RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C YAT1P80235 687 aa3.69□□□□□ -1.82
ATG27YJL178C GEP3Q08622 556 aa3.69□□□□□ -1.82
ATG27YJL178C YOR389WQ08912 624 aa3.69□□□□□ -1.82
ATG27YJL178C SNF2P22082 1703 aa3.69□□□□□ -1.82
ATG27YJL178C YIL177CP40434 1758 aa3.68□□□□□ -1.82
ATG27YJL178C YJL225CP40889 1758 aa3.68□□□□□ -1.82
ATG27YJL178C PSK1P31374 1356 aa3.68□□□□□ -1.82
ATG27YJL178C AUS1Q08409 1394 aa3.68□□□□□ -1.82
ATG27YJL178C YAP1P19880 650 aaKnown RBP3.68□□□□□ -1.82
ATG27YJL178C COQ3P27680 312 aa3.68□□□□□ -1.82
ATG27YJL178C FSH1P38777 243 aaKnown RBP3.68□□□□□ -1.82
ATG27YJL178C UBP7P40453 1071 aa3.68□□□□□ -1.82
ATG27YJL178C CFD1P40558 293 aa3.68□□□□□ -1.82
ATG27YJL178C MPP10P47083 593 aaKnown RBP3.68□□□□□ -1.82
ATG27YJL178C PAP2P53632 584 aaKnown RBP3.68□□□□□ -1.82
ATG27YJL178C TRS130Q03660 1102 aa3.68□□□□□ -1.82
ATG27YJL178C SNU56Q03782 492 aaKnown RBP3.68□□□□□ -1.82
ATG27YJL178C CIR2Q08822 631 aa3.68□□□□□ -1.82
ATG27YJL178C RVB2Q12464 471 aaKnown RBP3.68□□□□□ -1.82
ATG27YJL178C TY4B-HP0C2J7 1802 aa3.67□□□□□ -1.82
ATG27YJL178C TY4B-JP47024 1803 aa3.67□□□□□ -1.82
ATG27YJL178C NUC1P08466 329 aa3.67□□□□□ -1.82
ATG27YJL178C YMR085WP0CF18 432 aa3.67□□□□□ -1.82
ATG27YJL178C BIK1P11709 440 aa3.67□□□□□ -1.82
ATG27YJL178C SUI2P20459 304 aaKnown RBP3.67□□□□□ -1.82
ATG27YJL178C ERV46P39727 415 aa3.67□□□□□ -1.82
ATG27YJL178C BUD16P39988 312 aa3.67□□□□□ -1.82
ATG27YJL178C PCI8P40512 444 aa3.67□□□□□ -1.82
ATG27YJL178C CIN1P40987 1014 aa3.67□□□□□ -1.82
ATG27YJL178C ZAP1P47043 880 aa3.67□□□□□ -1.82
ATG27YJL178C COP1P53622 1201 aaKnown RBP3.67□□□□□ -1.82
ATG27YJL178C MPS1P54199 764 aa3.67□□□□□ -1.82
ATG27YJL178C YDL144CQ07589 356 aa3.67□□□□□ -1.82
ATG27YJL178C GET3Q12154 354 aaKnown RBP3.67□□□□□ -1.82
ATG27YJL178C PCD1Q12524 340 aa3.67□□□□□ -1.82
ATG27YJL178C ILV2P07342 687 aaKnown RBP3.66□□□□□ -1.82
ATG27YJL178C GSH1P32477 678 aa3.66□□□□□ -1.82
ATG27YJL178C GCD7P32502 381 aaPredicted RBP3.66□□□□□ -1.82
ATG27YJL178C IES5P40060 125 aa3.66□□□□□ -1.82
ATG27YJL178C PSF2P40359 213 aa3.66□□□□□ -1.82
ATG27YJL178C YIL024CP40543 189 aa3.66□□□□□ -1.82
ATG27YJL178C YRB30P53107 440 aaPredicted RBP3.66□□□□□ -1.82
ATG27YJL178C YPL068CQ02749 293 aa3.66□□□□□ -1.82
ATG27YJL178C BLS1Q06071 122 aa3.66□□□□□ -1.82
ATG27YJL178C RRP5Q05022 1729 aaKnown RBP3.65□□□□□ -1.82
ATG27YJL178C YPR089WO13585 888 aa3.65□□□□□ -1.83
ATG27YJL178C RPS24AP0CX31 135 aaKnown RBP3.65□□□□□ -1.83
ATG27YJL178C RPS24BP0CX32 135 aaKnown RBP3.65□□□□□ -1.83
ATG27YJL178C YCL049CP25577 312 aa3.65□□□□□ -1.83
ATG27YJL178C LAC1P28496 418 aa3.65□□□□□ -1.83
ATG27YJL178C ASK1P35734 292 aa3.65□□□□□ -1.83
ATG27YJL178C IFA38P38286 347 aa3.65□□□□□ -1.83
ATG27YJL178C SKP2P42843 763 aa3.65□□□□□ -1.83
ATG27YJL178C YPR003CP53394 754 aa3.65□□□□□ -1.83
ATG27YJL178C VTC3Q02725 835 aa3.65□□□□□ -1.83
ATG27YJL178C MTG1Q03151 367 aaPredicted RBP3.65□□□□□ -1.83
ATG27YJL178C ATG16Q03818 150 aa3.65□□□□□ -1.83
ATG27YJL178C YDR109CQ04585 715 aa3.65□□□□□ -1.83
ATG27YJL178C MRPL1Q04599 285 aa3.65□□□□□ -1.83
ATG27YJL178C GTB1Q04924 702 aa3.65□□□□□ -1.83
ATG27YJL178C LEA1Q08963 238 aaPredicted RBP3.65□□□□□ -1.83
ATG27YJL178C COX17Q12287 69 aa3.65□□□□□ -1.83
ATG27YJL178C YML003WP0CF16 290 aa3.64□□□□□ -1.83
ATG27YJL178C PTC6P25646 442 aa3.64□□□□□ -1.83
ATG27YJL178C RFA2P26754 273 aaKnown RBP3.64□□□□□ -1.83
ATG27YJL178C HES1P35843 434 aa3.64□□□□□ -1.83
ATG27YJL178C TOM71P38825 639 aaKnown RBP3.64□□□□□ -1.83
ATG27YJL178C YMR124WP39523 943 aaKnown RBP3.64□□□□□ -1.83
ATG27YJL178C FAF1P40546 346 aaPredicted RBP3.64□□□□□ -1.83
ATG27YJL178C UBX6P47049 396 aa3.64□□□□□ -1.83
ATG27YJL178C ORC5P50874 479 aa3.64□□□□□ -1.83
ATG27YJL178C SCW4P53334 386 aaKnown RBP3.64□□□□□ -1.83
ATG27YJL178C MRPL13Q02204 264 aa3.64□□□□□ -1.83
ATG27YJL178C ADE6P38972 1358 aaKnown RBP3.63□□□□□ -1.83
ATG27YJL178C YER190C-BP0CX94 160 aa3.63□□□□□ -1.83
ATG27YJL178C YEL077W-AP0CX95 160 aa3.63□□□□□ -1.83
ATG27YJL178C YGR296C-BP0CX96 160 aa3.63□□□□□ -1.83
ATG27YJL178C YPL283W-BP0CX97 160 aa3.63□□□□□ -1.83
ATG27YJL178C YPR204C-AP0CX98 160 aa3.63□□□□□ -1.83
ATG27YJL178C FUI1P38196 639 aa3.63□□□□□ -1.83
ATG27YJL178C EXO84P38261 753 aa3.63□□□□□ -1.83
ATG27YJL178C RTR1P40084 226 aaPredicted RBP3.63□□□□□ -1.83
ATG27YJL178C RRT6P53117 311 aaPredicted RBP3.63□□□□□ -1.83
ATG27YJL178C ADE16P54113 591 aaKnown RBP3.63□□□□□ -1.83
ATG27YJL178C VAM6Q07468 1049 aa3.63□□□□□ -1.83
ATG27YJL178C CDC45Q08032 650 aa3.63□□□□□ -1.83
ATG27YJL178C PFA4Q12006 378 aa3.63□□□□□ -1.83
ATG27YJL178C YRF1-2P40105 1681 aa3.62□□□□□ -1.83
ATG27YJL178C APC1P53886 1748 aa3.62□□□□□ -1.83
ATG27YJL178C ATP2P00830 511 aaKnown RBP3.62□□□□□ -1.83
ATG27YJL178C RPP0P05317 312 aaKnown RBP3.62□□□□□ -1.83
ATG27YJL178C MTF2P10849 440 aa3.62□□□□□ -1.83
ATG27YJL178C UBC1P21734 215 aaKnown RBP3.62□□□□□ -1.83
ATG27YJL178C YSP3P25036 478 aa3.62□□□□□ -1.83
ATG27YJL178C PRD1P25375 712 aa3.62□□□□□ -1.83
ATG27YJL178C MSS51P32335 436 aa3.62□□□□□ -1.83
ATG27YJL178C MRS6P32864 603 aaKnown RBP3.62□□□□□ -1.83
ATG27YJL178C PTH2P34222 208 aa3.62□□□□□ -1.83
ATG27YJL178C VPS24P36095 224 aaKnown RBP3.62□□□□□ -1.83
ATG27YJL178C GEX2P36173 615 aa3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms