18.29	■□□□□ 0.52
YKL036C	YKL036C	SEM1	O94742	89 aa		18.28	■□□□□ 0.52
YKL036C	YKL036C	RED1	P14291	827 aa		18.28	■□□□□ 0.52
YKL036C	YKL036C	URA10	P30402	227 aa		18.28	■□□□□ 0.52
YKL036C	YKL036C	YEL043W	P32618	956 aa		18.28	■□□□□ 0.52
YKL036C	YKL036C	PRP18	P33411	251 aa	Predicted RBP	18.28	■□□□□ 0.52
YKL036C	YKL036C	GTS1	P40956	396 aa		18.28	■□□□□ 0.52
YKL036C	YKL036C	NHX1	Q04121	633 aa		18.28	■□□□□ 0.52
YKL036C	YKL036C	PLB3	Q08108	686 aa		18.28	■□□□□ 0.52
YKL036C	YKL036C	HRK1	Q08732	759 aa	Known RBP	18.28	■□□□□ 0.52
YKL036C	YKL036C	CUP1-1	P0CX80	61 aa		18.27	■□□□□ 0.52
YKL036C	YKL036C	CUP1-2	P0CX81	61 aa		18.27	■□□□□ 0.52
YKL036C	YKL036C	INO1	P11986	533 aa		18.27	■□□□□ 0.52
YKL036C	YKL036C	TRM1	P15565	570 aa	Known RBP	18.27	■□□□□ 0.52
YKL036C	YKL036C	VAN1	P23642	535 aa		18.27	■□□□□ 0.52
YKL036C	YKL036C	CDC20	P26309	610 aa		18.27	■□□□□ 0.52
YKL036C	YKL036C	ACO2	P39533	789 aa		18.27	■□□□□ 0.52
YKL036C	YKL036C	NUP85	P46673	744 aa		18.27	■□□□□ 0.52
YKL036C	YKL036C	PEX8	P53248	589 aa		18.27	■□□□□ 0.52
YKL036C	YKL036C	YDR109C	Q04585	715 aa		18.27	■□□□□ 0.52
YKL036C	YKL036C	NUT2	Q06213	157 aa		18.27	■□□□□ 0.52
YKL036C	YKL036C	ERG20	P08524	352 aa	Known RBP	18.26	■□□□□ 0.51
YKL036C	YKL036C	PRP9	P19736	530 aa	Known RBP	18.26	■□□□□ 0.51
YKL036C	YKL036C	URA7	P28274	579 aa	Known RBP	18.26	■□□□□ 0.51
YKL036C	YKL036C	YFL012W	P43580	148 aa		18.26	■□□□□ 0.51
YKL036C	YKL036C	NAM8	Q00539	523 aa	Known RBP	18.26	■□□□□ 0.51
YKL036C	YKL036C	RCO1	Q04779	684 aa		18.26	■□□□□ 0.51
YKL036C	YKL036C	RIO1	Q12196	484 aa	Known RBP	18.26	■□□□□ 0.51
YKL036C	YKL036C	DPB3	P27344	201 aa		18.25	■□□□□ 0.51
YKL036C	YKL036C	ARH1	P48360	493 aa		18.25	■□□□□ 0.51
YKL036C	YKL036C	VTA1	Q06263	330 aa		18.25	■□□□□ 0.51
YKL036C	YKL036C	AMD1	P15274	810 aa	Known RBP	18.24	■□□□□ 0.51
YKL036C	YKL036C	SCL1	P21243	252 aa	Known RBP	18.24	■□□□□ 0.51
YKL036C	YKL036C	PPH21	P23594	369 aa		18.24	■□□□□ 0.51
YKL036C	YKL036C	YSW1	P38280	609 aa		18.24	■□□□□ 0.51
YKL036C	YKL036C	COG6	P53959	839 aa		18.24	■□□□□ 0.51
YKL036C	YKL036C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	18.24	■□□□□ 0.51	not detected
YKL036C	YKL036C	BLS1	Q06071	122 aa		18.24	■□□□□ 0.51
YKL036C	YKL036C	CUE5	Q08412	411 aa	Known RBP	18.24	■□□□□ 0.51
YKL036C	YKL036C	CMD1	P06787	147 aa	Known RBP	18.23	■□□□□ 0.51
YKL036C	YKL036C	CBF1	P17106	351 aa		18.23	■□□□□ 0.51
YKL036C	YKL036C	BEM1	P29366	551 aa		18.23	■□□□□ 0.51
YKL036C	YKL036C	TPS2	P31688	896 aa	Known RBP	18.23	■□□□□ 0.51

Retrieved 100 of 5,963 RNA–protein pairs in 54.1 ms