RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	CDC26	P14724	124 aa		5.58	□□□□□ -1.52
RSC30	YHR056C	KAR3	P17119	729 aa		5.58	□□□□□ -1.52
RSC30	YHR056C	MRS6	P32864	603 aa	Known RBP	5.58	□□□□□ -1.52
RSC30	YHR056C	MIP6	P38760	659 aa	Known RBP	5.58	□□□□□ -1.52
RSC30	YHR056C	SER3	P40054	469 aa		5.58	□□□□□ -1.52
RSC30	YHR056C	RGD2	P43556	714 aa		5.58	□□□□□ -1.52
RSC30	YHR056C	SGF73	P53165	657 aa		5.58	□□□□□ -1.52
RSC30	YHR056C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.58	□□□□□ -1.52	RIP-Chip
RSC30	YHR056C	YNL040W	P53960	456 aa	Predicted RBP	5.58	□□□□□ -1.52
RSC30	YHR056C	SYH1	Q02875	849 aa	Known RBP	5.58	□□□□□ -1.52
RSC30	YHR056C	HUA2	Q12134	243 aa		5.58	□□□□□ -1.52
RSC30	YHR056C	APC11	Q12157	165 aa		5.58	□□□□□ -1.52
RSC30	YHR056C	YPT1	P01123	206 aa	Known RBP	5.58	□□□□□ -1.52
RSC30	YHR056C	CYT1	P07143	309 aa		5.58	□□□□□ -1.52
RSC30	YHR056C	SPS1	P08458	490 aa		5.58	□□□□□ -1.52
RSC30	YHR056C	DCC1	P25559	380 aa		5.58	□□□□□ -1.52
RSC30	YHR056C	YCL042W	P25572	119 aa		5.58	□□□□□ -1.52
RSC30	YHR056C	YEL073C	P39974	107 aa		5.58	□□□□□ -1.52
RSC30	YHR056C	VNX1	P42839	908 aa		5.58	□□□□□ -1.52
RSC30	YHR056C	YFR020W	P43600	232 aa		5.58	□□□□□ -1.52
RSC30	YHR056C	RPC17	P47076	161 aa		5.58	□□□□□ -1.52
RSC30	YHR056C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5.58	□□□□□ -1.52	not detected
RSC30	YHR056C	MSB1	P21339	1137 aa	Known RBP	5.57	□□□□□ -1.52
RSC30	YHR056C	ORC2	P32833	620 aa		5.57	□□□□□ -1.52
RSC30	YHR056C	YRO2	P38079	344 aa		5.57	□□□□□ -1.52
RSC30	YHR056C	YBR259W	P38338	688 aa		5.57	□□□□□ -1.52
RSC30	YHR056C	BEM4	P39011	633 aa		5.57	□□□□□ -1.52
RSC30	YHR056C	PAC1	P39946	494 aa	Known RBP	5.57	□□□□□ -1.52
RSC30	YHR056C	HST3	P53687	447 aa		5.57	□□□□□ -1.52
RSC30	YHR056C	IVY1	Q04934	453 aa		5.57	□□□□□ -1.52
RSC30	YHR056C	NUT2	Q06213	157 aa		5.57	□□□□□ -1.52
RSC30	YHR056C	HDA3	Q06623	655 aa		5.57	□□□□□ -1.52
RSC30	YHR056C	IRC13	Q08630	104 aa		5.57	□□□□□ -1.52
RSC30	YHR056C	YOR012W	Q12351	137 aa		5.57	□□□□□ -1.52
RSC30	YHR056C	RPS6A	P0CX37	236 aa	Known RBP	5.57	□□□□□ -1.52
RSC30	YHR056C	RPS6B	P0CX38	236 aa	Predicted RBP	5.57	□□□□□ -1.52
RSC30	YHR056C	YSP3	P25036	478 aa		5.57	□□□□□ -1.52
RSC30	YHR056C	RBK1	P25332	333 aa		5.57	□□□□□ -1.52
RSC30	YHR056C	RPC25	P35718	212 aa		5.57	□□□□□ -1.52
RSC30	YHR056C	TRF5	P48561	642 aa	Known RBP	5.57	□□□□□ -1.52
RSC30	YHR056C	RLI1	Q03195	608 aa	Known RBP	5.57	□□□□□ -1.52
RSC30	YHR056C	RRP45	Q05636	305 aa	Known RBP	5.57	□□□□□ -1.52
RSC30	YHR056C	MCA1	Q08601	432 aa		5.57	□□□□□ -1.52
RSC30	YHR056C	COX5A	P00424	153 aa		5.56	□□□□□ -1.52
RSC30	YHR056C	CLC1	P17891	233 aa		5.56	□□□□□ -1.52
RSC30	YHR056C	SFA1	P32771	386 aa		5.56	□□□□□ -1.52
RSC30	YHR056C	GPI16	P38875	610 aa		5.56	□□□□□ -1.52
RSC30	YHR056C	SMC2	P38989	1170 aa	Known RBP	5.56	□□□□□ -1.52
RSC30	YHR056C	LYS1	P38998	373 aa	RIP-Chip data	5.56	□□□□□ -1.52	not detected
RSC30	YHR056C	IME4	P41833	600 aa		5.56	□□□□□ -1.52
RSC30	YHR056C	YPR003C	P53394	754 aa		5.56	□□□□□ -1.52
RSC30	YHR056C	ATG16	Q03818	150 aa		5.56	□□□□□ -1.52
RSC30	YHR056C	ARX1	Q03862	593 aa	Known RBP	5.56	□□□□□ -1.52
RSC30	YHR056C	THI7	Q05998	598 aa		5.56	□□□□□ -1.52
RSC30	YHR056C	PMS1	P14242	873 aa		5.56	□□□□□ -1.52
RSC30	YHR056C	ATG15	P25641	520 aa		5.56	□□□□□ -1.52
RSC30	YHR056C	MCM2	P29469	868 aa		5.56	□□□□□ -1.52
RSC30	YHR056C	MKK1	P32490	508 aa		5.56	□□□□□ -1.52
RSC30	YHR056C	MKK2	P32491	506 aa		5.56	□□□□□ -1.52
RSC30	YHR056C	YET1	P35723	206 aa		5.56	□□□□□ -1.52
RSC30	YHR056C	KHA1	P40309	873 aa		5.56	□□□□□ -1.52
RSC30	YHR056C	YIL086C	P40503	102 aa		5.56	□□□□□ -1.52
RSC30	YHR056C	MPC54	Q08550	464 aa		5.56	□□□□□ -1.52
RSC30	YHR056C	LAT1	P12695	482 aa	Known RBP	5.55	□□□□□ -1.52
RSC30	YHR056C	RPC31	P17890	251 aa		5.55	□□□□□ -1.52
RSC30	YHR056C	CLN1	P20437	546 aa		5.55	□□□□□ -1.52
RSC30	YHR056C	GSY2	P27472	705 aa		5.55	□□□□□ -1.52
RSC30	YHR056C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5.55	□□□□□ -1.52	not detected
RSC30	YHR056C	TRM7	P38238	310 aa	Known RBP	5.55	□□□□□ -1.52
RSC30	YHR056C	OTU2	P38747	307 aa	Known RBP	5.55	□□□□□ -1.52
RSC30	YHR056C	SPC72	P39723	622 aa		5.55	□□□□□ -1.52
RSC30	YHR056C	RGI2	P40188	164 aa		5.55	□□□□□ -1.52
RSC30	YHR056C	ESF2	P53743	316 aa	Known RBP	5.55	□□□□□ -1.52
RSC30	YHR056C	SIW14	P53965	281 aa		5.55	□□□□□ -1.52
RSC30	YHR056C	BET4	Q00618	327 aa		5.55	□□□□□ -1.52
RSC30	YHR056C	NRT1	Q08485	598 aa		5.55	□□□□□ -1.52
RSC30	YHR056C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.55	□□□□□ -1.52	not detected
RSC30	YHR056C	PFA4	Q12006	378 aa		5.55	□□□□□ -1.52
RSC30	YHR056C	YOL107W	Q12239	342 aa		5.55	□□□□□ -1.52
RSC30	YHR056C	STT4	P37297	1900 aa		5.55	□□□□□ -1.52
RSC30	YHR056C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	5.55	□□□□□ -1.52	not detected
RSC30	YHR056C	SRB5	P32585	307 aa		5.55	□□□□□ -1.52
RSC30	YHR056C	RRM3	P38766	723 aa		5.55	□□□□□ -1.52
RSC30	YHR056C	GID8	P40208	455 aa		5.55	□□□□□ -1.52
RSC30	YHR056C	ELP2	P42935	788 aa		5.55	□□□□□ -1.52
RSC30	YHR056C	CSN12	P47130	423 aa		5.55	□□□□□ -1.52
RSC30	YHR056C	PAN2	P53010	1115 aa	Predicted RBP	5.55	□□□□□ -1.52
RSC30	YHR056C	ARE2	P53629	642 aa	Known RBP	5.55	□□□□□ -1.52
RSC30	YHR056C	NGL3	Q03210	505 aa		5.55	□□□□□ -1.52
RSC30	YHR056C	RCO1	Q04779	684 aa		5.55	□□□□□ -1.52
RSC30	YHR056C	MDM30	Q05930	598 aa		5.55	□□□□□ -1.52
RSC30	YHR056C	MCD1	Q12158	566 aa		5.55	□□□□□ -1.52
RSC30	YHR056C	HOP1	P20050	605 aa		5.54	□□□□□ -1.52
RSC30	YHR056C	VPS34	P22543	875 aa		5.54	□□□□□ -1.52
RSC30	YHR056C	GRR1	P24814	1151 aa		5.54	□□□□□ -1.52
RSC30	YHR056C	HEM12	P32347	362 aa	Predicted RBP	5.54	□□□□□ -1.52
RSC30	YHR056C	YDR132C	Q03900	495 aa		5.54	□□□□□ -1.52
RSC30	YHR056C	NEW1	Q08972	1196 aa	Known RBP	5.54	□□□□□ -1.52
RSC30	YHR056C	SWI5	P08153	709 aa		5.54	□□□□□ -1.52
RSC30	YHR056C	TUP1	P16649	713 aa		5.54	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms